CircRNA Information

General Information
circRNA Basic Information
CircID chr5:177331786|177331932
Strand -
CircType exon
Host Gene ENSG00000169223.13;
Algorism CIRI2;
Sequence CCTCCAGTGTTCAACAGCTGCCTGCAGGGGCCACAGCCCATCTGTAGACACAGACCCCTGCTCCTGAGACACCAGCCCCAGGAGAGCCTCCGTCTCCAGCTGTGGGGGGTGCCAGACCCTAAGCCTCGGCTCTGCCACCTGTCCCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:177331786|177331932 hsa-miR-141-5p 0 0 1
chr5:177331786|177331932 hsa-miR-141-3p 0 0 1
chr5:177331786|177331932 hsa-miR-200a-5p 0 0 1
chr5:177331786|177331932 hsa-miR-200a-3p 0 0 1
chr5:177331786|177331932 hsa-miR-552-5p 0 0 1
chr5:177331786|177331932 hsa-miR-552-3p 0 0 1
chr5:177331786|177331932 hsa-miR-653-5p 0 0 1
chr5:177331786|177331932 hsa-miR-653-3p 0 0 1
chr5:177331786|177331932 hsa-miR-934 0 0 1
chr5:177331786|177331932 hsa-miR-1182 0 0 1
chr5:177331786|177331932 hsa-miR-663b 0 0 1
chr5:177331786|177331932 hsa-miR-1205 0 0 1
chr5:177331786|177331932 hsa-miR-1266-5p 0 0 1
chr5:177331786|177331932 hsa-miR-1266-3p 0 0 1
chr5:177331786|177331932 hsa-miR-1267 0 0 1
chr5:177331786|177331932 hsa-miR-139-5p 0 0 1
chr5:177331786|177331932 hsa-miR-1207-3p 0 0 1
chr5:177331786|177331932 hsa-miR-138 0 0 1
chr5:177331786|177331932 hsa-miR-608 1 0 0
chr5:177331786|177331932 hsa-miR-623 1 1 0
chr5:177331786|177331932 hsa-miR-762 1 1 0
chr5:177331786|177331932 hsa-miR-940 1 0 0
chr5:177331786|177331932 hsa-miR-3188 0 1 0
chr5:177331786|177331932 hsa-miR-4298 1 1 0
chr5:177331786|177331932 hsa-miR-3918 1 0 0
chr5:177331786|177331932 hsa-miR-3937 1 1 0
chr5:177331786|177331932 hsa-miR-4451 0 1 0
chr5:177331786|177331932 hsa-miR-4489 1 0 0
chr5:177331786|177331932 hsa-miR-4498 1 0 0
chr5:177331786|177331932 hsa-miR-4507 1 0 0
chr5:177331786|177331932 hsa-miR-1587 1 0 0
chr5:177331786|177331932 hsa-miR-4537 0 1 0
chr5:177331786|177331932 hsa-miR-3960 1 0 0
chr5:177331786|177331932 hsa-miR-4651 1 0 0
chr5:177331786|177331932 hsa-miR-4656 1 0 0
chr5:177331786|177331932 hsa-miR-4675 1 1 0
chr5:177331786|177331932 hsa-miR-4692 0 1 0
chr5:177331786|177331932 hsa-miR-4706 1 0 0
chr5:177331786|177331932 hsa-miR-4741 1 0 0
chr5:177331786|177331932 hsa-miR-6081 1 0 0
chr5:177331786|177331932 hsa-miR-6085 1 0 0
chr5:177331786|177331932 hsa-miR-7974 0 1 0
chr5:177331786|177331932 hsa-miR-8089 1 1 0
chr5:177331786|177331932 hsa-miR-138-5p 0 1 0
chr5:177331786|177331932 hsa-miR-211-3p 0 1 0
chr5:177331786|177331932 hsa-miR-4433a-3p 1 1 0
chr5:177331786|177331932 hsa-miR-6765-5p 1 0 0
chr5:177331786|177331932 hsa-miR-4687-3p 1 0 0
chr5:177331786|177331932 hsa-miR-6799-5p 1 0 0
chr5:177331786|177331932 hsa-miR-139-3p 0 1 0
chr5:177331786|177331932 hsa-miR-6820-5p 1 0 0
chr5:177331786|177331932 hsa-miR-6721-5p 1 0 0
chr5:177331786|177331932 hsa-miR-7845-5p 1 1 0
chr5:177331786|177331932 hsa-miR-7108-5p 1 1 0
chr5:177331786|177331932 hsa-miR-185-3p 1 1 0
chr5:177331786|177331932 hsa-miR-6829-5p 1 0 0
chr5:177331786|177331932 hsa-miR-2467-5p 0 1 0
chr5:177331786|177331932 hsa-miR-3126-5p 0 1 0
chr5:177331786|177331932 hsa-miR-1343-3p 0 1 0
chr5:177331786|177331932 hsa-miR-6784-5p 0 1 0
chr5:177331786|177331932 hsa-miR-296-3p 1 0 0
chr5:177331786|177331932 hsa-miR-4446-3p 1 0 0
chr5:177331786|177331932 hsa-miR-7112-5p 1 0 0
chr5:177331786|177331932 hsa-miR-597-3p 0 1 0
chr5:177331786|177331932 hsa-miR-6770-3p 1 0 0
chr5:177331786|177331932 hsa-miR-3126-3p 0 1 0
chr5:177331786|177331932 hsa-miR-3664-3p 0 1 0
chr5:177331786|177331932 hsa-miR-10400-5p 1 0 0
chr5:177331786|177331932 hsa-miR-4763-3p 1 1 0
chr5:177331786|177331932 hsa-miR-6816-5p 1 0 0
chr5:177331786|177331932 hsa-miR-6865-5p 1 1 0
chr5:177331786|177331932 hsa-miR-6893-5p 1 0 0
chr5:177331786|177331932 hsa-miR-5001-5p 1 1 0
chr5:177331786|177331932 hsa-miR-6726-5p 1 0 0
chr5:177331786|177331932 hsa-miR-6743-5p 1 0 0
chr5:177331786|177331932 hsa-miR-6803-5p 1 0 0
chr5:177331786|177331932 hsa-miR-6813-5p 1 1 0
chr5:177331786|177331932 hsa-miR-6842-5p 1 0 0
chr5:177331786|177331932 hsa-miR-6722-3p 1 1 0
chr5:177331786|177331932 hsa-miR-3620-5p 1 0 0
chr5:177331786|177331932 hsa-miR-6836-5p 1 0 0
chr5:177331786|177331932 hsa-miR-1237-5p 1 0 0
chr5:177331786|177331932 hsa-miR-1909-3p 0 1 0
chr5:177331786|177331932 hsa-miR-328-5p 1 0 0
chr5:177331786|177331932 hsa-miR-4632-5p 1 0 0
chr5:177331786|177331932 hsa-miR-6846-5p 1 0 0
chr5:177331786|177331932 hsa-miR-6848-5p 1 0 0
chr5:177331786|177331932 hsa-miR-939-5p 1 0 0
chr5:177331786|177331932 hsa-miR-6511b-5p 1 1 0
chr5:177331786|177331932 hsa-miR-3940-5p 1 0 0
chr5:177331786|177331932 hsa-miR-6791-5p 1 0 0
chr5:177331786|177331932 hsa-miR-6753-3p 0 1 0
chr5:177331786|177331932 hsa-miR-9851-5p 1 0 0
chr5:177331786|177331932 hsa-miR-10394-5p 1 1 0
chr5:177331786|177331932 hsa-miR-6811-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr5:177331786|177331932
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MQGPQPICRHRPLLLRHQPQESLRLQLWGVPDPKPRLCHLSL
Nucleotide Sequence CTGCAGGGGCCACAGCCCATCTGTAGACACAGACCCCTGCTCCTGAGACACCAGCCCCAGGAGAGCCTCCGTCTCCAGCTGTGGGGGGTGCCAGACCCTAAGCCTCGGCTCTGCCACCTGTCCCTG
CircID chr5:177331786|177331932
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence METEALLGLVSQEQGSVSTDGLWPLQAAVEHWR
Nucleotide Sequence CTGGAGACGGAGGCTCTCCTGGGGCTGGTGTCTCAGGAGCAGGGGTCTGTGTCTACAGATGGGCTGTGGCCCCTGCAGGCAGCTGTTGAACACTGGAGG
CircID chr5:177331786|177331932
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MAPPTAGDGGSPGAGVSGAGVCVYRWAVAPAGSC
Nucleotide Sequence CTGGCACCCCCCACAGCTGGAGACGGAGGCTCTCCTGGGGCTGGTGTCTCAGGAGCAGGGGTCTGTGTCTACAGATGGGCTGTGGCCCCTGCAGGCAGCTGTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab