CircRNA Information

General Information
circRNA Basic Information
CircID chr5:150557292|150557482
Strand -
CircType exon
Host Gene ENSG00000070614.13;
Algorism CIRI2;
Sequence CCTGGGGATGGGCCACAGGGCACCAAACACATCATATGTCTCTCTCTTTCTATTTTGGGGTCCCAGGGTTTTCATTTCCTGGAGACCCGTGGTCTGTGTGCACTGGAGCAGAGCCAGGCTCTCAGTTGCAGCAGGGAAAAGCCTACATGGGGAACTGCCTCCCGCAAGCTGTGGTGTGAGAAGAGCCCTGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:150557292|150557482 hsa-miR-148a-5p 0 0 1
chr5:150557292|150557482 hsa-miR-148a-3p 0 0 1
chr5:150557292|150557482 hsa-miR-152-5p 0 0 1
chr5:150557292|150557482 hsa-miR-152-3p 0 0 1
chr5:150557292|150557482 hsa-miR-149-5p 0 0 1
chr5:150557292|150557482 hsa-miR-149-3p 0 0 1
chr5:150557292|150557482 hsa-miR-370-5p 0 0 1
chr5:150557292|150557482 hsa-miR-370-3p 0 0 1
chr5:150557292|150557482 hsa-miR-148b-5p 0 0 1
chr5:150557292|150557482 hsa-miR-148b-3p 0 0 1
chr5:150557292|150557482 hsa-miR-570-5p 0 0 1
chr5:150557292|150557482 hsa-miR-570-3p 0 0 1
chr5:150557292|150557482 hsa-miR-650 0 0 1
chr5:150557292|150557482 hsa-miR-766-5p 0 0 1
chr5:150557292|150557482 hsa-miR-766-3p 0 0 1
chr5:150557292|150557482 hsa-miR-874-5p 0 0 1
chr5:150557292|150557482 hsa-miR-874-3p 0 0 1
chr5:150557292|150557482 hsa-miR-891b 0 0 1
chr5:150557292|150557482 hsa-miR-665 0 0 1
chr5:150557292|150557482 hsa-miR-760 0 0 1
chr5:150557292|150557482 hsa-miR-942-5p 0 0 1
chr5:150557292|150557482 hsa-miR-942-3p 0 0 1
chr5:150557292|150557482 hsa-miR-1228-5p 0 0 1
chr5:150557292|150557482 hsa-miR-1228-3p 0 0 1
chr5:150557292|150557482 hsa-miR-1229-5p 0 0 1
chr5:150557292|150557482 hsa-miR-1229-3p 0 0 1
chr5:150557292|150557482 hsa-miR-663b 0 0 1
chr5:150557292|150557482 hsa-miR-1272 0 0 1
chr5:150557292|150557482 hsa-miR-1322 0 0 1
chr5:150557292|150557482 hsa-miR-1825 0 0 1
chr5:150557292|150557482 hsa-miR-1827 0 0 1
chr5:150557292|150557482 hsa-miR-146b-3p 0 0 1
chr5:150557292|150557482 hsa-miR-199a-5p 0 0 1
chr5:150557292|150557482 hsa-miR-767-3p 0 0 1
chr5:150557292|150557482 hsa-miR-140-3p 0 0 1
chr5:150557292|150557482 hsa-miR-199b-5p 0 0 1
chr5:150557292|150557482 hsa-miR-342-3p 0 0 1
chr5:150557292|150557482 hsa-miR-1274a 0 0 1
chr5:150557292|150557482 hsa-miR-220a 0 0 1
chr5:150557292|150557482 hsa-miR-940 1 0 0
chr5:150557292|150557482 hsa-miR-1276 1 0 0
chr5:150557292|150557482 hsa-miR-711 1 0 0
chr5:150557292|150557482 hsa-miR-3916 1 0 0
chr5:150557292|150557482 hsa-miR-6806-5p 1 0 0
chr5:150557292|150557482 hsa-miR-6796-5p 1 0 0
chr5:150557292|150557482 hsa-miR-6834-5p 1 0 0
chr5:150557292|150557482 hsa-miR-4755-5p 1 0 0
chr5:150557292|150557482 hsa-miR-6885-5p 1 0 0
chr5:150557292|150557482 hsa-miR-6731-5p 1 0 0
chr5:150557292|150557482 hsa-miR-6758-5p 1 0 0
chr5:150557292|150557482 hsa-miR-6856-5p 1 0 0
chr5:150557292|150557482 hsa-miR-6805-3p 1 0 0
chr5:150557292|150557482 hsa-miR-6775-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr5:150557292|150557482
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MGSQGFHFLETRGLCALEQSQALSCSREKPTWGTASRKLWCEKSP
Nucleotide Sequence TTGGGGTCCCAGGGTTTTCATTTCCTGGAGACCCGTGGTCTGTGTGCACTGGAGCAGAGCCAGGCTCTCAGTTGCAGCAGGGAAAAGCCTACATGGGGAACTGCCTCCCGCAAGCTGTGGTGTGAGAAGAGCCCT

CircID chr5:150557292|150557482
ORF Type ORF2
Protein Length 63
Nucleotide Length 189
Protein Sequence LGMGHRAPNTSYVSLFLFWGPRVFISWRPVVCVHWSRARLSVAAGKSLHGELPPASCGVRRAL
Nucleotide Sequence CTGGGGATGGGCCACAGGGCACCAAACACATCATATGTCTCTCTCTTTCTATTTTGGGGTCCCAGGGTTTTCATTTCCTGGAGACCCGTGGTCTGTGTGCACTGGAGCAGAGCCAGGCTCTCAGTTGCAGCAGGGAAAAGCCTACATGGGGAACTGCCTCCCGCAAGCTGTGGTGTGAGAAGAGCCCTG

CircID chr5:150557292|150557482
ORF Type ORF3
Protein Length 47
Nucleotide Length 144
Protein Sequence MSLSFYFGVPGFSFPGDPWSVCTGAEPGSQLQQGKAYMGNCLPQAVV
Nucleotide Sequence ATGTCTCTCTCTTTCTATTTTGGGGTCCCAGGGTTTTCATTTCCTGGAGACCCGTGGTCTGTGTGCACTGGAGCAGAGCCAGGCTCTCAGTTGCAGCAGGGAAAAGCCTACATGGGGAACTGCCTCCCGCAAGCTGTGGTGTGA

CircID chr5:150557292|150557482
ORF Type ORF4
Protein Length 31
Nucleotide Length 96
Protein Sequence MREAVPHVGFSLLQLRAWLCSSAHRPRVSRK
Nucleotide Sequence TTGCGGGAGGCAGTTCCCCATGTAGGCTTTTCCCTGCTGCAACTGAGAGCCTGGCTCTGCTCCAGTGCACACAGACCACGGGTCTCCAGGAAATGA

CircID chr5:150557292|150557482
ORF Type ORF5
Protein Length 39
Nucleotide Length 117
Protein Sequence MALLQCTQTTGLQEMKTLGPQNRKRETYDVFGALWPIPR
Nucleotide Sequence CTGGCTCTGCTCCAGTGCACACAGACCACGGGTCTCCAGGAAATGAAAACCCTGGGACCCCAAAATAGAAAGAGAGAGACATATGATGTGTTTGGTGCCCTGTGGCCCATCCCCAGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites