CircNet

General Information

circRNA Basic Information

CircID	chr5:175510109\|175516663
Strand	+
CircType	exon
Host Gene	ENSG00000164466.12;
Algorism	CIRI2;DCC;find_circ;
Sequence	GACTACGCCGGCTGTGCTGTTCTGGCAGTGGATTAACCAGTCCTTCAATGCCGTCGTCAATTACACCAACAGAAGTGGAGACGCACCCCTCACTGTCAAGTAAGGCTACGAGAATTGACCACTCTCTGCAGTTCTTCAACCTTCATTTTATTAAGTGGTGATACTCTCCTGTTTAAAAAAGCCTATGTGTGCATATTTTTATATCTTTTTTCTTTTCAGTGAGTTGGGAACAGCTTACGTTTCTGCAACAACTGGTGCCGTAGCAACAGCTCTAGGACTCAATGCATTGACCAAGGTACTCAGATTTTTATTTCCATAATAAAGCTGTTTAATTTGTTATCACCTGCCCATGTCTCACCACTGATAGGACGTTTTGTTCCCTTTGCTGCCGTAGCTGCTGCTAATTGCATTAATATTCCATTAATGAGGCAAAGGGAACTCAAAGTTGGCATTCCCGTCACGGATGAGAATGGGAACCGCTTGGGGGAGTCGGCGAACGCTGCGAAACAAGCCATCACGCAAGTTGTCGTGTCCAGGATTCTCATGGCAGCCCCTGGCATGGGTTAGCAGGACTTTGTCATTTATTCCATAAATACAGGTTGAACCAGCGTTCACGGATCCGTGAACCAGAAAACAAACACATATATCACACCTCTTAGTGGAAATTGCCTTCCACTGGGGGTGGCAGAAAATAAACAAGTAAATAAAGTCCATCCCTCCATTCATTATGAACACTTTGGAAAAGAAAGCCTTTTTGAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:175510109\|175516663	hsa-miR-127-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:175510109\|175516663
ORF Type	ORF1
Protein Length	102
Nucleotide Length	306
Protein Sequence	MNGGMDFIYLFIFCHPQWKAISTKRCDICVCFLVHGSVNAGSTCIYGINDKVLLTHARGCHENPGHDNLRDGLFRSVRRLPQAVPILIRDGNANFEFPLPH*
Nucleotide Sequence	ATGAATGGAGGGATGGACTTTATTTACTTGTTTATTTTCTGCCACCCCCAGTGGAAGGCAATTTCCACTAAGAGGTGTGATATATGTGTTTGTTTTCTGGTTCACGGATCCGTGAACGCTGGTTCAACCTGTATTTATGGAATAAATGACAAAGTCCTGCTAACCCATGCCAGGGGCTGCCATGAGAATCCTGGACACGACAACTTGCGTGATGGCTTGTTTCGCAGCGTTCGCCGACTCCCCCAAGCGGTTCCCATTCTCATCCGTGACGGGAATGCCAACTTTGAGTTCCCTTTGCCTCATTAA

CircID	chr5:175510109\|175516663
ORF Type	ORF2
Protein Length	87
Nucleotide Length	261
Protein Sequence	MPGAAMRILDTTTCVMACFAAFADSPKRFPFSSVTGMPTLSSLCLINGILMQLAAATAAKGTKRPISGETWAGDNKLNSFIMEIKI*
Nucleotide Sequence	ATGCCAGGGGCTGCCATGAGAATCCTGGACACGACAACTTGCGTGATGGCTTGTTTCGCAGCGTTCGCCGACTCCCCCAAGCGGTTCCCATTCTCATCCGTGACGGGAATGCCAACTTTGAGTTCCCTTTGCCTCATTAATGGAATATTAATGCAATTAGCAGCAGCTACGGCAGCAAAGGGAACAAAACGTCCTATCAGTGGTGAGACATGGGCAGGTGATAACAAATTAAACAGCTTTATTATGGAAATAAAAATCTGA

CircID	chr5:175510109\|175516663
ORF Type	ORF3
Protein Length	48
Nucleotide Length	144
Protein Sequence	MRQRELKVGIPVTDENGNRLGESANAAKQAITQVVVSRILMAAPGMG*
Nucleotide Sequence	ATGAGGCAAAGGGAACTCAAAGTTGGCATTCCCGTCACGGATGAGAATGGGAACCGCTTGGGGGAGTCGGCGAACGCTGCGAAACAAGCCATCACGCAAGTTGTCGTGTCCAGGATTCTCATGGCAGCCCCTGGCATGGGTTAG

CircID	chr5:175510109\|175516663
ORF Type	ORF4
Protein Length	45
Nucleotide Length	135
Protein Sequence	MCAYFYIFFLFSELGTAYVSATTGAVATALGLNALTKVLRFLFP*
Nucleotide Sequence	ATGTGTGCATATTTTTATATCTTTTTTCTTTTCAGTGAGTTGGGAACAGCTTACGTTTCTGCAACAACTGGTGCCGTAGCAACAGCTCTAGGACTCAATGCATTGACCAAGGTACTCAGATTTTTATTTCCATAA

CircID	chr5:175510109\|175516663
ORF Type	ORF5
Protein Length	43
Nucleotide Length	129
Protein Sequence	MRMGTAWGSRRTLRNKPSRKLSCPGFSWQPLAWVSRTLSFIP*
Nucleotide Sequence	ATGAGAATGGGAACCGCTTGGGGGAGTCGGCGAACGCTGCGAAACAAGCCATCACGCAAGTTGTCGTGTCCAGGATTCTCATGGCAGCCCCTGGCATGGGTTAGCAGGACTTTGTCATTTATTCCATAA

CircID	chr5:175510109\|175516663
ORF Type	ORF6
Protein Length	38
Nucleotide Length	114
Protein Sequence	MPSSITPTEVETHPSLSSKATRIDHSLQFFNLHFIKW*
Nucleotide Sequence	ATGCCGTCGTCAATTACACCAACAGAAGTGGAGACGCACCCCTCACTGTCAAGTAAGGCTACGAGAATTGACCACTCTCTGCAGTTCTTCAACCTTCATTTTATTAAGTGGTGA

CircID	chr5:175510109\|175516663
ORF Type	ORF7
Protein Length	37
Nucleotide Length	111
Protein Sequence	MEGWTLFTCLFSATPSGRQFPLRGVIYVFVFWFTDP*
Nucleotide Sequence	ATGGAGGGATGGACTTTATTTACTTGTTTATTTTCTGCCACCCCCAGTGGAAGGCAATTTCCACTAAGAGGTGTGATATATGTGTTTGTTTTCTGGTTCACGGATCCGTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:175510109\|175516663	NOP56	2	3	1
chr5:175510109\|175516663	MOV10	2	0	1
chr5:175510109\|175516663	ELAVL1	5	8	4
chr5:175510109\|175516663	SF3B4	2	0	0
chr5:175510109\|175516663	FAM120A	0	0	1
chr5:175510109\|175516663	CELF2	2	0	1
chr5:175510109\|175516663	RTCB	0	0	1
chr5:175510109\|175516663	CNBP	1	2	1
chr5:175510109\|175516663	DDX42	2	0	1
chr5:175510109\|175516663	UPF1	4	0	0
chr5:175510109\|175516663	TAF15	0	3	1
chr5:175510109\|175516663	CAPRIN1	0	0	1
chr5:175510109\|175516663	FMR1	7	0	9
chr5:175510109\|175516663	CPSF6	2	0	1
chr5:175510109\|175516663	VIM	2	0	1
chr5:175510109\|175516663	AGO2	3	0	3
chr5:175510109\|175516663	DGCR8	0	0	3
chr5:175510109\|175516663	SRSF7	2	0	4
chr5:175510109\|175516663	SRSF1	6	1	11
chr5:175510109\|175516663	U2AF2	15	14	21
chr5:175510109\|175516663	U2AF1	4	0	9
chr5:175510109\|175516663	EIF3B	0	1	0
chr5:175510109\|175516663	KHSRP	3	0	2
chr5:175510109\|175516663	SRSF9	2	1	3
chr5:175510109\|175516663	DDX54	2	0	3
chr5:175510109\|175516663	EIF3G	0	1	0
chr5:175510109\|175516663	RBM10	5	2	0
chr5:175510109\|175516663	HNRNPA2B1	0	1	0
chr5:175510109\|175516663	SF3A3	2	0	0
chr5:175510109\|175516663	PTBP1	3	0	4
chr5:175510109\|175516663	TARDBP	4	1	3
chr5:175510109\|175516663	HNRNPD	1	0	0
chr5:175510109\|175516663	TRA2A	3	0	2
chr5:175510109\|175516663	METTL14	0	1	0
chr5:175510109\|175516663	DHX9	1	0	0
chr5:175510109\|175516663	WTAP	0	1	0
chr5:175510109\|175516663	HNRNPA1	4	3	0
chr5:175510109\|175516663	DDX3X	3	0	2
chr5:175510109\|175516663	XRN2	2	0	1
chr5:175510109\|175516663	LARP4B	0	0	2
chr5:175510109\|175516663	SMNDC1	3	0	1
chr5:175510109\|175516663	AUH	0	1	0
chr5:175510109\|175516663	ACIN1	3	3	6
chr5:175510109\|175516663	LIN28B	8	1	5
chr5:175510109\|175516663	LIN28A	0	1	0
chr5:175510109\|175516663	FXR1	3	0	2
chr5:175510109\|175516663	BCCIP	0	0	1
chr5:175510109\|175516663	SND1	0	0	3
chr5:175510109\|175516663	IGF2BP1	2	0	7
chr5:175510109\|175516663	DICER1	1	0	0
chr5:175510109\|175516663	IGF2BP3	3	0	8
chr5:175510109\|175516663	IGF2BP2	8	1	13
chr5:175510109\|175516663	NPM1	0	0	1
chr5:175510109\|175516663	NOP58	6	3	7
chr5:175510109\|175516663	HNRNPC	6	1	0
chr5:175510109\|175516663	BUD13	4	0	6
chr5:175510109\|175516663	PRPF8	6	6	8
chr5:175510109\|175516663	SLTM	0	1	2
chr5:175510109\|175516663	EIF4G2	1	0	1
chr5:175510109\|175516663	RBM47	2	0	2
chr5:175510109\|175516663	CSTF2T	1	0	0
chr5:175510109\|175516663	FXR2	4	0	3
chr5:175510109\|175516663	TIA1	0	1	1
chr5:175510109\|175516663	FUS	0	3	0
chr5:175510109\|175516663	NONO	1	0	0
chr5:175510109\|175516663	METTL3	0	1	0
chr5:175510109\|175516663	RBM22	1	1	3
chr5:175510109\|175516663	TIAL1	0	2	1
chr5:175510109\|175516663	DKC1	0	0	1
chr5:175510109\|175516663	HNRNPK	0	4	0
chr5:175510109\|175516663	ZC3H7B	1	0	0
chr5:175510109\|175516663	AIFM1	1	0	1
chr5:175510109\|175516663	AGO1	1	0	0
chr5:175510109\|175516663	EIF4A3	6	4	8
chr5:175510109\|175516663	FBL	5	2	6

CircRNA Information