CircNet

General Information

circRNA Basic Information

CircID	chr5:176479188\|176489027
Strand	+
CircType	exon
Host Gene	ENSG00000113194.12;
Algorism	find_circ;CIRI2;DCC;
Sequence	GATCTCACTGGCATCGAATCTATGGATCAGTGTCGCCATACCTTGGAACAGCATAACTGGAACATAGAGGCTGCTGTACAGGACAGATTGAATGAGCAAGAGGGCGTACCTAGTGTTTTCAACCCACCTCCATCACGACCCCTGCAGGTTAATACAGCTGACCACAGGATCTACAGCTATGTTGTCTCAAGACCTCAACCAAGGGGGCTGCTTGGATGGGGTTATTACTTGATAATGCTTCCATTCCGGTTTACCTATTACACGATACTTGATATATTTAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:176479188\|176489027
ORF Type	ORF1
Protein Length	86
Nucleotide Length	258
Protein Sequence	MDQCRHTLEQHNWNIEAAVQDRLNEQEGVPSVFNPPPSRPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIF
Nucleotide Sequence	ATGGATCAGTGTCGCCATACCTTGGAACAGCATAACTGGAACATAGAGGCTGCTGTACAGGACAGATTGAATGAGCAAGAGGGCGTACCTAGTGTTTTCAACCCACCTCCATCACGACCCCTGCAGGTTAATACAGCTGACCACAGGATCTACAGCTATGTTGTCTCAAGACCTCAACCAAGGGGGCTGCTTGGATGGGGTTATTACTTGATAATGCTTCCATTCCGGTTTACCTATTACACGATACTTGATATATTT

CircID	chr5:176479188\|176489027
ORF Type	ORF2
Protein Length	47
Nucleotide Length	141
Protein Sequence	MSKRAYLVFSTHLHHDPCRLIQLTTGSTAMLSQDLNQGGCLDGVIT*
Nucleotide Sequence	ATGAGCAAGAGGGCGTACCTAGTGTTTTCAACCCACCTCCATCACGACCCCTGCAGGTTAATACAGCTGACCACAGGATCTACAGCTATGTTGTCTCAAGACCTCAACCAAGGGGGCTGCTTGGATGGGGTTATTACTTGA

CircID	chr5:176479188\|176489027
ORF Type	ORF3
Protein Length	32
Nucleotide Length	96
Protein Sequence	MEALSSNNPIQAAPLVEVLRQHSCRSCGQLY*
Nucleotide Sequence	ATGGAAGCATTATCAAGTAATAACCCCATCCAAGCAGCCCCCTTGGTTGAGGTCTTGAGACAACATAGCTGTAGATCCTGTGGTCAGCTGTATTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:176479188\|176489027	NOP56	3	2	0
chr5:176479188\|176489027	ELAVL1	2	4	1
chr5:176479188\|176489027	SF3B4	1	0	2
chr5:176479188\|176489027	PRPF8	0	4	1
chr5:176479188\|176489027	UPF1	1	0	0
chr5:176479188\|176489027	TAF15	1	1	0
chr5:176479188\|176489027	FMR1	0	0	1
chr5:176479188\|176489027	CPSF6	2	3	0
chr5:176479188\|176489027	CPSF1	0	1	0
chr5:176479188\|176489027	ZC3H7B	0	1	0
chr5:176479188\|176489027	DGCR8	0	1	0
chr5:176479188\|176489027	CPSF7	2	1	0
chr5:176479188\|176489027	SRSF1	1	0	2
chr5:176479188\|176489027	NOP58	0	4	0
chr5:176479188\|176489027	SRSF3	0	1	0
chr5:176479188\|176489027	U2AF1	1	0	2
chr5:176479188\|176489027	U2AF2	7	7	7
chr5:176479188\|176489027	SRSF9	1	0	1
chr5:176479188\|176489027	TIAL1	0	1	0
chr5:176479188\|176489027	DDX54	1	0	5
chr5:176479188\|176489027	RBM10	1	2	0
chr5:176479188\|176489027	PCBP2	0	1	0
chr5:176479188\|176489027	SF3A3	1	0	0
chr5:176479188\|176489027	HNRNPL	0	1	0
chr5:176479188\|176489027	PTBP1	2	3	0
chr5:176479188\|176489027	HNRNPC	8	7	1
chr5:176479188\|176489027	DHX9	1	2	1
chr5:176479188\|176489027	HNRNPA1	1	3	0
chr5:176479188\|176489027	DDX3X	0	0	1
chr5:176479188\|176489027	WDR33	0	3	0
chr5:176479188\|176489027	SMNDC1	0	0	1
chr5:176479188\|176489027	ACIN1	0	0	1
chr5:176479188\|176489027	LIN28B	0	0	1
chr5:176479188\|176489027	FIP1L1	0	2	0
chr5:176479188\|176489027	IGF2BP1	0	0	1
chr5:176479188\|176489027	IGF2BP3	0	0	2
chr5:176479188\|176489027	IGF2BP2	2	4	5
chr5:176479188\|176489027	TARDBP	2	0	0
chr5:176479188\|176489027	BUD13	0	0	1
chr5:176479188\|176489027	KHSRP	0	4	0
chr5:176479188\|176489027	CSTF2T	0	5	1
chr5:176479188\|176489027	CSTF2	0	3	0
chr5:176479188\|176489027	XRN2	0	0	1
chr5:176479188\|176489027	HNRNPK	0	3	0
chr5:176479188\|176489027	FBL	3	0	2
chr5:176479188\|176489027	ATXN2	1	0	0
chr5:176479188\|176489027	EWSR1	0	1	0
chr5:176479188\|176489027	EIF4A3	1	1	8
chr5:176479188\|176489027	AGO2	0	0	4

CircRNA Information