CircRNA Information

General Information
circRNA Basic Information
CircID chr5:151662623|151662872
Strand +
CircType exon
Host Gene ENSG00000113140.9;
Algorism CIRI2;
Sequence TGTCAGTTCTCTGGGAAGTGGTCAGCGCATCCTGCAGGGCTTCTCCTCCTCTGTCTTTTGGAGAACCAGGGCTCTTCTCAGGGGCTCTAGGGACTGCCAGGCTGTTTCAGCCAGGAAGGCCAAAATCAAGAGTGAGATGTAGAAAGTTGTAAAATAGAAAAAGTGGAGTTGGTGAATCGGTTGTTCTTTCCTCACATTTGGATGATTGTCATAAGGTTTTTAGCATGTTCCTCCTTTTCTTCACCCTCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:151662623|151662872 hsa-miR-197-5p 0 0 1
chr5:151662623|151662872 hsa-miR-197-3p 0 0 1
chr5:151662623|151662872 hsa-miR-34a-5p 0 0 1
chr5:151662623|151662872 hsa-miR-34a-3p 0 0 1
chr5:151662623|151662872 hsa-miR-146a-5p 0 0 1
chr5:151662623|151662872 hsa-miR-146a-3p 0 0 1
chr5:151662623|151662872 hsa-miR-425-5p 0 0 1
chr5:151662623|151662872 hsa-miR-425-3p 0 0 1
chr5:151662623|151662872 hsa-miR-449a 0 0 1
chr5:151662623|151662872 hsa-miR-494-5p 0 0 1
chr5:151662623|151662872 hsa-miR-494-3p 0 0 1
chr5:151662623|151662872 hsa-miR-449b-5p 0 0 1
chr5:151662623|151662872 hsa-miR-449b-3p 0 0 1
chr5:151662623|151662872 hsa-miR-765 0 1 1
chr5:151662623|151662872 hsa-miR-1205 0 1 1
chr5:151662623|151662872 hsa-miR-1286 0 0 1
chr5:151662623|151662872 hsa-miR-1294 0 0 1
chr5:151662623|151662872 hsa-miR-1253 0 0 1
chr5:151662623|151662872 hsa-miR-1225-3p 0 1 1
chr5:151662623|151662872 hsa-miR-125a-5p 0 0 1
chr5:151662623|151662872 hsa-miR-34c-5p 0 0 1
chr5:151662623|151662872 hsa-miR-146b-5p 0 0 1
chr5:151662623|151662872 hsa-miR-515-5p 0 1 1
chr5:151662623|151662872 hsa-miR-548d-3p 0 0 1
chr5:151662623|151662872 hsa-miR-1233 0 0 1
chr5:151662623|151662872 hsa-miR-125b 0 0 1
chr5:151662623|151662872 hsa-miR-1300 0 0 1
chr5:151662623|151662872 hsa-miR-4297 0 1 0
chr5:151662623|151662872 hsa-miR-4319 0 1 0
chr5:151662623|151662872 hsa-miR-3916 0 1 0
chr5:151662623|151662872 hsa-miR-4739 1 0 0
chr5:151662623|151662872 hsa-miR-4779 0 1 0
chr5:151662623|151662872 hsa-miR-5703 0 1 0
chr5:151662623|151662872 hsa-miR-7703 1 0 0
chr5:151662623|151662872 hsa-miR-8073 0 1 0
chr5:151662623|151662872 hsa-miR-12118 0 1 0
chr5:151662623|151662872 hsa-miR-671-5p 1 1 0
chr5:151662623|151662872 hsa-miR-1233-3p 0 1 0
chr5:151662623|151662872 hsa-miR-766-5p 1 1 0
chr5:151662623|151662872 hsa-miR-6880-5p 0 1 0
chr5:151662623|151662872 hsa-miR-3064-5p 0 1 0
chr5:151662623|151662872 hsa-miR-2467-3p 1 1 0
chr5:151662623|151662872 hsa-miR-6825-3p 0 1 0
chr5:151662623|151662872 hsa-miR-34b-3p 1 0 0
chr5:151662623|151662872 hsa-miR-671-3p 1 0 0
chr5:151662623|151662872 hsa-miR-6868-5p 0 1 0
chr5:151662623|151662872 hsa-miR-3160-5p 1 1 0
chr5:151662623|151662872 hsa-miR-4746-5p 0 1 0
chr5:151662623|151662872 hsa-miR-1285-5p 0 1 0
chr5:151662623|151662872 hsa-miR-5197-3p 0 1 0
chr5:151662623|151662872 hsa-miR-6779-3p 0 1 0
chr5:151662623|151662872 hsa-miR-628-5p 0 1 0
chr5:151662623|151662872 hsa-miR-6831-3p 1 0 0
chr5:151662623|151662872 hsa-miR-6769b-5p 1 0 0
chr5:151662623|151662872 hsa-miR-6812-5p 1 1 0
chr5:151662623|151662872 hsa-miR-6752-5p 1 0 0
chr5:151662623|151662872 hsa-miR-11181-3p 0 1 0
chr5:151662623|151662872 hsa-miR-6797-5p 1 0 0
chr5:151662623|151662872 hsa-miR-4728-5p 0 1 0
chr5:151662623|151662872 hsa-miR-6780b-5p 1 0 0
chr5:151662623|151662872 hsa-miR-6858-5p 1 0 0
chr5:151662623|151662872 hsa-miR-6883-5p 0 1 0
chr5:151662623|151662872 hsa-miR-6856-5p 0 1 0
chr5:151662623|151662872 hsa-miR-6799-3p 1 1 0
chr5:151662623|151662872 hsa-miR-3173-3p 1 1 0
chr5:151662623|151662872 hsa-miR-6891-5p 0 1 0
chr5:151662623|151662872 hsa-miR-6785-5p 0 1 0
chr5:151662623|151662872 hsa-miR-3085-3p 0 1 0
chr5:151662623|151662872 hsa-miR-5581-5p 0 1 0
chr5:151662623|151662872 hsa-miR-6859-5p 1 0 0
chr5:151662623|151662872 hsa-miR-10394-5p 0 1 0
chr5:151662623|151662872 hsa-miR-7153-5p 0 1 0
chr5:151662623|151662872 hsa-miR-519e-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr5:151662623|151662872
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MVNRLFFPHIWMIVIRFLACSSFSSPS
Nucleotide Sequence TTGGTGAATCGGTTGTTCTTTCCTCACATTTGGATGATTGTCATAAGGTTTTTAGCATGTTCCTCCTTTTCTTCACCCTCC

CircID chr5:151662623|151662872
ORF Type ORF2
Protein Length 43
Nucleotide Length 132
Protein Sequence MGSGQRILQGFSSSVFWRTRALLRGSRDCQAVSARKAKIKSEM
Nucleotide Sequence CTGGGAAGTGGTCAGCGCATCCTGCAGGGCTTCTCCTCCTCTGTCTTTTGGAGAACCAGGGCTCTTCTCAGGGGCTCTAGGGACTGCCAGGCTGTTTCAGCCAGGAAGGCCAAAATCAAGAGTGAGATGTAG

CircID chr5:151662623|151662872
ORF Type ORF3
Protein Length 33
Nucleotide Length 102
Protein Sequence MSFGEPGLFSGALGTARLFQPGRPKSRVRCRKL
Nucleotide Sequence CTGTCTTTTGGAGAACCAGGGCTCTTCTCAGGGGCTCTAGGGACTGCCAGGCTGTTTCAGCCAGGAAGGCCAAAATCAAGAGTGAGATGTAGAAAGTTGTAA

CircID chr5:151662623|151662872
ORF Type ORF4
Protein Length 33
Nucleotide Length 99
Protein Sequence MAVPRAPEKSPGSPKDRGGEALQDALTTSQRTD
Nucleotide Sequence CTGGCAGTCCCTAGAGCCCCTGAGAAGAGCCCTGGTTCTCCAAAAGACAGAGGAGGAGAAGCCCTGCAGGATGCGCTGACCACTTCCCAGAGAACTGAC

CircID chr5:151662623|151662872
ORF Type ORF5
Protein Length 35
Nucleotide Length 108
Protein Sequence MILAFLAETAWQSLEPLRRALVLQKTEEEKPCRMR
Nucleotide Sequence TTGATTTTGGCCTTCCTGGCTGAAACAGCCTGGCAGTCCCTAGAGCCCCTGAGAAGAGCCCTGGTTCTCCAAAAGACAGAGGAGGAGAAGCCCTGCAGGATGCGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites