CircRNA Information

General Information
circRNA Basic Information
CircID chr5:172690462|172690592
Strand +
CircType exon
Host Gene ENSG00000214357.7;
Algorism CIRI2;
Sequence CTCTGCCAGCATCACAGCTGGGGCACAGTCCTCTCTGCTCTATCCTCACAGCACCTCACACGTACTAGGTACTCAGCAAATGTTTCTGGAGTATCTTTGTGTGCGTTATGTGGTGCTGTTTTATCAAACCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:172690462|172690592 hsa-miR-29a-5p 0 0 1
chr5:172690462|172690592 hsa-miR-29a-3p 0 0 1
chr5:172690462|172690592 hsa-miR-29c-5p 0 0 1
chr5:172690462|172690592 hsa-miR-29c-3p 0 0 1
chr5:172690462|172690592 hsa-miR-494-5p 0 0 1
chr5:172690462|172690592 hsa-miR-494-3p 0 0 1
chr5:172690462|172690592 hsa-miR-1294 0 0 1
chr5:172690462|172690592 hsa-miR-508-5p 0 0 1
chr5:172690462|172690592 hsa-miR-628-5p 0 0 1
chr5:172690462|172690592 hsa-miR-29b 0 0 1
chr5:172690462|172690592 hsa-miR-1185 0 0 1
chr5:172690462|172690592 hsa-miR-608 1 0 0
chr5:172690462|172690592 hsa-miR-2278 0 1 0
chr5:172690462|172690592 hsa-miR-3132 1 0 0
chr5:172690462|172690592 hsa-miR-3169 0 1 0
chr5:172690462|172690592 hsa-miR-4451 1 0 0
chr5:172690462|172690592 hsa-miR-4468 0 1 0
chr5:172690462|172690592 hsa-miR-2392 1 1 0
chr5:172690462|172690592 hsa-miR-6069 1 0 0
chr5:172690462|172690592 hsa-miR-7974 0 1 0
chr5:172690462|172690592 hsa-miR-8082 0 1 0
chr5:172690462|172690592 hsa-miR-8085 1 0 0
chr5:172690462|172690592 hsa-miR-197-5p 1 0 0
chr5:172690462|172690592 hsa-miR-3189-5p 1 0 0
chr5:172690462|172690592 hsa-miR-6742-5p 1 0 0
chr5:172690462|172690592 hsa-miR-3605-5p 1 1 0
chr5:172690462|172690592 hsa-miR-6796-5p 1 0 0
chr5:172690462|172690592 hsa-miR-4732-5p 0 1 0
chr5:172690462|172690592 hsa-miR-6889-3p 0 1 0
chr5:172690462|172690592 hsa-miR-361-3p 0 1 0
chr5:172690462|172690592 hsa-miR-6812-5p 1 1 0
chr5:172690462|172690592 hsa-miR-1249-5p 1 0 0
chr5:172690462|172690592 hsa-miR-6846-5p 1 0 0
chr5:172690462|172690592 hsa-miR-6858-5p 1 0 0
chr5:172690462|172690592 hsa-miR-6831-5p 1 0 0
chr5:172690462|172690592 hsa-miR-6856-5p 0 1 0
chr5:172690462|172690592 hsa-miR-3679-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr5:172690462|172690592
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MLYPHSTSHVLGTQQMFLEYLCVRYVVLFYQT
Nucleotide Sequence CTGCTCTATCCTCACAGCACCTCACACGTACTAGGTACTCAGCAAATGTTTCTGGAGTATCTTTGTGTGCGTTATGTGGTGCTGTTTTATCAAACC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites