CircRNA Information

General Information
circRNA Basic Information
CircID chr5:151662780|151662908
Strand +
CircType exon
Host Gene ENSG00000113140.9;
Algorism CIRI2;
Sequence ATTAGGCTGTTGGTTCAAACTTTTGGGAGCACGGACTGTCAGTTCTCTGGGAAGTGGTCAGCGCATCCTGCAGGGCTTCTCCTCCTCTGTCTTTTGGAGAACCAGGGCTCTTCTCAGGGGCTCTAGGGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:151662780|151662908 hsa-miR-146a-5p 0 0 1
chr5:151662780|151662908 hsa-miR-146a-3p 0 0 1
chr5:151662780|151662908 hsa-miR-150-5p 0 0 1
chr5:151662780|151662908 hsa-miR-150-3p 0 0 1
chr5:151662780|151662908 hsa-miR-561-5p 0 0 1
chr5:151662780|151662908 hsa-miR-561-3p 0 0 1
chr5:151662780|151662908 hsa-miR-765 0 1 1
chr5:151662780|151662908 hsa-miR-1205 0 1 1
chr5:151662780|151662908 hsa-miR-1286 0 0 1
chr5:151662780|151662908 hsa-miR-1253 0 0 1
chr5:151662780|151662908 hsa-miR-1225-3p 0 1 1
chr5:151662780|151662908 hsa-miR-125a-5p 0 0 1
chr5:151662780|151662908 hsa-miR-146b-5p 0 1 1
chr5:151662780|151662908 hsa-miR-515-5p 0 1 1
chr5:151662780|151662908 hsa-miR-1233 0 0 1
chr5:151662780|151662908 hsa-miR-125b 0 0 1
chr5:151662780|151662908 hsa-miR-1300 0 0 1
chr5:151662780|151662908 hsa-miR-4319 0 1 0
chr5:151662780|151662908 hsa-miR-4526 0 1 0
chr5:151662780|151662908 hsa-miR-4739 1 0 0
chr5:151662780|151662908 hsa-miR-5703 0 1 0
chr5:151662780|151662908 hsa-miR-671-5p 1 1 0
chr5:151662780|151662908 hsa-miR-1233-3p 0 1 0
chr5:151662780|151662908 hsa-miR-4728-3p 1 0 0
chr5:151662780|151662908 hsa-miR-2467-3p 1 1 0
chr5:151662780|151662908 hsa-miR-6782-5p 1 0 0
chr5:151662780|151662908 hsa-miR-3925-5p 0 1 0
chr5:151662780|151662908 hsa-miR-6825-3p 0 1 0
chr5:151662780|151662908 hsa-miR-7113-5p 0 1 0
chr5:151662780|151662908 hsa-miR-2277-5p 1 0 0
chr5:151662780|151662908 hsa-miR-5197-3p 0 1 0
chr5:151662780|151662908 hsa-miR-6779-3p 0 1 0
chr5:151662780|151662908 hsa-miR-628-5p 0 1 0
chr5:151662780|151662908 hsa-miR-11181-3p 0 1 0
chr5:151662780|151662908 hsa-miR-6858-5p 1 0 0
chr5:151662780|151662908 hsa-miR-6856-5p 0 1 0
chr5:151662780|151662908 hsa-miR-6799-3p 1 1 0
chr5:151662780|151662908 hsa-miR-5008-3p 1 0 0
chr5:151662780|151662908 hsa-miR-10398-3p 0 1 0
chr5:151662780|151662908 hsa-miR-10394-5p 0 1 0
chr5:151662780|151662908 hsa-miR-7153-5p 0 1 0
chr5:151662780|151662908 hsa-miR-519e-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr5:151662780|151662908
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MLVQTFGSTDCQFSGKWSAHPAGLLLLCLLENQGSSQGL
Nucleotide Sequence CTGTTGGTTCAAACTTTTGGGAGCACGGACTGTCAGTTCTCTGGGAAGTGGTCAGCGCATCCTGCAGGGCTTCTCCTCCTCTGTCTTTTGGAGAACCAGGGCTCTTCTCAGGGGCTCTAG

CircID chr5:151662780|151662908
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MGARTVSSLGSGQRILQGFSSSVFWRTRALLRGSR
Nucleotide Sequence TTGGGAGCACGGACTGTCAGTTCTCTGGGAAGTGGTCAGCGCATCCTGCAGGGCTTCTCCTCCTCTGTCTTTTGGAGAACCAGGGCTCTTCTCAGGGGCTCTAGG

CircID chr5:151662780|151662908
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MSVLWEVVSASCRASPPLSFGEPGLFSGALG
Nucleotide Sequence CTGTCAGTTCTCTGGGAAGTGGTCAGCGCATCCTGCAGGGCTTCTCCTCCTCTGTCTTTTGGAGAACCAGGGCTCTTCTCAGGGGCTCTAGGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites