CircRNA Information

General Information
circRNA Basic Information
CircID chr5:177331722|177331848
Strand -
CircType exon
Host Gene ENSG00000169223.13;
Algorism CIRI2;
Sequence ACACCACAAAACAAAATCACTTCCCCACGTCCTCAGGAGCCCACCCCAGTGTGGTCCGGGGGACCCTCCAGTGTTCAACAGCTGCCTGCAGGGGCCACAGCCCATCTGTAGACACAGACCCCTGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:177331722|177331848 hsa-miR-141-5p 0 0 1
chr5:177331722|177331848 hsa-miR-141-3p 0 0 1
chr5:177331722|177331848 hsa-miR-200a-5p 0 0 1
chr5:177331722|177331848 hsa-miR-200a-3p 0 0 1
chr5:177331722|177331848 hsa-miR-608 1 1 1
chr5:177331722|177331848 hsa-miR-653-5p 0 0 1
chr5:177331722|177331848 hsa-miR-653-3p 0 0 1
chr5:177331722|177331848 hsa-miR-541-5p 0 0 1
chr5:177331722|177331848 hsa-miR-541-3p 0 0 1
chr5:177331722|177331848 hsa-miR-934 0 0 1
chr5:177331722|177331848 hsa-miR-1200 0 0 1
chr5:177331722|177331848 hsa-miR-663b 0 0 1
chr5:177331722|177331848 hsa-miR-1205 0 0 1
chr5:177331722|177331848 hsa-miR-1267 0 0 1
chr5:177331722|177331848 hsa-miR-139-5p 0 0 1
chr5:177331722|177331848 hsa-miR-491-5p 0 0 1
chr5:177331722|177331848 hsa-miR-1224-5p 1 1 1
chr5:177331722|177331848 hsa-miR-654-5p 0 1 1
chr5:177331722|177331848 hsa-miR-342-5p 0 0 1
chr5:177331722|177331848 hsa-miR-623 1 1 0
chr5:177331722|177331848 hsa-miR-637 1 0 0
chr5:177331722|177331848 hsa-miR-650 1 0 0
chr5:177331722|177331848 hsa-miR-760 1 0 0
chr5:177331722|177331848 hsa-miR-940 1 0 0
chr5:177331722|177331848 hsa-miR-1265 1 1 0
chr5:177331722|177331848 hsa-miR-1268a 1 0 0
chr5:177331722|177331848 hsa-miR-544b 0 1 0
chr5:177331722|177331848 hsa-miR-4322 1 0 0
chr5:177331722|177331848 hsa-miR-3714 1 0 0
chr5:177331722|177331848 hsa-miR-3937 1 1 0
chr5:177331722|177331848 hsa-miR-1268b 1 0 0
chr5:177331722|177331848 hsa-miR-4463 1 0 0
chr5:177331722|177331848 hsa-miR-3689c 1 0 0
chr5:177331722|177331848 hsa-miR-2392 1 0 0
chr5:177331722|177331848 hsa-miR-4507 1 0 0
chr5:177331722|177331848 hsa-miR-1587 1 0 0
chr5:177331722|177331848 hsa-miR-4651 1 1 0
chr5:177331722|177331848 hsa-miR-4673 1 0 0
chr5:177331722|177331848 hsa-miR-4674 1 1 0
chr5:177331722|177331848 hsa-miR-4675 0 1 0
chr5:177331722|177331848 hsa-miR-4692 0 1 0
chr5:177331722|177331848 hsa-miR-4706 1 0 0
chr5:177331722|177331848 hsa-miR-4721 1 0 0
chr5:177331722|177331848 hsa-miR-4734 1 0 0
chr5:177331722|177331848 hsa-miR-5698 1 0 0
chr5:177331722|177331848 hsa-miR-5787 1 0 0
chr5:177331722|177331848 hsa-miR-6127 1 0 0
chr5:177331722|177331848 hsa-miR-6863 1 1 0
chr5:177331722|177331848 hsa-miR-7704 1 0 0
chr5:177331722|177331848 hsa-miR-7974 0 1 0
chr5:177331722|177331848 hsa-miR-8089 1 0 0
chr5:177331722|177331848 hsa-miR-6825-5p 1 0 0
chr5:177331722|177331848 hsa-miR-210-5p 1 0 0
chr5:177331722|177331848 hsa-miR-6515-5p 0 1 0
chr5:177331722|177331848 hsa-miR-1301-3p 1 0 0
chr5:177331722|177331848 hsa-miR-6806-5p 1 0 0
chr5:177331722|177331848 hsa-miR-7108-5p 1 1 0
chr5:177331722|177331848 hsa-miR-6742-5p 1 0 0
chr5:177331722|177331848 hsa-miR-6793-5p 1 0 0
chr5:177331722|177331848 hsa-miR-6829-5p 1 0 0
chr5:177331722|177331848 hsa-miR-23a-5p 1 1 0
chr5:177331722|177331848 hsa-miR-6798-5p 1 0 0
chr5:177331722|177331848 hsa-miR-6782-5p 1 0 0
chr5:177331722|177331848 hsa-miR-6735-3p 1 0 0
chr5:177331722|177331848 hsa-miR-6852-5p 1 0 0
chr5:177331722|177331848 hsa-miR-1226-5p 1 0 0
chr5:177331722|177331848 hsa-miR-6847-5p 1 0 0
chr5:177331722|177331848 hsa-miR-10400-5p 1 0 0
chr5:177331722|177331848 hsa-miR-3689b-3p 1 0 0
chr5:177331722|177331848 hsa-miR-4763-3p 1 0 0
chr5:177331722|177331848 hsa-miR-6769b-5p 1 0 0
chr5:177331722|177331848 hsa-miR-6812-5p 1 1 0
chr5:177331722|177331848 hsa-miR-6726-5p 1 0 0
chr5:177331722|177331848 hsa-miR-6737-5p 1 1 0
chr5:177331722|177331848 hsa-miR-6756-5p 1 1 0
chr5:177331722|177331848 hsa-miR-6803-5p 1 0 0
chr5:177331722|177331848 hsa-miR-6819-5p 1 1 0
chr5:177331722|177331848 hsa-miR-6722-3p 1 1 0
chr5:177331722|177331848 hsa-miR-6808-5p 1 0 0
chr5:177331722|177331848 hsa-miR-3620-5p 1 0 0
chr5:177331722|177331848 hsa-miR-6836-5p 1 0 0
chr5:177331722|177331848 hsa-miR-1909-3p 0 1 0
chr5:177331722|177331848 hsa-miR-3689a-3p 1 0 0
chr5:177331722|177331848 hsa-miR-4632-5p 1 0 0
chr5:177331722|177331848 hsa-miR-4649-5p 1 0 0
chr5:177331722|177331848 hsa-miR-6777-5p 1 0 0
chr5:177331722|177331848 hsa-miR-6848-5p 1 0 0
chr5:177331722|177331848 hsa-miR-939-5p 1 0 0
chr5:177331722|177331848 hsa-miR-6511b-5p 1 1 0
chr5:177331722|177331848 hsa-miR-4700-5p 1 0 0
chr5:177331722|177331848 hsa-miR-3679-5p 1 0 0
chr5:177331722|177331848 hsa-miR-4472 1 0 0
chr5:177331722|177331848 hsa-miR-6791-5p 1 0 0
chr5:177331722|177331848 hsa-miR-6753-3p 0 1 0
chr5:177331722|177331848 hsa-miR-9851-5p 1 0 0
chr5:177331722|177331848 hsa-miR-10400-3p 1 1 0
chr5:177331722|177331848 hsa-miR-10394-5p 0 1 0
chr5:177331722|177331848 hsa-miR-6811-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr5:177331722|177331848
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MWPLQAAVEHWRVPRTTLGWAPEDVGK
Nucleotide Sequence CTGTGGCCCCTGCAGGCAGCTGTTGAACACTGGAGGGTCCCCCGGACCACACTGGGGTGGGCTCCTGAGGACGTGGGGAAGTGA
CircID chr5:177331722|177331848
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MCLQMGCGPCRQLLNTGGSPGPHWGGLLRTWGSDFVLWC
Nucleotide Sequence CTGTGTCTACAGATGGGCTGTGGCCCCTGCAGGCAGCTGTTGAACACTGGAGGGTCCCCCGGACCACACTGGGGTGGGCTCCTGAGGACGTGGGGAAGTGATTTTGTTTTGTGGTGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab