CircRNA Information

General Information
circRNA Basic Information
CircID chr5:172951486|172951682
Strand +
CircType exon
Host Gene ENSG00000113719.14;
Algorism CIRI2;
Sequence AACCCCCACTCCCTGCCACTGCAGATCCCAGCAGAGTGGTGGGAGATCTTGGCAGTGGGAACCAGAATGCTGTTGCCACACAGCACACAGGCTGAGGCACATTGGTGGAGGGTTCAGAGGAACGAGGAGAAGAGAGGAAGAGGAATCTGTGACCCGCCTTGTGACTGGTGGGCAGATTCAAGTCTCTACCGCTGCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:172951486|172951682 hsa-miR-150-5p 0 0 1
chr5:172951486|172951682 hsa-miR-150-3p 0 0 1
chr5:172951486|172951682 hsa-miR-503-5p 0 0 1
chr5:172951486|172951682 hsa-miR-503-3p 0 0 1
chr5:172951486|172951682 hsa-miR-638 0 0 1
chr5:172951486|172951682 hsa-miR-942-5p 0 0 1
chr5:172951486|172951682 hsa-miR-942-3p 0 0 1
chr5:172951486|172951682 hsa-miR-1179 0 1 1
chr5:172951486|172951682 hsa-miR-1236-5p 0 0 1
chr5:172951486|172951682 hsa-miR-1236-3p 0 0 1
chr5:172951486|172951682 hsa-miR-1205 0 0 1
chr5:172951486|172951682 hsa-miR-513b-5p 0 0 1
chr5:172951486|172951682 hsa-miR-513b-3p 0 0 1
chr5:172951486|172951682 hsa-miR-532-3p 0 0 1
chr5:172951486|172951682 hsa-miR-1184 0 0 1
chr5:172951486|172951682 hsa-miR-1224-3p 0 0 1
chr5:172951486|172951682 hsa-miR-188-3p 0 0 1
chr5:172951486|172951682 hsa-miR-455-5p 0 0 1
chr5:172951486|172951682 hsa-miR-1207-5p 0 1 1
chr5:172951486|172951682 hsa-miR-324-3p 0 1 1
chr5:172951486|172951682 hsa-miR-769-3p 0 1 1
chr5:172951486|172951682 hsa-miR-450b-3p 0 0 1
chr5:172951486|172951682 hsa-miR-1260 0 0 1
chr5:172951486|172951682 hsa-miR-1280 0 0 1
chr5:172951486|172951682 hsa-miR-550 0 0 1
chr5:172951486|172951682 hsa-miR-644 0 0 1
chr5:172951486|172951682 hsa-miR-147 0 0 1
chr5:172951486|172951682 hsa-miR-147a 0 1 0
chr5:172951486|172951682 hsa-miR-1260a 0 1 0
chr5:172951486|172951682 hsa-miR-1470 1 0 0
chr5:172951486|172951682 hsa-miR-1260b 0 1 0
chr5:172951486|172951682 hsa-miR-4302 0 1 0
chr5:172951486|172951682 hsa-miR-4312 1 0 0
chr5:172951486|172951682 hsa-miR-4326 1 1 0
chr5:172951486|172951682 hsa-miR-4270 0 1 0
chr5:172951486|172951682 hsa-miR-3921 1 0 0
chr5:172951486|172951682 hsa-miR-3960 1 0 0
chr5:172951486|172951682 hsa-miR-4686 0 1 0
chr5:172951486|172951682 hsa-miR-7150 0 1 0
chr5:172951486|172951682 hsa-miR-12122 0 1 0
chr5:172951486|172951682 hsa-miR-141-5p 0 1 0
chr5:172951486|172951682 hsa-miR-17-3p 0 1 0
chr5:172951486|172951682 hsa-miR-6881-3p 1 1 0
chr5:172951486|172951682 hsa-miR-3692-5p 0 1 0
chr5:172951486|172951682 hsa-miR-6845-3p 1 0 0
chr5:172951486|172951682 hsa-miR-877-3p 1 1 0
chr5:172951486|172951682 hsa-miR-6728-3p 0 1 0
chr5:172951486|172951682 hsa-miR-6716-3p 1 0 0
chr5:172951486|172951682 hsa-miR-4713-5p 0 1 0
chr5:172951486|172951682 hsa-miR-5187-3p 1 0 0
chr5:172951486|172951682 hsa-miR-6809-3p 1 1 0
chr5:172951486|172951682 hsa-miR-7111-3p 1 1 0
chr5:172951486|172951682 hsa-miR-6780a-3p 0 1 0
chr5:172951486|172951682 hsa-miR-4646-3p 1 0 0
chr5:172951486|172951682 hsa-miR-211-5p 1 0 0
chr5:172951486|172951682 hsa-miR-1238-3p 1 0 0
chr5:172951486|172951682 hsa-miR-5088-3p 1 0 0
chr5:172951486|172951682 hsa-miR-6795-3p 1 0 0
chr5:172951486|172951682 hsa-miR-6777-3p 0 1 0
chr5:172951486|172951682 hsa-miR-6890-3p 0 1 0
chr5:172951486|172951682 hsa-miR-3156-3p 0 1 0
chr5:172951486|172951682 hsa-miR-4763-3p 0 1 0
chr5:172951486|172951682 hsa-miR-6754-5p 0 1 0
chr5:172951486|172951682 hsa-miR-320a-5p 1 0 0
chr5:172951486|172951682 hsa-miR-6754-3p 1 1 0
chr5:172951486|172951682 hsa-miR-3059-5p 1 1 0
chr5:172951486|172951682 hsa-miR-4723-3p 1 1 0
chr5:172951486|172951682 hsa-miR-33b-3p 1 0 0
chr5:172951486|172951682 hsa-miR-619-5p 0 1 0
chr5:172951486|172951682 hsa-miR-6781-3p 1 0 0
chr5:172951486|172951682 hsa-miR-412-3p 1 0 0
chr5:172951486|172951682 hsa-miR-6506-5p 0 1 0
chr5:172951486|172951682 hsa-miR-7157-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr5:172951486|172951682
ORF Type ORF1
Protein Length 61
Nucleotide Length 183
Protein Sequence MPLQIPAEWWEILAVGTRMLLPHSTQAEAHWWRVQRNEEKRGRGICDPPCDWWADSSLYRC
Nucleotide Sequence CTGCCACTGCAGATCCCAGCAGAGTGGTGGGAGATCTTGGCAGTGGGAACCAGAATGCTGTTGCCACACAGCACACAGGCTGAGGCACATTGGTGGAGGGTTCAGAGGAACGAGGAGAAGAGAGGAAGAGGAATCTGTGACCCGCCTTGTGACTGGTGGGCAGATTCAAGTCTCTACCGCTGC
CircID chr5:172951486|172951682
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MRHIGGGFRGTRRREEEESVTRLVTGGQIQVSTAA
Nucleotide Sequence CTGAGGCACATTGGTGGAGGGTTCAGAGGAACGAGGAGAAGAGAGGAAGAGGAATCTGTGACCCGCCTTGTGACTGGTGGGCAGATTCAAGTCTCTACCGCTGCT
CircID chr5:172951486|172951682
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MCGNSILVPTAKISHHSAGICSGREWG
Nucleotide Sequence CTGTGTGGCAACAGCATTCTGGTTCCCACTGCCAAGATCTCCCACCACTCTGCTGGGATCTGCAGTGGCAGGGAGTGGGGG
CircID chr5:172951486|172951682
ORF Type ORF4
Protein Length 60
Nucleotide Length 180
Protein Sequence MNLPTSHKAGHRFLFLSSPRSSEPSTNVPQPVCCVATAFWFPLPRSPTTLLGSAVAGSGG
Nucleotide Sequence TTGAATCTGCCCACCAGTCACAAGGCGGGTCACAGATTCCTCTTCCTCTCTTCTCCTCGTTCCTCTGAACCCTCCACCAATGTGCCTCAGCCTGTGTGCTGTGTGGCAACAGCATTCTGGTTCCCACTGCCAAGATCTCCCACCACTCTGCTGGGATCTGCAGTGGCAGGGAGTGGGGGT
CircID chr5:172951486|172951682
ORF Type ORF5
Protein Length 39
Nucleotide Length 117
Protein Sequence MNPPPMCLSLCAVWQQHSGSHCQDLPPLCWDLQWQGVGV
Nucleotide Sequence CTGAACCCTCCACCAATGTGCCTCAGCCTGTGTGCTGTGTGGCAACAGCATTCTGGTTCCCACTGCCAAGATCTCCCACCACTCTGCTGGGATCTGCAGTGGCAGGGAGTGGGGGTT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab