CircRNA Information

General Information
circRNA Basic Information
CircID chr5:150557622|150557920
Strand +
CircType exon
Host Gene ENSG00000070614.13;
Algorism CIRI2;
Sequence ACAGTCATAGAAAACCCTCTCCTCCCTCATTCTCCTCCAGGGCCGGAAACAGTAAGAGCAGGAGGGATGAACTTCTTAGGATAAAACGCATCCAGTTTCCCCCAGGTTCCTGGCATTGACCCCACAAAACCCTATGCCAGTCCCTTAGGGAAGCTGAAAACTCGCCAGCCGTCTGAGCTGGCAAGGGCAGCCAGCCCACAGCTGTCAAGCCAGGAACCCAGTGTTGCCTCAACGGCCTGGGCAGCAGGGGGTCTAGGCCGCCCCCTCATCCTCACATCAACTAGAGCAGAGGCTGCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:150557622|150557920 hsa-miR-141-5p 0 0 1
chr5:150557622|150557920 hsa-miR-141-3p 0 0 1
chr5:150557622|150557920 hsa-miR-200a-5p 0 0 1
chr5:150557622|150557920 hsa-miR-200a-3p 0 0 1
chr5:150557622|150557920 hsa-miR-370-5p 0 0 1
chr5:150557622|150557920 hsa-miR-370-3p 0 0 1
chr5:150557622|150557920 hsa-miR-452-5p 0 0 1
chr5:150557622|150557920 hsa-miR-452-3p 0 0 1
chr5:150557622|150557920 hsa-miR-604 0 0 1
chr5:150557622|150557920 hsa-miR-625-5p 0 0 1
chr5:150557622|150557920 hsa-miR-625-3p 0 0 1
chr5:150557622|150557920 hsa-miR-637 0 0 1
chr5:150557622|150557920 hsa-miR-647 0 0 1
chr5:150557622|150557920 hsa-miR-765 1 1 1
chr5:150557622|150557920 hsa-miR-873-5p 0 0 1
chr5:150557622|150557920 hsa-miR-873-3p 0 0 1
chr5:150557622|150557920 hsa-miR-938 0 0 1
chr5:150557622|150557920 hsa-miR-943 0 0 1
chr5:150557622|150557920 hsa-miR-1180-5p 0 0 1
chr5:150557622|150557920 hsa-miR-1180-3p 0 0 1
chr5:150557622|150557920 hsa-miR-1202 0 1 1
chr5:150557622|150557920 hsa-miR-1291 0 0 1
chr5:150557622|150557920 hsa-miR-1294 0 0 1
chr5:150557622|150557920 hsa-miR-1304-5p 0 0 1
chr5:150557622|150557920 hsa-miR-1304-3p 0 0 1
chr5:150557622|150557920 hsa-miR-1243 0 0 1
chr5:150557622|150557920 hsa-miR-1255a 0 0 1
chr5:150557622|150557920 hsa-miR-1275 1 1 1
chr5:150557622|150557920 hsa-miR-1321 0 1 1
chr5:150557622|150557920 hsa-miR-1827 0 0 1
chr5:150557622|150557920 hsa-miR-491-5p 0 0 1
chr5:150557622|150557920 hsa-miR-615-5p 0 0 1
chr5:150557622|150557920 hsa-miR-296-3p 0 0 1
chr5:150557622|150557920 hsa-miR-490-3p 0 1 1
chr5:150557622|150557920 hsa-miR-423-5p 0 0 1
chr5:150557622|150557920 hsa-miR-767-3p 0 0 1
chr5:150557622|150557920 hsa-miR-1255b 0 0 1
chr5:150557622|150557920 hsa-miR-1185 0 0 1
chr5:150557622|150557920 hsa-miR-762 0 1 0
chr5:150557622|150557920 hsa-miR-760 1 0 0
chr5:150557622|150557920 hsa-miR-1976 0 1 0
chr5:150557622|150557920 hsa-miR-3175 1 0 0
chr5:150557622|150557920 hsa-miR-3196 0 1 0
chr5:150557622|150557920 hsa-miR-4296 0 1 0
chr5:150557622|150557920 hsa-miR-4322 0 1 0
chr5:150557622|150557920 hsa-miR-4265 0 1 0
chr5:150557622|150557920 hsa-miR-4267 0 1 0
chr5:150557622|150557920 hsa-miR-4281 1 0 0
chr5:150557622|150557920 hsa-miR-4488 0 1 0
chr5:150557622|150557920 hsa-miR-4498 1 0 0
chr5:150557622|150557920 hsa-miR-2392 0 1 0
chr5:150557622|150557920 hsa-miR-4507 1 0 0
chr5:150557622|150557920 hsa-miR-4510 0 1 0
chr5:150557622|150557920 hsa-miR-4526 1 1 0
chr5:150557622|150557920 hsa-miR-4534 1 0 0
chr5:150557622|150557920 hsa-miR-1587 0 1 0
chr5:150557622|150557920 hsa-miR-4669 1 0 0
chr5:150557622|150557920 hsa-miR-4688 1 0 0
chr5:150557622|150557920 hsa-miR-4689 1 1 0
chr5:150557622|150557920 hsa-miR-4739 1 1 0
chr5:150557622|150557920 hsa-miR-4784 1 1 0
chr5:150557622|150557920 hsa-miR-5698 1 0 0
chr5:150557622|150557920 hsa-miR-5703 1 0 0
chr5:150557622|150557920 hsa-miR-6127 1 1 0
chr5:150557622|150557920 hsa-miR-6129 0 1 0
chr5:150557622|150557920 hsa-miR-6130 0 1 0
chr5:150557622|150557920 hsa-miR-6133 1 1 0
chr5:150557622|150557920 hsa-miR-8052 0 1 0
chr5:150557622|150557920 hsa-miR-8085 1 0 0
chr5:150557622|150557920 hsa-miR-12118 1 0 0
chr5:150557622|150557920 hsa-miR-150-3p 1 0 0
chr5:150557622|150557920 hsa-miR-6734-5p 1 0 0
chr5:150557622|150557920 hsa-miR-6765-5p 1 0 0
chr5:150557622|150557920 hsa-miR-7106-5p 1 1 0
chr5:150557622|150557920 hsa-miR-6894-5p 1 1 0
chr5:150557622|150557920 hsa-miR-6857-5p 1 0 0
chr5:150557622|150557920 hsa-miR-4687-3p 1 0 0
chr5:150557622|150557920 hsa-miR-7851-3p 0 1 0
chr5:150557622|150557920 hsa-miR-6880-5p 1 0 0
chr5:150557622|150557920 hsa-miR-7847-3p 1 0 0
chr5:150557622|150557920 hsa-miR-6746-5p 1 0 0
chr5:150557622|150557920 hsa-miR-3064-5p 0 1 0
chr5:150557622|150557920 hsa-miR-6727-5p 1 0 0
chr5:150557622|150557920 hsa-miR-23b-5p 1 1 0
chr5:150557622|150557920 hsa-miR-7845-5p 1 0 0
chr5:150557622|150557920 hsa-miR-6742-5p 0 1 0
chr5:150557622|150557920 hsa-miR-6716-5p 1 0 0
chr5:150557622|150557920 hsa-miR-6796-5p 0 1 0
chr5:150557622|150557920 hsa-miR-6805-5p 0 1 0
chr5:150557622|150557920 hsa-miR-23a-5p 0 1 0
chr5:150557622|150557920 hsa-miR-3126-5p 1 0 0
chr5:150557622|150557920 hsa-miR-4793-3p 1 0 0
chr5:150557622|150557920 hsa-miR-6728-3p 1 1 0
chr5:150557622|150557920 hsa-miR-4738-3p 0 1 0
chr5:150557622|150557920 hsa-miR-6757-3p 0 1 0
chr5:150557622|150557920 hsa-miR-885-3p 1 0 0
chr5:150557622|150557920 hsa-miR-6749-5p 1 0 0
chr5:150557622|150557920 hsa-miR-6834-5p 1 1 0
chr5:150557622|150557920 hsa-miR-149-3p 1 0 0
chr5:150557622|150557920 hsa-miR-6824-5p 1 0 0
chr5:150557622|150557920 hsa-miR-4640-3p 0 1 0
chr5:150557622|150557920 hsa-miR-6892-5p 1 1 0
chr5:150557622|150557920 hsa-miR-34a-5p 1 0 0
chr5:150557622|150557920 hsa-miR-6859-3p 0 1 0
chr5:150557622|150557920 hsa-miR-6812-5p 1 0 0
chr5:150557622|150557920 hsa-miR-6816-5p 0 1 0
chr5:150557622|150557920 hsa-miR-6870-5p 1 1 0
chr5:150557622|150557920 hsa-miR-1343-5p 1 0 0
chr5:150557622|150557920 hsa-miR-6803-5p 1 0 0
chr5:150557622|150557920 hsa-miR-6813-5p 1 0 0
chr5:150557622|150557920 hsa-miR-6819-5p 1 0 0
chr5:150557622|150557920 hsa-miR-7107-5p 1 0 0
chr5:150557622|150557920 hsa-miR-11181-3p 1 1 0
chr5:150557622|150557920 hsa-miR-1249-5p 1 1 0
chr5:150557622|150557920 hsa-miR-6797-5p 1 0 0
chr5:150557622|150557920 hsa-miR-7111-5p 1 0 0
chr5:150557622|150557920 hsa-miR-892c-3p 0 1 0
chr5:150557622|150557920 hsa-miR-3620-5p 0 1 0
chr5:150557622|150557920 hsa-miR-4728-5p 1 0 0
chr5:150557622|150557920 hsa-miR-449c-5p 1 0 0
chr5:150557622|150557920 hsa-miR-4649-5p 1 0 0
chr5:150557622|150557920 hsa-miR-6795-5p 1 0 0
chr5:150557622|150557920 hsa-miR-4723-5p 1 0 0
chr5:150557622|150557920 hsa-miR-3199 0 1 0
chr5:150557622|150557920 hsa-miR-6511a-5p 1 0 0
chr5:150557622|150557920 hsa-miR-30c-1-3p 1 0 0
chr5:150557622|150557920 hsa-miR-6758-5p 1 0 0
chr5:150557622|150557920 hsa-miR-6856-5p 1 0 0
chr5:150557622|150557920 hsa-miR-4665-5p 0 1 0
chr5:150557622|150557920 hsa-miR-6877-3p 1 1 0
chr5:150557622|150557920 hsa-miR-6891-5p 1 0 0
chr5:150557622|150557920 hsa-miR-6750-5p 1 0 0
chr5:150557622|150557920 hsa-miR-6893-3p 0 1 0
chr5:150557622|150557920 hsa-miR-6801-3p 0 1 0
chr5:150557622|150557920 hsa-miR-6805-3p 1 0 0
chr5:150557622|150557920 hsa-miR-6810-3p 0 1 0
chr5:150557622|150557920 hsa-miR-6819-3p 1 0 0
chr5:150557622|150557920 hsa-miR-3085-3p 0 1 0
chr5:150557622|150557920 hsa-miR-4676-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr5:150557622|150557920
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence MKTRQPSELARAASPQLSSQEPSVASTAWAAGGLGRPLILTSTRAEAA
Nucleotide Sequence CTGAAAACTCGCCAGCCGTCTGAGCTGGCAAGGGCAGCCAGCCCACAGCTGTCAAGCCAGGAACCCAGTGTTGCCTCAACGGCCTGGGCAGCAGGGGGTCTAGGCCGCCCCCTCATCCTCACATCAACTAGAGCAGAGGCTGCC
CircID chr5:150557622|150557920
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MSWQGQPAHSCQARNPVLPQRPGQQGV
Nucleotide Sequence CTGAGCTGGCAAGGGCAGCCAGCCCACAGCTGTCAAGCCAGGAACCCAGTGTTGCCTCAACGGCCTGGGCAGCAGGGGGTCTAG
CircID chr5:150557622|150557920
ORF Type ORF3
Protein Length 45
Nucleotide Length 138
Protein Sequence MRGRPRPPAAQAVEATLGSWLDSCGLAALASSDGWRVFSFPKGLA
Nucleotide Sequence ATGAGGGGGCGGCCTAGACCCCCTGCTGCCCAGGCCGTTGAGGCAACACTGGGTTCCTGGCTTGACAGCTGTGGGCTGGCTGCCCTTGCCAGCTCAGACGGCTGGCGAGTTTTCAGCTTCCCTAAGGGACTGGCATAG
CircID chr5:150557622|150557920
ORF Type ORF4
Protein Length 29
Nucleotide Length 90
Protein Sequence MPGTWGKLDAFYPKKFIPPALTVSGPGGE
Nucleotide Sequence ATGCCAGGAACCTGGGGGAAACTGGATGCGTTTTATCCTAAGAAGTTCATCCCTCCTGCTCTTACTGTTTCCGGCCCTGGAGGAGAATGA
CircID chr5:150557622|150557920
ORF Type ORF5
Protein Length 80
Nucleotide Length 243
Protein Sequence MLPRPLRQHWVPGLTAVGWLPLPAQTAGEFSASLRDWHRVLWGQCQEPGGNWMRFILRSSSLLLLLFPALEENEGGEGFL
Nucleotide Sequence CTGCTGCCCAGGCCGTTGAGGCAACACTGGGTTCCTGGCTTGACAGCTGTGGGCTGGCTGCCCTTGCCAGCTCAGACGGCTGGCGAGTTTTCAGCTTCCCTAAGGGACTGGCATAGGGTTTTGTGGGGTCAATGCCAGGAACCTGGGGGAAACTGGATGCGTTTTATCCTAAGAAGTTCATCCCTCCTGCTCTTACTGTTTCCGGCCCTGGAGGAGAATGAGGGAGGAGAGGGTTTTCTATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab