CircRNA Information

General Information
circRNA Basic Information
CircID chr5:176657124|176657307
Strand +
CircType exon
Host Gene ENSG00000048140.16;
Algorism CIRI2;
Sequence CCTCCACACAGCACCTCCCACCCCACTTGGCCTGCACCCTCTGAGCTGCGCCCTTCCTAGTCCCCTGGAGAGTCCACCACCCCAAATGTAGCCGAGACGGTGGCTCCCTGTGCACACGTGTGCCTGCATGTGTGTGTACACACGCATATGGGACAAGAGGCCCAGGCGGAGGCACAGCAACTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:176657124|176657307 hsa-miR-221-5p 0 0 1
chr5:176657124|176657307 hsa-miR-221-3p 0 0 1
chr5:176657124|176657307 hsa-miR-222-5p 0 0 1
chr5:176657124|176657307 hsa-miR-222-3p 0 0 1
chr5:176657124|176657307 hsa-miR-603 0 0 1
chr5:176657124|176657307 hsa-miR-608 1 0 1
chr5:176657124|176657307 hsa-miR-661 1 0 1
chr5:176657124|176657307 hsa-miR-766-5p 0 0 1
chr5:176657124|176657307 hsa-miR-766-3p 0 0 1
chr5:176657124|176657307 hsa-miR-1293 1 0 1
chr5:176657124|176657307 hsa-miR-1307-5p 0 0 1
chr5:176657124|176657307 hsa-miR-1307-3p 0 0 1
chr5:176657124|176657307 hsa-miR-342-5p 1 0 1
chr5:176657124|176657307 hsa-miR-362-3p 0 0 1
chr5:176657124|176657307 hsa-miR-550 0 0 1
chr5:176657124|176657307 hsa-miR-220c 0 0 1
chr5:176657124|176657307 hsa-miR-644 0 0 1
chr5:176657124|176657307 hsa-miR-329 0 0 1
chr5:176657124|176657307 hsa-miR-147 0 0 1
chr5:176657124|176657307 hsa-miR-612 1 0 0
chr5:176657124|176657307 hsa-miR-637 1 0 0
chr5:176657124|176657307 hsa-miR-663a 1 0 0
chr5:176657124|176657307 hsa-miR-762 1 0 0
chr5:176657124|176657307 hsa-miR-933 1 0 0
chr5:176657124|176657307 hsa-miR-3197 1 0 0
chr5:176657124|176657307 hsa-miR-3937 1 0 0
chr5:176657124|176657307 hsa-miR-4450 1 0 0
chr5:176657124|176657307 hsa-miR-4466 1 0 0
chr5:176657124|176657307 hsa-miR-4483 1 0 0
chr5:176657124|176657307 hsa-miR-4489 1 0 0
chr5:176657124|176657307 hsa-miR-4492 1 0 0
chr5:176657124|176657307 hsa-miR-4507 1 0 0
chr5:176657124|176657307 hsa-miR-1587 1 0 0
chr5:176657124|176657307 hsa-miR-4651 1 0 0
chr5:176657124|176657307 hsa-miR-4674 1 0 0
chr5:176657124|176657307 hsa-miR-4739 1 0 0
chr5:176657124|176657307 hsa-miR-4741 1 0 0
chr5:176657124|176657307 hsa-miR-5572 1 0 0
chr5:176657124|176657307 hsa-miR-6745 1 0 0
chr5:176657124|176657307 hsa-miR-6860 1 0 0
chr5:176657124|176657307 hsa-miR-7704 1 0 0
chr5:176657124|176657307 hsa-miR-8052 1 0 0
chr5:176657124|176657307 hsa-miR-8089 1 0 0
chr5:176657124|176657307 hsa-miR-4433b-3p 1 0 0
chr5:176657124|176657307 hsa-miR-92a-1-5p 1 0 0
chr5:176657124|176657307 hsa-miR-92a-2-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6747-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6861-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6857-5p 1 0 0
chr5:176657124|176657307 hsa-miR-125a-3p 1 0 0
chr5:176657124|176657307 hsa-miR-6728-5p 1 0 0
chr5:176657124|176657307 hsa-miR-8071 1 0 0
chr5:176657124|176657307 hsa-miR-6880-5p 1 0 0
chr5:176657124|176657307 hsa-miR-7847-3p 1 0 0
chr5:176657124|176657307 hsa-miR-6742-5p 1 0 0
chr5:176657124|176657307 hsa-miR-3151-5p 1 0 0
chr5:176657124|176657307 hsa-miR-3180-3p 1 0 0
chr5:176657124|176657307 hsa-miR-6772-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6796-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6732-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6805-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6798-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6782-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6786-5p 1 0 0
chr5:176657124|176657307 hsa-miR-939-3p 1 0 0
chr5:176657124|176657307 hsa-miR-1229-5p 1 0 0
chr5:176657124|176657307 hsa-miR-4640-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6771-5p 1 0 0
chr5:176657124|176657307 hsa-miR-92b-5p 1 0 0
chr5:176657124|176657307 hsa-miR-149-3p 1 0 0
chr5:176657124|176657307 hsa-miR-6824-5p 1 0 0
chr5:176657124|176657307 hsa-miR-3162-5p 1 0 0
chr5:176657124|176657307 hsa-miR-3191-3p 1 0 0
chr5:176657124|176657307 hsa-miR-4638-5p 1 0 0
chr5:176657124|176657307 hsa-miR-4632-3p 1 0 0
chr5:176657124|176657307 hsa-miR-6503-3p 1 0 0
chr5:176657124|176657307 hsa-miR-6769b-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6787-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6812-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6816-5p 1 0 0
chr5:176657124|176657307 hsa-miR-1343-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6726-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6737-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6752-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6754-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6756-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6769a-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6803-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6819-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6842-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6851-5p 1 0 0
chr5:176657124|176657307 hsa-miR-10401-5p 1 0 0
chr5:176657124|176657307 hsa-miR-1249-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6779-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6780a-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6879-5p 1 0 0
chr5:176657124|176657307 hsa-miR-3620-5p 1 0 0
chr5:176657124|176657307 hsa-miR-4728-5p 1 0 0
chr5:176657124|176657307 hsa-miR-5196-5p 1 0 0
chr5:176657124|176657307 hsa-miR-10396b-5p 1 0 0
chr5:176657124|176657307 hsa-miR-328-5p 1 0 0
chr5:176657124|176657307 hsa-miR-4649-5p 1 0 0
chr5:176657124|176657307 hsa-miR-4685-5p 1 0 0
chr5:176657124|176657307 hsa-miR-4725-3p 1 0 0
chr5:176657124|176657307 hsa-miR-4745-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6729-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6777-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6794-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6795-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6846-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6848-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6883-5p 1 0 0
chr5:176657124|176657307 hsa-miR-3187-5p 1 0 0
chr5:176657124|176657307 hsa-miR-939-5p 1 0 0
chr5:176657124|176657307 hsa-miR-365a-5p 1 0 0
chr5:176657124|176657307 hsa-miR-365b-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6511b-5p 1 0 0
chr5:176657124|176657307 hsa-miR-3940-5p 1 0 0
chr5:176657124|176657307 hsa-miR-5008-3p 1 0 0
chr5:176657124|176657307 hsa-miR-6855-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6877-3p 1 0 0
chr5:176657124|176657307 hsa-miR-4646-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6891-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6766-5p 1 0 0
chr5:176657124|176657307 hsa-miR-6785-5p 1 0 0
chr5:176657124|176657307 hsa-miR-769-3p 1 0 0
chr5:176657124|176657307 hsa-miR-10400-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr5:176657124|176657307
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MCTRVPACVCTHAYGTRGPGGGTAT
Nucleotide Sequence CTGTGCACACGTGTGCCTGCATGTGTGTGTACACACGCATATGGGACAAGAGGCCCAGGCGGAGGCACAGCAACT
CircID chr5:176657124|176657307
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MGWWTLQGTRKGAAQRVQAKWGGRCCVE
Nucleotide Sequence TTGGGGTGGTGGACTCTCCAGGGGACTAGGAAGGGCGCAGCTCAGAGGGTGCAGGCCAAGTGGGGTGGGAGGTGCTGTGTGGAG
CircID chr5:176657124|176657307
ORF Type ORF3
Protein Length 60
Nucleotide Length 180
Protein Sequence MLCLRLGLLSHMRVYTHMQAHVCTGSHRLGYIWGGGLSRGLGRAQLRGCRPSGVGGAVWR
Nucleotide Sequence TTGCTGTGCCTCCGCCTGGGCCTCTTGTCCCATATGCGTGTGTACACACACATGCAGGCACACGTGTGCACAGGGAGCCACCGTCTCGGCTACATTTGGGGTGGTGGACTCTCCAGGGGACTAGGAAGGGCGCAGCTCAGAGGGTGCAGGCCAAGTGGGGTGGGAGGTGCTGTGTGGAGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab