CircRNA Information

General Information
circRNA Basic Information
CircID chr5:157858953|157859099
Strand -
CircType exon
Host Gene ENSG00000113282.12;
Algorism CIRI2;
Sequence CTTCCACATGTTCAACATCGTGCCCCGCGCGGGACGGTCCGCCGCCTCCCTCTCCTGCTCCCCACGGACCCCGGAACACTTCCGTACCGGGGCAGTTCCAGGCCGGGGTCACCGCCGCCCGCCGCCTCGAACTCCCCCAGTCAGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:157858953|157859099 hsa-miR-625-5p 0 0 1
chr5:157858953|157859099 hsa-miR-625-3p 0 0 1
chr5:157858953|157859099 hsa-miR-637 1 1 1
chr5:157858953|157859099 hsa-miR-653-5p 0 0 1
chr5:157858953|157859099 hsa-miR-653-3p 0 0 1
chr5:157858953|157859099 hsa-miR-744-5p 0 0 1
chr5:157858953|157859099 hsa-miR-744-3p 0 0 1
chr5:157858953|157859099 hsa-miR-939-5p 0 0 1
chr5:157858953|157859099 hsa-miR-939-3p 0 0 1
chr5:157858953|157859099 hsa-miR-1234-3p 0 0 1
chr5:157858953|157859099 hsa-miR-1275 0 0 1
chr5:157858953|157859099 hsa-miR-1321 0 0 1
chr5:157858953|157859099 hsa-miR-1234 0 0 1
chr5:157858953|157859099 hsa-miR-491-5p 1 0 1
chr5:157858953|157859099 hsa-miR-615-5p 1 1 1
chr5:157858953|157859099 hsa-miR-324-3p 0 0 1
chr5:157858953|157859099 hsa-miR-1254 0 0 1
chr5:157858953|157859099 hsa-miR-623 1 0 0
chr5:157858953|157859099 hsa-miR-663a 1 0 0
chr5:157858953|157859099 hsa-miR-762 1 0 0
chr5:157858953|157859099 hsa-miR-936 1 0 0
chr5:157858953|157859099 hsa-miR-1469 1 0 0
chr5:157858953|157859099 hsa-miR-1471 1 0 0
chr5:157858953|157859099 hsa-miR-3147 1 0 0
chr5:157858953|157859099 hsa-miR-3176 0 1 0
chr5:157858953|157859099 hsa-miR-4449 1 0 0
chr5:157858953|157859099 hsa-miR-4466 1 0 0
chr5:157858953|157859099 hsa-miR-4467 0 1 0
chr5:157858953|157859099 hsa-miR-4488 1 0 0
chr5:157858953|157859099 hsa-miR-3960 1 1 0
chr5:157858953|157859099 hsa-miR-4688 1 0 0
chr5:157858953|157859099 hsa-miR-4706 1 0 0
chr5:157858953|157859099 hsa-miR-4739 1 1 0
chr5:157858953|157859099 hsa-miR-4767 1 1 0
chr5:157858953|157859099 hsa-miR-5090 1 1 0
chr5:157858953|157859099 hsa-miR-5698 1 1 0
chr5:157858953|157859099 hsa-miR-5705 1 0 0
chr5:157858953|157859099 hsa-miR-5787 1 0 0
chr5:157858953|157859099 hsa-miR-6081 1 1 0
chr5:157858953|157859099 hsa-miR-6090 1 0 0
chr5:157858953|157859099 hsa-miR-6125 1 0 0
chr5:157858953|157859099 hsa-miR-6127 0 1 0
chr5:157858953|157859099 hsa-miR-6133 0 1 0
chr5:157858953|157859099 hsa-miR-6165 0 1 0
chr5:157858953|157859099 hsa-miR-7704 1 0 0
chr5:157858953|157859099 hsa-miR-8072 0 1 0
chr5:157858953|157859099 hsa-miR-8077 1 0 0
chr5:157858953|157859099 hsa-miR-8089 1 1 0
chr5:157858953|157859099 hsa-miR-12119 1 0 0
chr5:157858953|157859099 hsa-miR-4433b-3p 1 0 0
chr5:157858953|157859099 hsa-miR-6734-5p 1 0 0
chr5:157858953|157859099 hsa-miR-7155-5p 1 0 0
chr5:157858953|157859099 hsa-miR-4433a-3p 1 0 0
chr5:157858953|157859099 hsa-miR-3150a-3p 1 0 0
chr5:157858953|157859099 hsa-miR-7106-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6825-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6510-5p 1 1 0
chr5:157858953|157859099 hsa-miR-6746-5p 1 1 0
chr5:157858953|157859099 hsa-miR-4722-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6727-5p 1 0 0
chr5:157858953|157859099 hsa-miR-1288-3p 0 1 0
chr5:157858953|157859099 hsa-miR-6742-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6796-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6827-5p 1 0 0
chr5:157858953|157859099 hsa-miR-23a-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6798-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6810-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6786-5p 1 0 0
chr5:157858953|157859099 hsa-miR-7109-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6784-5p 1 0 0
chr5:157858953|157859099 hsa-miR-4690-5p 1 0 0
chr5:157858953|157859099 hsa-miR-149-3p 1 0 0
chr5:157858953|157859099 hsa-miR-193a-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6789-5p 1 0 0
chr5:157858953|157859099 hsa-miR-423-5p 1 0 0
chr5:157858953|157859099 hsa-miR-1225-5p 1 0 0
chr5:157858953|157859099 hsa-miR-4707-5p 1 1 0
chr5:157858953|157859099 hsa-miR-10400-5p 1 1 0
chr5:157858953|157859099 hsa-miR-1233-5p 1 0 0
chr5:157858953|157859099 hsa-miR-4763-3p 1 0 0
chr5:157858953|157859099 hsa-miR-6778-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6870-5p 0 1 0
chr5:157858953|157859099 hsa-miR-6775-5p 1 1 0
chr5:157858953|157859099 hsa-miR-1343-5p 1 0 0
chr5:157858953|157859099 hsa-miR-5001-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6726-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6743-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6752-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6756-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6803-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6851-5p 1 0 0
chr5:157858953|157859099 hsa-miR-1249-5p 1 1 0
chr5:157858953|157859099 hsa-miR-6722-3p 1 0 0
chr5:157858953|157859099 hsa-miR-6763-5p 1 1 0
chr5:157858953|157859099 hsa-miR-6879-5p 1 0 0
chr5:157858953|157859099 hsa-miR-7111-5p 1 1 0
chr5:157858953|157859099 hsa-miR-4728-5p 1 0 0
chr5:157858953|157859099 hsa-miR-10396a-5p 1 1 0
chr5:157858953|157859099 hsa-miR-10396b-5p 1 0 0
chr5:157858953|157859099 hsa-miR-1237-5p 1 0 0
chr5:157858953|157859099 hsa-miR-328-5p 1 1 0
chr5:157858953|157859099 hsa-miR-4745-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6777-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6846-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6848-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6889-5p 1 0 0
chr5:157858953|157859099 hsa-miR-4697-5p 1 0 0
chr5:157858953|157859099 hsa-miR-4723-5p 1 0 0
chr5:157858953|157859099 hsa-miR-6885-5p 1 0 0
chr5:157858953|157859099 hsa-miR-10394-3p 1 0 0
chr5:157858953|157859099 hsa-miR-3198 1 0 0
chr5:157858953|157859099 hsa-miR-4665-5p 1 1 0
chr5:157858953|157859099 hsa-miR-3116 0 1 0
chr5:157858953|157859099 hsa-miR-4667-5p 1 1 0
chr5:157858953|157859099 hsa-miR-6791-5p 1 0 0
chr5:157858953|157859099 hsa-miR-4756-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr5:157858953|157859099
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MLPTDPGTLPYRGSSRPGSPPPAASNSPSQL
Nucleotide Sequence CTGCTCCCCACGGACCCCGGAACACTTCCGTACCGGGGCAGTTCCAGGCCGGGGTCACCGCCGCCCGCCGCCTCGAACTCCCCCAGTCAGCTC
CircID chr5:157858953|157859099
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MFNIVPRAGRSAASLSCSPRTPEHFRTGAVPGRGHRRPPPRTPPVS
Nucleotide Sequence ATGTTCAACATCGTGCCCCGCGCGGGACGGTCCGCCGCCTCCCTCTCCTGCTCCCCACGGACCCCGGAACACTTCCGTACCGGGGCAGTTCCAGGCCGGGGTCACCGCCGCCCGCCGCCTCGAACTCCCCCAGTCAGC
CircID chr5:157858953|157859099
ORF Type ORF3
Protein Length 42
Nucleotide Length 129
Protein Sequence MGEFEAAGGGDPGLELPRYGSVPGSVGSRRGRRRTVPRGARC
Nucleotide Sequence CTGGGGGAGTTCGAGGCGGCGGGCGGCGGTGACCCCGGCCTGGAACTGCCCCGGTACGGAAGTGTTCCGGGGTCCGTGGGGAGCAGGAGAGGGAGGCGGCGGACCGTCCCGCGCGGGGCACGATGTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab