CircRNA Information

General Information
circRNA Basic Information
CircID chr5:150410096|150410298
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CAGACAGGAAGGGAAAACAAATTCTACTTCTTGGCCTTCTCAAGGAACACGGGTGGCCTAGCCTGTGTTCAGGCTCTCCAGCCTCATCCTCCACCTGTTCAGTGCTTCTGCAACCCCACACCCAATTCTAGCCCCAGCTCTACCTCCCACACACGACATGGGACAGTACCTTCCCCTCTCTGCACCACAGTTCCTCAGGAGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:150410096|150410298 hsa-let-7b-5p 0 0 1
chr5:150410096|150410298 hsa-let-7b-3p 0 0 1
chr5:150410096|150410298 hsa-let-7c-5p 0 0 1
chr5:150410096|150410298 hsa-let-7c-3p 0 0 1
chr5:150410096|150410298 hsa-let-7d-5p 0 0 1
chr5:150410096|150410298 hsa-let-7d-3p 0 0 1
chr5:150410096|150410298 hsa-let-7e-5p 0 0 1
chr5:150410096|150410298 hsa-let-7e-3p 0 0 1
chr5:150410096|150410298 hsa-miR-98-5p 0 0 1
chr5:150410096|150410298 hsa-miR-98-3p 0 0 1
chr5:150410096|150410298 hsa-miR-204-5p 0 0 1
chr5:150410096|150410298 hsa-miR-204-3p 0 0 1
chr5:150410096|150410298 hsa-miR-211-5p 0 0 1
chr5:150410096|150410298 hsa-miR-211-3p 0 0 1
chr5:150410096|150410298 hsa-let-7g-5p 0 0 1
chr5:150410096|150410298 hsa-let-7g-3p 0 0 1
chr5:150410096|150410298 hsa-let-7i-5p 0 0 1
chr5:150410096|150410298 hsa-let-7i-3p 0 0 1
chr5:150410096|150410298 hsa-miR-185-5p 0 0 1
chr5:150410096|150410298 hsa-miR-185-3p 0 0 1
chr5:150410096|150410298 hsa-miR-552-5p 0 0 1
chr5:150410096|150410298 hsa-miR-552-3p 0 0 1
chr5:150410096|150410298 hsa-miR-580-5p 0 0 1
chr5:150410096|150410298 hsa-miR-580-3p 0 0 1
chr5:150410096|150410298 hsa-miR-609 0 0 1
chr5:150410096|150410298 hsa-miR-623 0 0 1
chr5:150410096|150410298 hsa-miR-765 0 0 1
chr5:150410096|150410298 hsa-miR-298 1 1 1
chr5:150410096|150410298 hsa-miR-1200 0 1 1
chr5:150410096|150410298 hsa-miR-1253 0 0 1
chr5:150410096|150410298 hsa-miR-1255a 0 0 1
chr5:150410096|150410298 hsa-miR-1262 1 0 1
chr5:150410096|150410298 hsa-miR-491-5p 0 0 1
chr5:150410096|150410298 hsa-miR-485-5p 0 1 1
chr5:150410096|150410298 hsa-miR-502-5p 0 0 1
chr5:150410096|150410298 hsa-miR-1255b 0 0 1
chr5:150410096|150410298 hsa-miR-644 0 0 1
chr5:150410096|150410298 hsa-let-7a 0 0 1
chr5:150410096|150410298 hsa-let-7f 0 0 1
chr5:150410096|150410298 hsa-miR-1300 0 0 1
chr5:150410096|150410298 hsa-miR-147 0 0 1
chr5:150410096|150410298 hsa-miR-762 1 0 0
chr5:150410096|150410298 hsa-miR-920 1 0 0
chr5:150410096|150410298 hsa-miR-1299 1 0 0
chr5:150410096|150410298 hsa-miR-1268a 1 0 0
chr5:150410096|150410298 hsa-miR-1275 1 1 0
chr5:150410096|150410298 hsa-miR-2861 1 0 0
chr5:150410096|150410298 hsa-miR-3132 1 1 0
chr5:150410096|150410298 hsa-miR-3138 1 0 0
chr5:150410096|150410298 hsa-miR-4297 0 1 0
chr5:150410096|150410298 hsa-miR-4322 1 0 0
chr5:150410096|150410298 hsa-miR-4259 1 1 0
chr5:150410096|150410298 hsa-miR-4260 1 0 0
chr5:150410096|150410298 hsa-miR-3652 1 1 0
chr5:150410096|150410298 hsa-miR-3665 1 0 0
chr5:150410096|150410298 hsa-miR-3911 1 0 0
chr5:150410096|150410298 hsa-miR-1268b 1 0 0
chr5:150410096|150410298 hsa-miR-378g 1 0 0
chr5:150410096|150410298 hsa-miR-4429 1 0 0
chr5:150410096|150410298 hsa-miR-4451 1 1 0
chr5:150410096|150410298 hsa-miR-4458 0 1 0
chr5:150410096|150410298 hsa-miR-3135b 1 0 0
chr5:150410096|150410298 hsa-miR-4466 1 0 0
chr5:150410096|150410298 hsa-miR-3689c 1 1 0
chr5:150410096|150410298 hsa-miR-4487 1 0 0
chr5:150410096|150410298 hsa-miR-4489 1 1 0
chr5:150410096|150410298 hsa-miR-4492 1 0 0
chr5:150410096|150410298 hsa-miR-4493 1 0 0
chr5:150410096|150410298 hsa-miR-4498 1 0 0
chr5:150410096|150410298 hsa-miR-4505 1 0 0
chr5:150410096|150410298 hsa-miR-2392 1 1 0
chr5:150410096|150410298 hsa-miR-1587 1 0 0
chr5:150410096|150410298 hsa-miR-4539 1 0 0
chr5:150410096|150410298 hsa-miR-4651 1 0 0
chr5:150410096|150410298 hsa-miR-4654 1 0 0
chr5:150410096|150410298 hsa-miR-4656 1 0 0
chr5:150410096|150410298 hsa-miR-4689 1 0 0
chr5:150410096|150410298 hsa-miR-4710 1 0 0
chr5:150410096|150410298 hsa-miR-4739 1 1 0
chr5:150410096|150410298 hsa-miR-4741 1 0 0
chr5:150410096|150410298 hsa-miR-4748 1 0 0
chr5:150410096|150410298 hsa-miR-5572 1 0 0
chr5:150410096|150410298 hsa-miR-5787 1 0 0
chr5:150410096|150410298 hsa-miR-6077 1 0 0
chr5:150410096|150410298 hsa-miR-6125 1 0 0
chr5:150410096|150410298 hsa-miR-6127 1 0 0
chr5:150410096|150410298 hsa-miR-6129 1 0 0
chr5:150410096|150410298 hsa-miR-6132 1 0 0
chr5:150410096|150410298 hsa-miR-6133 1 0 0
chr5:150410096|150410298 hsa-miR-6165 1 0 0
chr5:150410096|150410298 hsa-miR-8052 1 0 0
chr5:150410096|150410298 hsa-miR-8082 1 0 0
chr5:150410096|150410298 hsa-miR-8089 1 0 0
chr5:150410096|150410298 hsa-miR-12114 1 1 0
chr5:150410096|150410298 hsa-miR-12115 1 0 0
chr5:150410096|150410298 hsa-miR-12119 1 0 0
chr5:150410096|150410298 hsa-miR-150-3p 1 0 0
chr5:150410096|150410298 hsa-miR-4433b-3p 1 0 0
chr5:150410096|150410298 hsa-miR-6734-5p 1 0 0
chr5:150410096|150410298 hsa-miR-4731-5p 1 0 0
chr5:150410096|150410298 hsa-miR-7155-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6747-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6765-5p 1 0 0
chr5:150410096|150410298 hsa-miR-671-5p 1 0 0
chr5:150410096|150410298 hsa-miR-125b-1-3p 1 0 0
chr5:150410096|150410298 hsa-miR-7106-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6825-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6894-5p 1 1 0
chr5:150410096|150410298 hsa-miR-125a-3p 1 0 0
chr5:150410096|150410298 hsa-miR-6799-5p 1 1 0
chr5:150410096|150410298 hsa-miR-6510-5p 1 0 0
chr5:150410096|150410298 hsa-miR-3934-5p 1 0 0
chr5:150410096|150410298 hsa-miR-1227-5p 1 0 0
chr5:150410096|150410298 hsa-miR-7114-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6515-5p 0 1 0
chr5:150410096|150410298 hsa-miR-6089 1 0 0
chr5:150410096|150410298 hsa-miR-3192-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6880-5p 1 1 0
chr5:150410096|150410298 hsa-miR-7847-3p 1 1 0
chr5:150410096|150410298 hsa-miR-6867-5p 1 1 0
chr5:150410096|150410298 hsa-miR-4722-5p 1 1 0
chr5:150410096|150410298 hsa-miR-6730-5p 1 0 0
chr5:150410096|150410298 hsa-miR-7154-3p 1 0 0
chr5:150410096|150410298 hsa-miR-4753-5p 1 1 0
chr5:150410096|150410298 hsa-miR-3928-3p 1 1 0
chr5:150410096|150410298 hsa-miR-6759-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6721-5p 1 0 0
chr5:150410096|150410298 hsa-miR-197-5p 1 0 0
chr5:150410096|150410298 hsa-miR-5589-5p 1 0 0
chr5:150410096|150410298 hsa-miR-7845-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6783-5p 0 1 0
chr5:150410096|150410298 hsa-miR-3151-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6748-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6772-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6796-5p 1 1 0
chr5:150410096|150410298 hsa-miR-3190-3p 1 0 0
chr5:150410096|150410298 hsa-miR-6798-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6881-5p 1 0 0
chr5:150410096|150410298 hsa-miR-2467-3p 1 0 0
chr5:150410096|150410298 hsa-miR-6782-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6874-5p 1 0 0
chr5:150410096|150410298 hsa-miR-30b-3p 1 1 0
chr5:150410096|150410298 hsa-miR-6850-5p 1 1 0
chr5:150410096|150410298 hsa-miR-6835-5p 1 0 0
chr5:150410096|150410298 hsa-miR-7109-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6740-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6784-5p 1 0 0
chr5:150410096|150410298 hsa-miR-4690-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6516-5p 1 0 0
chr5:150410096|150410298 hsa-miR-4732-5p 1 1 0
chr5:150410096|150410298 hsa-miR-6834-5p 1 0 0
chr5:150410096|150410298 hsa-miR-299-3p 1 0 0
chr5:150410096|150410298 hsa-miR-3160-3p 1 0 0
chr5:150410096|150410298 hsa-miR-4446-3p 1 0 0
chr5:150410096|150410298 hsa-miR-149-3p 1 0 0
chr5:150410096|150410298 hsa-miR-202-3p 1 0 0
chr5:150410096|150410298 hsa-miR-6802-5p 1 0 0
chr5:150410096|150410298 hsa-miR-664b-5p 1 0 0
chr5:150410096|150410298 hsa-miR-3922-5p 1 0 0
chr5:150410096|150410298 hsa-miR-4724-5p 0 1 0
chr5:150410096|150410298 hsa-miR-4773 1 0 0
chr5:150410096|150410298 hsa-miR-6832-5p 0 1 0
chr5:150410096|150410298 hsa-miR-3675-5p 1 0 0
chr5:150410096|150410298 hsa-miR-1207-5p 1 0 0
chr5:150410096|150410298 hsa-miR-1233-5p 1 1 0
chr5:150410096|150410298 hsa-miR-1273h-5p 1 1 0
chr5:150410096|150410298 hsa-miR-3689b-3p 1 1 0
chr5:150410096|150410298 hsa-miR-4763-3p 1 0 0
chr5:150410096|150410298 hsa-miR-6769b-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6778-5p 1 1 0
chr5:150410096|150410298 hsa-miR-6787-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6812-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6816-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6870-5p 1 0 0
chr5:150410096|150410298 hsa-miR-1343-5p 1 0 0
chr5:150410096|150410298 hsa-miR-5001-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6726-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6756-5p 1 1 0
chr5:150410096|150410298 hsa-miR-6803-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6851-5p 1 1 0
chr5:150410096|150410298 hsa-miR-10401-5p 1 1 0
chr5:150410096|150410298 hsa-miR-11181-3p 1 0 0
chr5:150410096|150410298 hsa-miR-1249-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6751-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6763-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6779-5p 1 1 0
chr5:150410096|150410298 hsa-miR-6780a-5p 1 1 0
chr5:150410096|150410298 hsa-miR-6788-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6875-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6879-5p 1 0 0
chr5:150410096|150410298 hsa-miR-7111-5p 1 0 0
chr5:150410096|150410298 hsa-miR-3620-5p 1 0 0
chr5:150410096|150410298 hsa-miR-4728-5p 1 0 0
chr5:150410096|150410298 hsa-miR-5196-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6780b-5p 1 0 0
chr5:150410096|150410298 hsa-miR-1909-3p 1 0 0
chr5:150410096|150410298 hsa-miR-328-5p 1 0 0
chr5:150410096|150410298 hsa-miR-3689a-3p 1 1 0
chr5:150410096|150410298 hsa-miR-4701-3p 1 0 0
chr5:150410096|150410298 hsa-miR-4725-3p 1 1 0
chr5:150410096|150410298 hsa-miR-4726-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6738-5p 1 0 0
chr5:150410096|150410298 hsa-miR-675-5p 1 1 0
chr5:150410096|150410298 hsa-miR-6794-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6848-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6858-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6883-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6831-5p 1 1 0
chr5:150410096|150410298 hsa-miR-6845-5p 1 0 0
chr5:150410096|150410298 hsa-miR-939-5p 1 0 0
chr5:150410096|150410298 hsa-miR-4758-5p 1 0 0
chr5:150410096|150410298 hsa-miR-4769-5p 1 0 0
chr5:150410096|150410298 hsa-miR-365a-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6731-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6758-5p 1 1 0
chr5:150410096|150410298 hsa-miR-6856-5p 1 1 0
chr5:150410096|150410298 hsa-miR-1914-3p 1 0 0
chr5:150410096|150410298 hsa-miR-6855-5p 1 1 0
chr5:150410096|150410298 hsa-miR-4700-5p 1 0 0
chr5:150410096|150410298 hsa-miR-4472 1 1 0
chr5:150410096|150410298 hsa-miR-6785-5p 1 0 0
chr5:150410096|150410298 hsa-miR-4667-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6790-5p 1 0 0
chr5:150410096|150410298 hsa-miR-5591-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6791-5p 1 0 0
chr5:150410096|150410298 hsa-miR-3529-5p 1 0 0
chr5:150410096|150410298 hsa-miR-320a-3p 1 0 0
chr5:150410096|150410298 hsa-miR-320b 1 0 0
chr5:150410096|150410298 hsa-miR-320c 1 0 0
chr5:150410096|150410298 hsa-miR-6859-5p 1 0 0
chr5:150410096|150410298 hsa-miR-6884-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr5:150410096|150410298
ORF Type ORF1
Protein Length 57
Nucleotide Length 171
Protein Sequence MAFSRNTGGLACVQALQPHPPPVQCFCNPTPNSSPSSTSHTRHGTVPSPLCTTVPQE
Nucleotide Sequence TTGGCCTTCTCAAGGAACACGGGTGGCCTAGCCTGTGTTCAGGCTCTCCAGCCTCATCCTCCACCTGTTCAGTGCTTCTGCAACCCCACACCCAATTCTAGCCCCAGCTCTACCTCCCACACACGACATGGGACAGTACCTTCCCCTCTCTGCACCACAGTTCCTCAGGAG
CircID chr5:150410096|150410298
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MFSASATPHPILAPALPPTHDMGQYLPLSAPQFLRR
Nucleotide Sequence CTGTTCAGTGCTTCTGCAACCCCACACCCAATTCTAGCCCCAGCTCTACCTCCCACACACGACATGGGACAGTACCTTCCCCTCTCTGCACCACAGTTCCTCAGGAGG
CircID chr5:150410096|150410298
ORF Type ORF3
Protein Length 46
Nucleotide Length 141
Protein Sequence MRNCGAERGRYCPMSCVGGRAGARIGCGVAEALNRWRMRLESLNTG
Nucleotide Sequence CTGAGGAACTGTGGTGCAGAGAGGGGAAGGTACTGTCCCATGTCGTGTGTGGGAGGTAGAGCTGGGGCTAGAATTGGGTGTGGGGTTGCAGAAGCACTGAACAGGTGGAGGATGAGGCTGGAGAGCCTGAACACAGGCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab