CircRNA Information

General Information
circRNA Basic Information
CircID chr5:177521660|177521769
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGTAGGCCTCTGTTCTATTACTCCTCCCTGGGCCCTGCTGCCCATGCTCCTGAAGGTCCCCTTCCTGGACTGGCATCTCCTAAGGCATAACCATCAGGGTCTTAACCAG
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:177521660|177521769 hsa-miR-208a-5p 0 0 1
chr5:177521660|177521769 hsa-miR-208a-3p 0 0 1
chr5:177521660|177521769 hsa-miR-214-5p 0 0 1
chr5:177521660|177521769 hsa-miR-214-3p 0 0 1
chr5:177521660|177521769 hsa-miR-504-5p 0 0 1
chr5:177521660|177521769 hsa-miR-504-3p 0 0 1
chr5:177521660|177521769 hsa-miR-765 0 0 1
chr5:177521660|177521769 hsa-miR-665 0 0 1
chr5:177521660|177521769 hsa-miR-208b-5p 0 0 1
chr5:177521660|177521769 hsa-miR-208b-3p 0 0 1
chr5:177521660|177521769 hsa-miR-1321 0 0 1
chr5:177521660|177521769 hsa-miR-532-5p 0 1 1
chr5:177521660|177521769 hsa-miR-455-3p 0 0 1
chr5:177521660|177521769 hsa-miR-499-5p 0 0 1
chr5:177521660|177521769 hsa-miR-711 1 0 0
chr5:177521660|177521769 hsa-miR-3138 1 0 0
chr5:177521660|177521769 hsa-miR-3154 1 1 0
chr5:177521660|177521769 hsa-miR-3196 1 0 0
chr5:177521660|177521769 hsa-miR-4270 1 0 0
chr5:177521660|177521769 hsa-miR-4281 1 0 0
chr5:177521660|177521769 hsa-miR-3918 1 1 0
chr5:177521660|177521769 hsa-miR-3945 1 0 0
chr5:177521660|177521769 hsa-miR-4437 1 0 0
chr5:177521660|177521769 hsa-miR-4441 1 1 0
chr5:177521660|177521769 hsa-miR-4476 0 1 0
chr5:177521660|177521769 hsa-miR-4518 0 1 0
chr5:177521660|177521769 hsa-miR-4656 1 0 0
chr5:177521660|177521769 hsa-miR-4688 1 0 0
chr5:177521660|177521769 hsa-miR-4706 1 0 0
chr5:177521660|177521769 hsa-miR-4739 1 1 0
chr5:177521660|177521769 hsa-miR-4784 1 0 0
chr5:177521660|177521769 hsa-miR-5698 1 0 0
chr5:177521660|177521769 hsa-miR-6132 1 1 0
chr5:177521660|177521769 hsa-miR-6133 1 0 0
chr5:177521660|177521769 hsa-miR-6861-5p 1 0 0
chr5:177521660|177521769 hsa-miR-7106-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6825-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6894-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6799-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6510-5p 1 1 0
chr5:177521660|177521769 hsa-miR-766-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6089 1 0 0
chr5:177521660|177521769 hsa-miR-3192-5p 1 0 0
chr5:177521660|177521769 hsa-miR-7847-3p 1 0 0
chr5:177521660|177521769 hsa-miR-4722-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6721-5p 1 0 0
chr5:177521660|177521769 hsa-miR-4655-5p 1 0 0
chr5:177521660|177521769 hsa-miR-8069 1 0 0
chr5:177521660|177521769 hsa-miR-503-5p 1 0 0
chr5:177521660|177521769 hsa-miR-3180-3p 1 0 0
chr5:177521660|177521769 hsa-miR-6798-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6881-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6888-5p 0 1 0
chr5:177521660|177521769 hsa-miR-5006-5p 1 0 0
chr5:177521660|177521769 hsa-miR-5088-5p 1 1 0
chr5:177521660|177521769 hsa-miR-7109-5p 1 0 0
chr5:177521660|177521769 hsa-miR-1229-5p 1 0 0
chr5:177521660|177521769 hsa-miR-4640-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6753-5p 1 0 0
chr5:177521660|177521769 hsa-miR-885-3p 1 1 0
chr5:177521660|177521769 hsa-miR-6771-5p 1 0 0
chr5:177521660|177521769 hsa-miR-149-3p 1 0 0
chr5:177521660|177521769 hsa-miR-6824-5p 1 1 0
chr5:177521660|177521769 hsa-miR-6895-5p 1 0 0
chr5:177521660|177521769 hsa-miR-7160-3p 1 0 0
chr5:177521660|177521769 hsa-miR-744-5p 1 0 0
chr5:177521660|177521769 hsa-miR-3152-3p 1 0 0
chr5:177521660|177521769 hsa-miR-1207-5p 1 0 0
chr5:177521660|177521769 hsa-miR-4763-3p 1 0 0
chr5:177521660|177521769 hsa-miR-6870-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6775-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6743-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6752-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6754-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6756-5p 1 0 0
chr5:177521660|177521769 hsa-miR-7110-5p 1 0 0
chr5:177521660|177521769 hsa-miR-11181-3p 1 0 0
chr5:177521660|177521769 hsa-miR-1249-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6722-3p 1 0 0
chr5:177521660|177521769 hsa-miR-6774-5p 1 0 0
chr5:177521660|177521769 hsa-miR-7111-5p 1 0 0
chr5:177521660|177521769 hsa-miR-4728-5p 1 0 0
chr5:177521660|177521769 hsa-miR-5196-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6836-5p 1 1 0
chr5:177521660|177521769 hsa-miR-10396a-5p 1 0 0
chr5:177521660|177521769 hsa-miR-1909-3p 1 0 0
chr5:177521660|177521769 hsa-miR-328-5p 1 0 0
chr5:177521660|177521769 hsa-miR-4632-5p 1 0 0
chr5:177521660|177521769 hsa-miR-4685-5p 1 1 0
chr5:177521660|177521769 hsa-miR-6735-5p 0 1 0
chr5:177521660|177521769 hsa-miR-6738-5p 1 1 0
chr5:177521660|177521769 hsa-miR-6777-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6795-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6883-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6887-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6889-5p 1 0 0
chr5:177521660|177521769 hsa-miR-3187-5p 1 0 0
chr5:177521660|177521769 hsa-miR-1266-5p 1 0 0
chr5:177521660|177521769 hsa-miR-365a-5p 0 1 0
chr5:177521660|177521769 hsa-miR-365b-5p 1 1 0
chr5:177521660|177521769 hsa-miR-3085-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6856-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6773-5p 1 0 0
chr5:177521660|177521769 hsa-miR-3173-3p 1 0 0
chr5:177521660|177521769 hsa-miR-6876-5p 0 1 0
chr5:177521660|177521769 hsa-miR-6785-5p 1 0 0
chr5:177521660|177521769 hsa-miR-6837-5p 1 0 0
chr5:177521660|177521769 hsa-miR-3619-5p 0 1 0
chr5:177521660|177521769 hsa-miR-6764-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr5:177521660|177521769
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MFYYSSLGPAAHAPEGPLPGLASPKA
Nucleotide Sequence CTGTTCTATTACTCCTCCCTGGGCCCTGCTGCCCATGCTCCTGAAGGTCCCCTTCCTGGACTGGCATCTCCTAAGGCATAA
CircID chr5:177521660|177521769
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MLPMLLKVPFLDWHLLRHNHQGLNQ
Nucleotide Sequence CTGCTGCCCATGCTCCTGAAGGTCCCCTTCCTGGACTGGCATCTCCTAAGGCATAACCATCAGGGTCTTAACCAG
CircID chr5:177521660|177521769
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MPVQEGDLQEHGQQGPGRSNRTEAY
Nucleotide Sequence ATGCCAGTCCAGGAAGGGGACCTTCAGGAGCATGGGCAGCAGGGCCCAGGGAGGAGTAATAGAACAGAGGCCTAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab