CircRNA Information

General Information
circRNA Basic Information
CircID chr5:160259597|160259748
Strand +
CircType exon
Host Gene ENSG00000135083.13;
Algorism CIRI2;
Sequence CACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTCACCAAGAAGGAGCTGCTGAGCACAGAGCTGCTGCTCCTGGAGGCCTTCAGCTGGAACCTCTGCCTGCCCACGCCTGCCCACTTCCTGGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:160259597|160259748 hsa-miR-15a-5p 0 0 1
chr5:160259597|160259748 hsa-miR-15a-3p 0 0 1
chr5:160259597|160259748 hsa-miR-214-5p 0 0 1
chr5:160259597|160259748 hsa-miR-214-3p 0 0 1
chr5:160259597|160259748 hsa-miR-15b-5p 0 0 1
chr5:160259597|160259748 hsa-miR-15b-3p 0 0 1
chr5:160259597|160259748 hsa-miR-149-5p 0 0 1
chr5:160259597|160259748 hsa-miR-149-3p 0 0 1
chr5:160259597|160259748 hsa-miR-195-5p 0 0 1
chr5:160259597|160259748 hsa-miR-195-3p 0 0 1
chr5:160259597|160259748 hsa-miR-424-5p 0 0 1
chr5:160259597|160259748 hsa-miR-424-3p 0 0 1
chr5:160259597|160259748 hsa-miR-497-5p 0 0 1
chr5:160259597|160259748 hsa-miR-497-3p 0 0 1
chr5:160259597|160259748 hsa-miR-604 0 0 1
chr5:160259597|160259748 hsa-miR-646 0 1 1
chr5:160259597|160259748 hsa-miR-647 0 0 1
chr5:160259597|160259748 hsa-miR-665 0 0 1
chr5:160259597|160259748 hsa-miR-922 0 0 1
chr5:160259597|160259748 hsa-miR-1237-5p 0 0 1
chr5:160259597|160259748 hsa-miR-1237-3p 0 0 1
chr5:160259597|160259748 hsa-miR-1248 0 0 1
chr5:160259597|160259748 hsa-miR-767-3p 0 0 1
chr5:160259597|160259748 hsa-miR-16 0 0 1
chr5:160259597|160259748 hsa-miR-612 1 0 0
chr5:160259597|160259748 hsa-miR-1268a 1 0 0
chr5:160259597|160259748 hsa-miR-3138 1 0 0
chr5:160259597|160259748 hsa-miR-3141 1 0 0
chr5:160259597|160259748 hsa-miR-4270 1 0 0
chr5:160259597|160259748 hsa-miR-4277 0 1 0
chr5:160259597|160259748 hsa-miR-3665 1 0 0
chr5:160259597|160259748 hsa-miR-3937 1 0 0
chr5:160259597|160259748 hsa-miR-1268b 1 0 0
chr5:160259597|160259748 hsa-miR-4466 1 0 0
chr5:160259597|160259748 hsa-miR-4488 1 0 0
chr5:160259597|160259748 hsa-miR-4498 1 0 0
chr5:160259597|160259748 hsa-miR-4507 1 0 0
chr5:160259597|160259748 hsa-miR-1587 1 0 0
chr5:160259597|160259748 hsa-miR-4651 1 0 0
chr5:160259597|160259748 hsa-miR-4656 1 0 0
chr5:160259597|160259748 hsa-miR-4660 0 1 0
chr5:160259597|160259748 hsa-miR-4673 1 0 0
chr5:160259597|160259748 hsa-miR-4692 0 1 0
chr5:160259597|160259748 hsa-miR-4710 1 0 0
chr5:160259597|160259748 hsa-miR-4736 1 0 0
chr5:160259597|160259748 hsa-miR-4767 1 0 0
chr5:160259597|160259748 hsa-miR-6127 1 0 0
chr5:160259597|160259748 hsa-miR-6860 1 0 0
chr5:160259597|160259748 hsa-miR-12126 0 1 0
chr5:160259597|160259748 hsa-miR-12127 0 1 0
chr5:160259597|160259748 hsa-miR-4433b-3p 1 0 0
chr5:160259597|160259748 hsa-miR-4433a-3p 1 0 0
chr5:160259597|160259748 hsa-miR-6861-5p 1 0 0
chr5:160259597|160259748 hsa-miR-6799-5p 1 0 0
chr5:160259597|160259748 hsa-miR-3934-5p 1 0 0
chr5:160259597|160259748 hsa-miR-3064-5p 0 1 0
chr5:160259597|160259748 hsa-miR-6806-5p 1 0 0
chr5:160259597|160259748 hsa-miR-6721-5p 1 1 0
chr5:160259597|160259748 hsa-miR-6716-5p 1 0 0
chr5:160259597|160259748 hsa-miR-2467-3p 1 0 0
chr5:160259597|160259748 hsa-miR-6782-5p 1 0 0
chr5:160259597|160259748 hsa-miR-3934-3p 0 1 0
chr5:160259597|160259748 hsa-miR-1226-5p 1 0 0
chr5:160259597|160259748 hsa-miR-3944-3p 1 0 0
chr5:160259597|160259748 hsa-miR-1229-5p 1 0 0
chr5:160259597|160259748 hsa-miR-1228-5p 1 0 0
chr5:160259597|160259748 hsa-miR-4690-5p 1 0 0
chr5:160259597|160259748 hsa-miR-3677-3p 1 0 0
chr5:160259597|160259748 hsa-miR-6749-5p 1 0 0
chr5:160259597|160259748 hsa-miR-4787-5p 1 0 0
chr5:160259597|160259748 hsa-miR-7112-5p 1 0 0
chr5:160259597|160259748 hsa-miR-4661-3p 0 1 0
chr5:160259597|160259748 hsa-miR-2277-5p 1 0 0
chr5:160259597|160259748 hsa-miR-1207-5p 1 0 0
chr5:160259597|160259748 hsa-miR-1233-5p 1 0 0
chr5:160259597|160259748 hsa-miR-4763-3p 1 0 0
chr5:160259597|160259748 hsa-miR-6778-5p 1 0 0
chr5:160259597|160259748 hsa-miR-6787-5p 1 0 0
chr5:160259597|160259748 hsa-miR-6816-5p 1 0 0
chr5:160259597|160259748 hsa-miR-6756-5p 1 0 0
chr5:160259597|160259748 hsa-miR-6803-5p 1 1 0
chr5:160259597|160259748 hsa-miR-6851-5p 1 0 0
chr5:160259597|160259748 hsa-miR-10401-5p 1 1 0
chr5:160259597|160259748 hsa-miR-6722-3p 1 0 0
chr5:160259597|160259748 hsa-miR-6751-5p 1 1 0
chr5:160259597|160259748 hsa-miR-6780a-5p 1 0 0
chr5:160259597|160259748 hsa-miR-6879-5p 1 0 0
chr5:160259597|160259748 hsa-miR-3620-5p 1 0 0
chr5:160259597|160259748 hsa-miR-4728-5p 1 0 0
chr5:160259597|160259748 hsa-miR-328-5p 1 0 0
chr5:160259597|160259748 hsa-miR-4632-5p 0 1 0
chr5:160259597|160259748 hsa-miR-4649-5p 1 0 0
chr5:160259597|160259748 hsa-miR-6729-5p 1 0 0
chr5:160259597|160259748 hsa-miR-6735-5p 1 0 0
chr5:160259597|160259748 hsa-miR-3187-5p 1 0 0
chr5:160259597|160259748 hsa-miR-4758-5p 1 0 0
chr5:160259597|160259748 hsa-miR-6511a-5p 1 1 0
chr5:160259597|160259748 hsa-miR-6511b-5p 1 1 0
chr5:160259597|160259748 hsa-miR-3940-5p 1 0 0
chr5:160259597|160259748 hsa-miR-5008-3p 0 1 0
chr5:160259597|160259748 hsa-miR-7843-5p 1 0 0
chr5:160259597|160259748 hsa-miR-6785-5p 1 0 0
chr5:160259597|160259748 hsa-miR-3085-3p 0 1 0
chr5:160259597|160259748 hsa-miR-6874-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr5:160259597|160259748
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MEQINSTRILSSQNFTLTKKELLSTELLLLEAFSWNLCLPTPAHFL
Nucleotide Sequence TTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTCACCAAGAAGGAGCTGCTGAGCACAGAGCTGCTGCTCCTGGAGGCCTTCAGCTGGAACCTCTGCCTGCCCACGCCTGCCCACTTCCTG
CircID chr5:160259597|160259748
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MKASRSSSSVLSSSFLVRVKFWLLRILVLFICSNLGT
Nucleotide Sequence CTGAAGGCCTCCAGGAGCAGCAGCTCTGTGCTCAGCAGCTCCTTCTTGGTGAGGGTGAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTGGGGACG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab