CircRNA Information

General Information
circRNA Basic Information
CircID chr5:172951312|172951425
Strand -
CircType exon
Host Gene ENSG00000113719.14;
Algorism CIRI2;
Sequence ACCCGGCACCTTCCACGAAAGATGGTACTTCCCAAGCAAGCCCCTATGATTTGTCACTATAGATGGAACCCTGACTTCTGCCCCATCCCTTCCTGCCCAACCTAGAACCCAGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:172951312|172951425 hsa-miR-18a-5p 0 0 1
chr5:172951312|172951425 hsa-miR-18a-3p 0 0 1
chr5:172951312|172951425 hsa-miR-18b-5p 0 0 1
chr5:172951312|172951425 hsa-miR-18b-3p 0 0 1
chr5:172951312|172951425 hsa-miR-661 0 1 1
chr5:172951312|172951425 hsa-miR-298 1 1 1
chr5:172951312|172951425 hsa-miR-486-3p 1 1 1
chr5:172951312|172951425 hsa-miR-587 1 0 0
chr5:172951312|172951425 hsa-miR-608 1 0 0
chr5:172951312|172951425 hsa-miR-637 1 0 0
chr5:172951312|172951425 hsa-miR-762 1 0 0
chr5:172951312|172951425 hsa-miR-760 1 0 0
chr5:172951312|172951425 hsa-miR-3141 1 0 0
chr5:172951312|172951425 hsa-miR-3147 1 1 0
chr5:172951312|172951425 hsa-miR-3154 1 0 0
chr5:172951312|172951425 hsa-miR-3196 1 0 0
chr5:172951312|172951425 hsa-miR-4298 1 0 0
chr5:172951312|172951425 hsa-miR-4260 1 0 0
chr5:172951312|172951425 hsa-miR-4270 1 0 0
chr5:172951312|172951425 hsa-miR-3936 1 0 0
chr5:172951312|172951425 hsa-miR-4476 0 1 0
chr5:172951312|172951425 hsa-miR-3689c 1 0 0
chr5:172951312|172951425 hsa-miR-4498 1 0 0
chr5:172951312|172951425 hsa-miR-4505 1 0 0
chr5:172951312|172951425 hsa-miR-2392 1 0 0
chr5:172951312|172951425 hsa-miR-4507 1 0 0
chr5:172951312|172951425 hsa-miR-4514 1 0 0
chr5:172951312|172951425 hsa-miR-1587 1 0 0
chr5:172951312|172951425 hsa-miR-4651 1 0 0
chr5:172951312|172951425 hsa-miR-4688 1 0 0
chr5:172951312|172951425 hsa-miR-4739 1 0 0
chr5:172951312|172951425 hsa-miR-5090 1 0 0
chr5:172951312|172951425 hsa-miR-5194 1 0 0
chr5:172951312|172951425 hsa-miR-5698 1 0 0
chr5:172951312|172951425 hsa-miR-5787 1 0 0
chr5:172951312|172951425 hsa-miR-6085 1 0 0
chr5:172951312|172951425 hsa-miR-6086 1 0 0
chr5:172951312|172951425 hsa-miR-6090 1 0 0
chr5:172951312|172951425 hsa-miR-6133 1 0 0
chr5:172951312|172951425 hsa-miR-6860 1 0 0
chr5:172951312|172951425 hsa-miR-125b-2-3p 1 0 0
chr5:172951312|172951425 hsa-miR-4433b-3p 1 0 0
chr5:172951312|172951425 hsa-miR-6734-5p 1 0 0
chr5:172951312|172951425 hsa-miR-7155-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6747-5p 1 0 0
chr5:172951312|172951425 hsa-miR-4433a-3p 1 0 0
chr5:172951312|172951425 hsa-miR-6861-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6799-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6728-5p 1 0 0
chr5:172951312|172951425 hsa-miR-1236-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6757-5p 1 1 0
chr5:172951312|172951425 hsa-miR-4722-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6890-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6741-5p 1 0 0
chr5:172951312|172951425 hsa-miR-3622b-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6721-5p 1 0 0
chr5:172951312|172951425 hsa-miR-23b-5p 0 1 0
chr5:172951312|172951425 hsa-miR-197-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6776-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6716-5p 1 0 0
chr5:172951312|172951425 hsa-miR-3151-5p 1 0 0
chr5:172951312|172951425 hsa-miR-1292-5p 1 0 0
chr5:172951312|172951425 hsa-miR-3180-3p 1 0 0
chr5:172951312|172951425 hsa-miR-6793-5p 1 1 0
chr5:172951312|172951425 hsa-miR-3190-3p 0 1 0
chr5:172951312|172951425 hsa-miR-23a-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6782-5p 1 1 0
chr5:172951312|172951425 hsa-miR-6786-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6835-5p 1 0 0
chr5:172951312|172951425 hsa-miR-1229-5p 1 0 0
chr5:172951312|172951425 hsa-miR-193b-5p 1 0 0
chr5:172951312|172951425 hsa-miR-1228-5p 1 0 0
chr5:172951312|172951425 hsa-miR-296-3p 1 0 0
chr5:172951312|172951425 hsa-miR-6823-5p 1 0 0
chr5:172951312|172951425 hsa-miR-92b-5p 1 0 0
chr5:172951312|172951425 hsa-miR-149-3p 1 0 0
chr5:172951312|172951425 hsa-miR-937-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6824-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6789-5p 1 0 0
chr5:172951312|172951425 hsa-miR-3162-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6781-5p 1 0 0
chr5:172951312|172951425 hsa-miR-1225-5p 1 0 0
chr5:172951312|172951425 hsa-miR-4750-5p 1 0 0
chr5:172951312|172951425 hsa-miR-5585-5p 0 1 0
chr5:172951312|172951425 hsa-miR-1207-5p 1 0 0
chr5:172951312|172951425 hsa-miR-3689b-3p 1 0 0
chr5:172951312|172951425 hsa-miR-4763-3p 1 0 0
chr5:172951312|172951425 hsa-miR-6816-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6870-5p 1 0 0
chr5:172951312|172951425 hsa-miR-5001-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6737-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6743-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6754-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6756-5p 1 1 0
chr5:172951312|172951425 hsa-miR-6813-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6819-5p 1 0 0
chr5:172951312|172951425 hsa-miR-10401-5p 1 0 0
chr5:172951312|172951425 hsa-miR-1249-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6722-3p 1 0 0
chr5:172951312|172951425 hsa-miR-6763-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6774-5p 1 1 0
chr5:172951312|172951425 hsa-miR-6779-5p 1 1 0
chr5:172951312|172951425 hsa-miR-6780a-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6797-5p 1 1 0
chr5:172951312|172951425 hsa-miR-6808-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6879-5p 1 0 0
chr5:172951312|172951425 hsa-miR-3620-5p 1 0 0
chr5:172951312|172951425 hsa-miR-4728-5p 1 1 0
chr5:172951312|172951425 hsa-miR-5196-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6780b-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6862-5p 1 0 0
chr5:172951312|172951425 hsa-miR-10396b-5p 1 0 0
chr5:172951312|172951425 hsa-miR-328-5p 1 0 0
chr5:172951312|172951425 hsa-miR-3689a-3p 1 0 0
chr5:172951312|172951425 hsa-miR-4725-3p 1 0 0
chr5:172951312|172951425 hsa-miR-6735-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6777-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6846-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6848-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6883-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6889-5p 1 0 0
chr5:172951312|172951425 hsa-miR-3187-5p 1 0 0
chr5:172951312|172951425 hsa-miR-4436b-3p 1 1 0
chr5:172951312|172951425 hsa-miR-4769-5p 1 0 0
chr5:172951312|172951425 hsa-miR-1910-3p 1 0 0
chr5:172951312|172951425 hsa-miR-6511a-5p 1 0 0
chr5:172951312|172951425 hsa-miR-3940-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6855-5p 1 0 0
chr5:172951312|172951425 hsa-miR-4646-5p 1 0 0
chr5:172951312|172951425 hsa-miR-4747-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6876-5p 1 1 0
chr5:172951312|172951425 hsa-miR-6891-5p 1 0 0
chr5:172951312|172951425 hsa-miR-6766-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr5:172951312|172951425
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MVLPKQAPMICHYRWNPDFCPIPSCPT
Nucleotide Sequence ATGGTACTTCCCAAGCAAGCCCCTATGATTTGTCACTATAGATGGAACCCTGACTTCTGCCCCATCCCTTCCTGCCCAACCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab