CircRNA Information

General Information
circRNA Basic Information
CircID chr5:150556158|150556299
Strand +
CircType exon
Host Gene ENSG00000070614.13;
Algorism CIRI2;
Sequence CACAGAAGGCTCTGGAACTCTGAATGACTGAGGCAGCTGCAGGTGACACTCGCACCTGCACCCACCCTGGGGCAAAGGCTCATGGAGGGGACCACAGAATAGACGATGGAGCCACCTGAACAATTTCAGTTATTTCTCTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:150556158|150556299 hsa-miR-22-5p 0 0 1
chr5:150556158|150556299 hsa-miR-22-3p 0 0 1
chr5:150556158|150556299 hsa-miR-539-5p 0 0 1
chr5:150556158|150556299 hsa-miR-539-3p 0 0 1
chr5:150556158|150556299 hsa-miR-597-5p 0 0 1
chr5:150556158|150556299 hsa-miR-597-3p 0 0 1
chr5:150556158|150556299 hsa-miR-657 0 0 1
chr5:150556158|150556299 hsa-miR-1301-5p 0 0 1
chr5:150556158|150556299 hsa-miR-1301-3p 0 0 1
chr5:150556158|150556299 hsa-miR-1237-5p 0 0 1
chr5:150556158|150556299 hsa-miR-1237-3p 0 0 1
chr5:150556158|150556299 hsa-miR-125a-3p 1 0 1
chr5:150556158|150556299 hsa-miR-1184 0 0 1
chr5:150556158|150556299 hsa-miR-525-5p 0 0 1
chr5:150556158|150556299 hsa-miR-520a-5p 0 0 1
chr5:150556158|150556299 hsa-miR-133b 1 0 0
chr5:150556158|150556299 hsa-miR-764 1 0 0
chr5:150556158|150556299 hsa-miR-3665 0 1 0
chr5:150556158|150556299 hsa-miR-4651 0 1 0
chr5:150556158|150556299 hsa-miR-4682 1 0 0
chr5:150556158|150556299 hsa-miR-5047 0 1 0
chr5:150556158|150556299 hsa-miR-6070 1 0 0
chr5:150556158|150556299 hsa-miR-149-5p 1 0 0
chr5:150556158|150556299 hsa-miR-6822-3p 1 0 0
chr5:150556158|150556299 hsa-miR-6746-5p 1 0 0
chr5:150556158|150556299 hsa-miR-6741-5p 0 1 0
chr5:150556158|150556299 hsa-miR-423-3p 1 0 0
chr5:150556158|150556299 hsa-miR-4655-3p 1 0 0
chr5:150556158|150556299 hsa-miR-6882-3p 1 0 0
chr5:150556158|150556299 hsa-miR-6887-3p 0 1 0
chr5:150556158|150556299 hsa-miR-208a-5p 0 1 0
chr5:150556158|150556299 hsa-miR-501-5p 0 1 0
chr5:150556158|150556299 hsa-miR-382-5p 0 1 0
chr5:150556158|150556299 hsa-miR-1298-5p 0 1 0
chr5:150556158|150556299 hsa-miR-133a-3p 1 0 0
chr5:150556158|150556299 hsa-miR-26a-1-3p 0 1 0
chr5:150556158|150556299 hsa-miR-6769b-5p 0 1 0
chr5:150556158|150556299 hsa-miR-6756-5p 0 1 0
chr5:150556158|150556299 hsa-miR-6769a-5p 0 1 0
chr5:150556158|150556299 hsa-miR-6815-5p 1 0 0
chr5:150556158|150556299 hsa-miR-3085-5p 1 0 0
chr5:150556158|150556299 hsa-miR-6766-5p 0 1 0
chr5:150556158|150556299 hsa-miR-10398-5p 1 0 0
chr5:150556158|150556299 hsa-miR-7107-3p 1 0 0
chr5:150556158|150556299 hsa-miR-6764-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr5:150556158|150556299
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MHPPWGKGSWRGPQNRRWSHLNNFSYFSL
Nucleotide Sequence CTGCACCCACCCTGGGGCAAAGGCTCATGGAGGGGACCACAGAATAGACGATGGAGCCACCTGAACAATTTCAGTTATTTCTCTCTC

CircID chr5:150556158|150556299
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MTEAAAGDTRTCTHPGAKAHGGDHRIDDGAT
Nucleotide Sequence ATGACTGAGGCAGCTGCAGGTGACACTCGCACCTGCACCCACCCTGGGGCAAAGGCTCATGGAGGGGACCACAGAATAGACGATGGAGCCACCTGA

CircID chr5:150556158|150556299
ORF Type ORF3
Protein Length 43
Nucleotide Length 129
Protein Sequence MKLFRWLHRLFCGPLHEPLPQGGCRCECHLQLPQSFRVPEPSV
Nucleotide Sequence CTGAAATTGTTCAGGTGGCTCCATCGTCTATTCTGTGGTCCCCTCCATGAGCCTTTGCCCCAGGGTGGGTGCAGGTGCGAGTGTCACCTGCAGCTGCCTCAGTCATTCAGAGTTCCAGAGCCTTCTGTG

CircID chr5:150556158|150556299
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MSLCPRVGAGASVTCSCLSHSEFQSLL
Nucleotide Sequence ATGAGCCTTTGCCCCAGGGTGGGTGCAGGTGCGAGTGTCACCTGCAGCTGCCTCAGTCATTCAGAGTTCCAGAGCCTTCTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites