CircRNA Information

General Information
circRNA Basic Information
CircID chr5:150795725|150795866
Strand -
CircType exon
Host Gene ENSG00000256235.1;
Algorism CIRI2;
Sequence CTGAGTTCTGGTTTTGATTCTGCCACGAGCCAGCTGTGTGAATTTGGTCAAGGGACCTAACTCTCTGAGTTCCAGGTTCCTTATCTTTCAAATGGGGATGGTGATCCCTGCCCTTTCTACCTCATAGGGATGTGAGAACCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:150795725|150795866 hsa-let-7b-5p 0 0 1
chr5:150795725|150795866 hsa-let-7b-3p 0 0 1
chr5:150795725|150795866 hsa-let-7c-5p 0 0 1
chr5:150795725|150795866 hsa-let-7c-3p 0 0 1
chr5:150795725|150795866 hsa-let-7d-5p 0 0 1
chr5:150795725|150795866 hsa-let-7d-3p 0 0 1
chr5:150795725|150795866 hsa-let-7e-5p 0 0 1
chr5:150795725|150795866 hsa-let-7e-3p 0 0 1
chr5:150795725|150795866 hsa-miR-98-5p 0 0 1
chr5:150795725|150795866 hsa-miR-98-3p 0 0 1
chr5:150795725|150795866 hsa-let-7g-5p 0 0 1
chr5:150795725|150795866 hsa-let-7g-3p 0 0 1
chr5:150795725|150795866 hsa-let-7i-5p 0 0 1
chr5:150795725|150795866 hsa-let-7i-3p 0 0 1
chr5:150795725|150795866 hsa-miR-149-5p 0 0 1
chr5:150795725|150795866 hsa-miR-149-3p 0 0 1
chr5:150795725|150795866 hsa-miR-377-5p 0 0 1
chr5:150795725|150795866 hsa-miR-377-3p 0 0 1
chr5:150795725|150795866 hsa-miR-488-5p 0 0 1
chr5:150795725|150795866 hsa-miR-488-3p 0 0 1
chr5:150795725|150795866 hsa-miR-202-5p 0 0 1
chr5:150795725|150795866 hsa-miR-202-3p 0 0 1
chr5:150795725|150795866 hsa-miR-619-5p 0 0 1
chr5:150795725|150795866 hsa-miR-619-3p 0 0 1
chr5:150795725|150795866 hsa-miR-623 0 0 1
chr5:150795725|150795866 hsa-miR-1323 0 0 1
chr5:150795725|150795866 hsa-miR-1229-5p 0 0 1
chr5:150795725|150795866 hsa-miR-1229-3p 0 0 1
chr5:150795725|150795866 hsa-miR-1204 0 0 1
chr5:150795725|150795866 hsa-miR-548o-3p 0 0 1
chr5:150795725|150795866 hsa-miR-548o 0 0 1
chr5:150795725|150795866 hsa-miR-490-3p 0 0 1
chr5:150795725|150795866 hsa-miR-1207-3p 0 0 1
chr5:150795725|150795866 hsa-miR-1207-5p 0 0 1
chr5:150795725|150795866 hsa-miR-342-3p 0 0 1
chr5:150795725|150795866 hsa-let-7a 0 0 1
chr5:150795725|150795866 hsa-let-7f 0 0 1
chr5:150795725|150795866 hsa-miR-663a 1 0 0
chr5:150795725|150795866 hsa-miR-940 1 0 0
chr5:150795725|150795866 hsa-miR-3661 1 1 0
chr5:150795725|150795866 hsa-miR-4672 1 0 0
chr5:150795725|150795866 hsa-miR-5681a 0 1 0
chr5:150795725|150795866 hsa-miR-8063 0 1 0
chr5:150795725|150795866 hsa-miR-12120 0 1 0
chr5:150795725|150795866 hsa-miR-203a-5p 0 1 0
chr5:150795725|150795866 hsa-miR-6730-5p 1 0 0
chr5:150795725|150795866 hsa-miR-3928-3p 0 1 0
chr5:150795725|150795866 hsa-miR-6721-5p 0 1 0
chr5:150795725|150795866 hsa-miR-197-5p 1 1 0
chr5:150795725|150795866 hsa-miR-542-5p 0 1 0
chr5:150795725|150795866 hsa-miR-4650-3p 0 1 0
chr5:150795725|150795866 hsa-miR-7112-5p 1 0 0
chr5:150795725|150795866 hsa-miR-6743-5p 1 0 0
chr5:150795725|150795866 hsa-miR-6879-5p 1 1 0
chr5:150795725|150795866 hsa-miR-6735-5p 1 1 0
chr5:150795725|150795866 hsa-miR-6858-5p 1 0 0
chr5:150795725|150795866 hsa-miR-6831-5p 0 1 0
chr5:150795725|150795866 hsa-miR-7843-5p 0 1 0
chr5:150795725|150795866 hsa-miR-10397-5p 0 1 0
chr5:150795725|150795866 hsa-miR-23b-3p 1 0 0
chr5:150795725|150795866 hsa-miR-3914 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr5:150795725|150795866
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MVLILPRASCVNLVKGPNSLSSRFLIFQMGMVIPALSTS
Nucleotide Sequence CTGGTTTTGATTCTGCCACGAGCCAGCTGTGTGAATTTGGTCAAGGGACCTAACTCTCTGAGTTCCAGGTTCCTTATCTTTCAAATGGGGATGGTGATCCCTGCCCTTTCTACCTCATAG
CircID chr5:150795725|150795866
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MKDKEPGTQRVRSLDQIHTAGSWQNQNQNS
Nucleotide Sequence TTGAAAGATAAGGAACCTGGAACTCAGAGAGTTAGGTCCCTTGACCAAATTCACACAGCTGGCTCGTGGCAGAATCAAAACCAGAACTCA
CircID chr5:150795725|150795866
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MELRELGPLTKFTQLARGRIKTRTQ
Nucleotide Sequence CTGGAACTCAGAGAGTTAGGTCCCTTGACCAAATTCACACAGCTGGCTCGTGGCAGAATCAAAACCAGAACTCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab