CircRNA Information

General Information
circRNA Basic Information
CircID chr5:151803901|151804008
Strand +
CircType exon
Host Gene ENSG00000145907.13;
Algorism CIRI2;
Sequence CACCCAGCCCACCTCGAGGGCCTCCAGGTCCCCGAAGGCGATTATCTCGTCGGTCGCCTTCCCTGGCAGCTCGAGTCTTCTTCTCTTCGACATTCAGACGGACCTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:151803901|151804008 hsa-miR-22-5p 0 0 1
chr5:151803901|151804008 hsa-miR-22-3p 0 0 1
chr5:151803901|151804008 hsa-miR-492 0 1 1
chr5:151803901|151804008 hsa-miR-558 0 0 1
chr5:151803901|151804008 hsa-miR-619-5p 0 0 1
chr5:151803901|151804008 hsa-miR-619-3p 0 0 1
chr5:151803901|151804008 hsa-miR-631 0 0 1
chr5:151803901|151804008 hsa-miR-650 0 0 1
chr5:151803901|151804008 hsa-miR-541-5p 0 0 1
chr5:151803901|151804008 hsa-miR-541-3p 0 0 1
chr5:151803901|151804008 hsa-miR-1294 0 1 1
chr5:151803901|151804008 hsa-miR-1253 1 1 1
chr5:151803901|151804008 hsa-miR-542-5p 0 0 1
chr5:151803901|151804008 hsa-miR-654-5p 0 0 1
chr5:151803901|151804008 hsa-miR-637 1 1 0
chr5:151803901|151804008 hsa-miR-765 1 0 0
chr5:151803901|151804008 hsa-miR-2861 1 0 0
chr5:151803901|151804008 hsa-miR-3185 0 1 0
chr5:151803901|151804008 hsa-miR-4254 0 1 0
chr5:151803901|151804008 hsa-miR-3649 0 1 0
chr5:151803901|151804008 hsa-miR-4513 1 0 0
chr5:151803901|151804008 hsa-miR-1587 0 1 0
chr5:151803901|151804008 hsa-miR-4741 1 0 0
chr5:151803901|151804008 hsa-miR-4751 1 0 0
chr5:151803901|151804008 hsa-miR-6088 1 0 0
chr5:151803901|151804008 hsa-miR-8085 1 0 0
chr5:151803901|151804008 hsa-miR-9500 0 1 0
chr5:151803901|151804008 hsa-miR-12128 0 1 0
chr5:151803901|151804008 hsa-miR-671-5p 1 1 0
chr5:151803901|151804008 hsa-miR-6089 1 0 0
chr5:151803901|151804008 hsa-miR-5008-5p 1 1 0
chr5:151803901|151804008 hsa-miR-5006-5p 0 1 0
chr5:151803901|151804008 hsa-miR-6501-5p 1 0 0
chr5:151803901|151804008 hsa-miR-6726-5p 1 0 0
chr5:151803901|151804008 hsa-miR-3620-5p 0 1 0
chr5:151803901|151804008 hsa-miR-5196-5p 0 1 0
chr5:151803901|151804008 hsa-miR-939-5p 1 1 0
chr5:151803901|151804008 hsa-miR-6856-5p 0 1 0
chr5:151803901|151804008 hsa-miR-4747-5p 0 1 0
chr5:151803901|151804008 hsa-miR-6753-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr5:151803901|151804008
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MSKRRRLELPGKATDEIIAFGDLEALEVGWV
Nucleotide Sequence ATGTCGAAGAGAAGAAGACTCGAGCTGCCAGGGAAGGCGACCGACGAGATAATCGCCTTCGGGGACCTGGAGGCCCTCGAGGTGGGCTGGGTG

CircID chr5:151803901|151804008
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MNVEEKKTRAAREGDRRDNRLRGPGGPRGGLG
Nucleotide Sequence CTGAATGTCGAAGAGAAGAAGACTCGAGCTGCCAGGGAAGGCGACCGACGAGATAATCGCCTTCGGGGACCTGGAGGCCCTCGAGGTGGGCTGGGT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites