CircRNA Information

General Information
circRNA Basic Information
CircID chr5:151490982|151491088
Strand +
CircType exon
Host Gene ENSG00000123643.11;
Algorism CIRI2;
Sequence CTCTGGCTTGGAGAAATTGGGGTGACAGGAGCAGGGTCACAGAGCTCAAGAGTATCTGGCCGGAAAAGCCCACGGTTTCCCTTTGCTCCAGCAGATGCAGCCTCACA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:151490982|151491088 hsa-miR-526b-5p 0 0 1
chr5:151490982|151491088 hsa-miR-526b-3p 0 0 1
chr5:151490982|151491088 hsa-miR-504-5p 0 0 1
chr5:151490982|151491088 hsa-miR-504-3p 0 0 1
chr5:151490982|151491088 hsa-miR-1180-5p 0 0 1
chr5:151490982|151491088 hsa-miR-1180-3p 0 0 1
chr5:151490982|151491088 hsa-miR-1287-5p 0 0 1
chr5:151490982|151491088 hsa-miR-1287-3p 0 0 1
chr5:151490982|151491088 hsa-miR-1294 0 1 1
chr5:151490982|151491088 hsa-miR-485-5p 0 0 1
chr5:151490982|151491088 hsa-miR-515-5p 0 0 1
chr5:151490982|151491088 hsa-miR-527 0 1 0
chr5:151490982|151491088 hsa-miR-612 1 0 0
chr5:151490982|151491088 hsa-miR-3135b 0 1 0
chr5:151490982|151491088 hsa-miR-4686 0 1 0
chr5:151490982|151491088 hsa-miR-6071 0 1 0
chr5:151490982|151491088 hsa-miR-6879-3p 1 0 0
chr5:151490982|151491088 hsa-miR-3692-5p 0 1 0
chr5:151490982|151491088 hsa-miR-4725-5p 0 1 0
chr5:151490982|151491088 hsa-miR-6728-3p 0 1 0
chr5:151490982|151491088 hsa-miR-6772-3p 0 1 0
chr5:151490982|151491088 hsa-miR-4793-5p 1 0 0
chr5:151490982|151491088 hsa-miR-3677-3p 1 0 0
chr5:151490982|151491088 hsa-miR-6773-3p 0 1 0
chr5:151490982|151491088 hsa-miR-1199-3p 1 0 0
chr5:151490982|151491088 hsa-miR-6802-3p 0 1 0
chr5:151490982|151491088 hsa-miR-6732-3p 0 1 0
chr5:151490982|151491088 hsa-miR-6808-3p 0 1 0
chr5:151490982|151491088 hsa-miR-6784-3p 1 0 0
chr5:151490982|151491088 hsa-miR-6810-3p 1 1 0
chr5:151490982|151491088 hsa-miR-6775-3p 1 0 0
chr5:151490982|151491088 hsa-miR-518a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr5:151490982|151491088
ORF Type ORF1
Protein Length 35
Nucleotide Length 105
Protein Sequence LAWRNWGDRSRVTELKSIWPEKPTVSLCSSRCSLT
Nucleotide Sequence CTGGCTTGGAGAAATTGGGGTGACAGGAGCAGGGTCACAGAGCTCAAGAGTATCTGGCCGGAAAAGCCCACGGTTTCCCTTTGCTCCAGCAGATGCAGCCTCACA

CircID chr5:151490982|151491088
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MHLLEQRETVGFSGQILLSSVTLLLSPQFLQAR
Nucleotide Sequence CTGCATCTGCTGGAGCAAAGGGAAACCGTGGGCTTTTCCGGCCAGATACTCTTGAGCTCTGTGACCCTGCTCCTGTCACCCCAATTTCTCCAAGCCAGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites