CircNet

General Information

circRNA Basic Information

CircID	chr5:154898440\|154899310
Strand	-
CircType	exon
Host Gene	ENSG00000082516.8;
Algorism	find_circ;CIRI2;DCC;
Sequence	GGAAGCTATTGCGATTGCCAAGGCCCGGCTGCGCCCGGAGGACCCAGTCCTGAAGGACTTGTACCTCAGCTGGGGAACCGTCCTAGAAAGAGATGGCCACTATGCTGTAGCTGCCAAATGCTATTTAGGGGCCACTTGTGCTTATGATGCAGCCAAAGTTTTGGCCAAAAAGGGGGATGCGGCATCACTTAGAACGGCTGCAGAGTTGGCTGCCATCGTAGGAGAGGATGAGTTGTCTGCTTCCCTGGCTCTCAGATGTGCCCAAGAGCTGCTTCTGGCCAACAACTGGGTGGGAGCCCAGGAAGCCCTGCAGCTGCATGAAAGTCTACAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:154898440\|154899310	hsa-miR-22-3p	0	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:154898440\|154899310
ORF Type	ORF1
Protein Length	45
Nucleotide Length	135
Protein Sequence	MQLQGFLGSHPVVGQKQLLGTSESQGSRQLILSYDGSQLCSRSK*
Nucleotide Sequence	ATGCAGCTGCAGGGCTTCCTGGGCTCCCACCCAGTTGTTGGCCAGAAGCAGCTCTTGGGCACATCTGAGAGCCAGGGAAGCAGACAACTCATCCTCTCCTACGATGGCAGCCAACTCTGCAGCCGTTCTAAGTGA

CircID	chr5:154898440\|154899310
ORF Type	ORF2
Protein Length	91
Nucleotide Length	273
Protein Sequence	LYLSWGTVLERDGHYAVAAKCYLGATCAYDAAKVLAKKGDAASLRTAAELAAIVGEDELSASLALRCAQELLLANNWVGAQEALQLHESLQ
Nucleotide Sequence	TTGTACCTCAGCTGGGGAACCGTCCTAGAAAGAGATGGCCACTATGCTGTAGCTGCCAAATGCTATTTAGGGGCCACTTGTGCTTATGATGCAGCCAAAGTTTTGGCCAAAAAGGGGGATGCGGCATCACTTAGAACGGCTGCAGAGTTGGCTGCCATCGTAGGAGAGGATGAGTTGTCTGCTTCCCTGGCTCTCAGATGTGCCCAAGAGCTGCTTCTGGCCAACAACTGGGTGGGAGCCCAGGAAGCCCTGCAGCTGCATGAAAGTCTACAG

CircID	chr5:154898440\|154899310
ORF Type	ORF3
Protein Length	40
Nucleotide Length	120
Protein Sequence	MPHPPFWPKLWLHHKHKWPLNSIWQLQHSGHLFLGRFPS*
Nucleotide Sequence	ATGCCGCATCCCCCTTTTTGGCCAAAACTTTGGCTGCATCATAAGCACAAGTGGCCCCTAAATAGCATTTGGCAGCTACAGCATAGTGGCCATCTCTTTCTAGGACGGTTCCCCAGCTGA

CircID	chr5:154898440\|154899310
ORF Type	ORF4
Protein Length	34
Nucleotide Length	102
Protein Sequence	MSCLLPWLSDVPKSCFWPTTGWEPRKPCSCMKVY
Nucleotide Sequence	ATGAGTTGTCTGCTTCCCTGGCTCTCAGATGTGCCCAAGAGCTGCTTCTGGCCAACAACTGGGTGGGAGCCCAGGAAGCCCTGCAGCTGCATGAAAGTCTAC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:154898440\|154899310	MOV10	0	0	1
chr5:154898440\|154899310	ELAVL1	2	0	2
chr5:154898440\|154899310	FAM120A	0	0	2
chr5:154898440\|154899310	PRPF8	0	1	0
chr5:154898440\|154899310	UPF1	1	1	0
chr5:154898440\|154899310	TNRC6A	0	0	1
chr5:154898440\|154899310	FMR1	0	0	9
chr5:154898440\|154899310	TROVE2	0	0	1
chr5:154898440\|154899310	FUS	0	1	0
chr5:154898440\|154899310	DGCR8	0	0	1
chr5:154898440\|154899310	SRSF7	0	0	1
chr5:154898440\|154899310	SRSF1	0	0	3
chr5:154898440\|154899310	NOP58	2	1	0
chr5:154898440\|154899310	U2AF1	0	0	1
chr5:154898440\|154899310	U2AF2	6	1	0
chr5:154898440\|154899310	SRSF9	0	0	1
chr5:154898440\|154899310	DDX54	0	0	1
chr5:154898440\|154899310	RBM10	1	0	0
chr5:154898440\|154899310	HNRNPL	1	0	0
chr5:154898440\|154899310	PTBP1	0	2	0
chr5:154898440\|154899310	HNRNPC	6	0	0
chr5:154898440\|154899310	HNRNPA1	1	0	0
chr5:154898440\|154899310	LIN28B	0	0	4
chr5:154898440\|154899310	FXR1	0	0	2
chr5:154898440\|154899310	FXR2	0	0	2
chr5:154898440\|154899310	SND1	0	0	2
chr5:154898440\|154899310	IGF2BP1	0	0	1
chr5:154898440\|154899310	IGF2BP3	0	0	1
chr5:154898440\|154899310	IGF2BP2	1	0	0
chr5:154898440\|154899310	TAF15	2	2	0
chr5:154898440\|154899310	BUD13	0	0	2
chr5:154898440\|154899310	EIF4G2	0	0	1
chr5:154898440\|154899310	DDX42	0	0	1
chr5:154898440\|154899310	AGO2	0	0	1
chr5:154898440\|154899310	AGO1	0	0	1
chr5:154898440\|154899310	EIF4A3	0	0	4
chr5:154898440\|154899310	FBL	0	0	1

CircRNA Information