CircRNA Information

General Information
circRNA Basic Information
CircID chr5:177536451|177536658
Strand -
CircType exon
Host Gene ENSG00000146067.14;
Algorism CIRI2;
Sequence CCCGAGAATGGTGGGGGCATCTTCAGGAGCGGCATGCTGGTGGAGGGTAGATGGGAGCTCTGACATGGCCCTGGAGTGTGGGGGGCAGTGGCAGCAGCAACAGGGCACTCTGAAGCCTGGGCAGGGAAAGGTGCTGCCGGGGTGGTGGGCAGCAGGTGTGGGTGGGGTGGGGAGCCAAAGGAGCTGGGGTGAGACGGGATTAGAGATG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:177536451|177536658 hsa-miR-370-5p 0 0 1
chr5:177536451|177536658 hsa-miR-370-3p 0 0 1
chr5:177536451|177536658 hsa-miR-634 0 0 1
chr5:177536451|177536658 hsa-miR-874-5p 0 0 1
chr5:177536451|177536658 hsa-miR-874-3p 0 0 1
chr5:177536451|177536658 hsa-miR-1226-5p 0 0 1
chr5:177536451|177536658 hsa-miR-1226-3p 0 0 1
chr5:177536451|177536658 hsa-miR-1228-5p 0 0 1
chr5:177536451|177536658 hsa-miR-1228-3p 0 0 1
chr5:177536451|177536658 hsa-miR-1229-5p 0 0 1
chr5:177536451|177536658 hsa-miR-1229-3p 0 0 1
chr5:177536451|177536658 hsa-miR-1247-5p 0 0 1
chr5:177536451|177536658 hsa-miR-1247-3p 0 0 1
chr5:177536451|177536658 hsa-miR-146b-3p 0 0 1
chr5:177536451|177536658 hsa-miR-508-5p 0 1 1
chr5:177536451|177536658 hsa-miR-338-3p 0 0 1
chr5:177536451|177536658 hsa-miR-324-3p 1 1 1
chr5:177536451|177536658 hsa-miR-220b 0 0 1
chr5:177536451|177536658 hsa-miR-1274a 0 0 1
chr5:177536451|177536658 hsa-miR-1274b 0 0 1
chr5:177536451|177536658 hsa-miR-346 1 0 0
chr5:177536451|177536658 hsa-miR-554 1 1 0
chr5:177536451|177536658 hsa-miR-1260a 1 0 0
chr5:177536451|177536658 hsa-miR-1470 1 0 0
chr5:177536451|177536658 hsa-miR-1538 1 0 0
chr5:177536451|177536658 hsa-miR-1913 1 1 0
chr5:177536451|177536658 hsa-miR-1260b 1 0 0
chr5:177536451|177536658 hsa-miR-4254 1 1 0
chr5:177536451|177536658 hsa-miR-4286 1 0 0
chr5:177536451|177536658 hsa-miR-6071 1 0 0
chr5:177536451|177536658 hsa-miR-7977 1 0 0
chr5:177536451|177536658 hsa-miR-12116 1 0 0
chr5:177536451|177536658 hsa-miR-197-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6749-3p 1 0 0
chr5:177536451|177536658 hsa-miR-18a-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6836-3p 1 0 0
chr5:177536451|177536658 hsa-miR-149-5p 1 0 0
chr5:177536451|177536658 hsa-miR-6720-5p 1 0 0
chr5:177536451|177536658 hsa-miR-766-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6892-3p 1 0 0
chr5:177536451|177536658 hsa-miR-210-5p 1 0 0
chr5:177536451|177536658 hsa-miR-6854-5p 1 0 0
chr5:177536451|177536658 hsa-miR-3189-5p 1 0 0
chr5:177536451|177536658 hsa-miR-6787-3p 1 0 0
chr5:177536451|177536658 hsa-miR-1915-5p 1 0 0
chr5:177536451|177536658 hsa-miR-6845-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6796-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6728-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6882-3p 1 0 0
chr5:177536451|177536658 hsa-miR-532-3p 1 1 0
chr5:177536451|177536658 hsa-miR-6772-3p 1 1 0
chr5:177536451|177536658 hsa-miR-4763-5p 1 0 0
chr5:177536451|177536658 hsa-miR-6763-3p 1 0 0
chr5:177536451|177536658 hsa-miR-7108-3p 1 0 0
chr5:177536451|177536658 hsa-miR-1909-5p 1 1 0
chr5:177536451|177536658 hsa-miR-4707-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6803-3p 1 0 0
chr5:177536451|177536658 hsa-miR-7113-3p 1 0 0
chr5:177536451|177536658 hsa-miR-7111-3p 1 0 0
chr5:177536451|177536658 hsa-miR-4667-3p 1 0 0
chr5:177536451|177536658 hsa-miR-4446-5p 0 1 0
chr5:177536451|177536658 hsa-miR-6736-3p 1 1 0
chr5:177536451|177536658 hsa-miR-1306-5p 1 0 0
chr5:177536451|177536658 hsa-miR-6769a-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6895-5p 0 1 0
chr5:177536451|177536658 hsa-miR-6870-3p 0 1 0
chr5:177536451|177536658 hsa-miR-4707-5p 1 0 0
chr5:177536451|177536658 hsa-miR-1237-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6743-3p 1 1 0
chr5:177536451|177536658 hsa-miR-345-5p 1 0 0
chr5:177536451|177536658 hsa-miR-7106-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6804-3p 1 1 0
chr5:177536451|177536658 hsa-miR-4758-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6793-3p 1 0 0
chr5:177536451|177536658 hsa-miR-1224-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6741-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6752-3p 1 1 0
chr5:177536451|177536658 hsa-miR-6782-3p 0 1 0
chr5:177536451|177536658 hsa-miR-7848-3p 0 1 0
chr5:177536451|177536658 hsa-miR-4749-3p 1 0 0
chr5:177536451|177536658 hsa-miR-328-3p 1 0 0
chr5:177536451|177536658 hsa-miR-3151-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6777-3p 1 0 0
chr5:177536451|177536658 hsa-miR-1292-3p 1 0 0
chr5:177536451|177536658 hsa-miR-2277-5p 1 0 0
chr5:177536451|177536658 hsa-miR-6760-3p 1 1 0
chr5:177536451|177536658 hsa-miR-6802-3p 1 1 0
chr5:177536451|177536658 hsa-miR-3675-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6748-3p 1 0 0
chr5:177536451|177536658 hsa-miR-7152-5p 1 0 0
chr5:177536451|177536658 hsa-miR-3670 1 1 0
chr5:177536451|177536658 hsa-miR-3192-3p 1 0 0
chr5:177536451|177536658 hsa-miR-4433a-5p 1 0 0
chr5:177536451|177536658 hsa-miR-4750-3p 1 0 0
chr5:177536451|177536658 hsa-miR-4433b-5p 1 0 0
chr5:177536451|177536658 hsa-miR-6729-3p 1 0 0
chr5:177536451|177536658 hsa-miR-219b-5p 0 1 0
chr5:177536451|177536658 hsa-miR-6800-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6732-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6750-3p 1 0 0
chr5:177536451|177536658 hsa-miR-3162-3p 1 1 0
chr5:177536451|177536658 hsa-miR-6731-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6885-3p 1 0 0
chr5:177536451|177536658 hsa-miR-367-5p 0 1 0
chr5:177536451|177536658 hsa-miR-744-3p 1 1 0
chr5:177536451|177536658 hsa-miR-4685-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6754-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6799-3p 1 0 0
chr5:177536451|177536658 hsa-miR-10398-5p 1 1 0
chr5:177536451|177536658 hsa-miR-4722-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6727-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6893-3p 1 1 0
chr5:177536451|177536658 hsa-miR-6511a-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6756-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6784-3p 1 1 0
chr5:177536451|177536658 hsa-miR-6792-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6862-3p 1 1 0
chr5:177536451|177536658 hsa-miR-6805-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6810-3p 1 1 0
chr5:177536451|177536658 hsa-miR-10400-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6837-5p 0 1 0
chr5:177536451|177536658 hsa-miR-6775-3p 1 0 0
chr5:177536451|177536658 hsa-miR-3622a-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6511b-3p 1 1 0
chr5:177536451|177536658 hsa-miR-7114-3p 1 0 0
chr5:177536451|177536658 hsa-miR-6764-5p 0 1 0
chr5:177536451|177536658 hsa-miR-6827-3p 1 1 0
chr5:177536451|177536658 hsa-miR-4690-3p 1 0 0
chr5:177536451|177536658 hsa-miR-4769-3p 1 1 0
chr5:177536451|177536658 hsa-miR-3622b-3p 1 0 0
chr5:177536451|177536658 hsa-miR-412-3p 1 0 0
chr5:177536451|177536658 hsa-miR-550a-3p 1 0 0
chr5:177536451|177536658 hsa-miR-200c-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr5:177536451|177536658
ORF Type ORF1
Protein Length 67
Nucleotide Length 201
Protein Sequence MVGASSGAACWWRVDGSSDMALECGGQWQQQQGTLKPGQGKVLPGWWAAGVGGVGSQRSWGETGLEM
Nucleotide Sequence ATGGTGGGGGCATCTTCAGGAGCGGCATGCTGGTGGAGGGTAGATGGGAGCTCTGACATGGCCCTGGAGTGTGGGGGGCAGTGGCAGCAGCAACAGGGCACTCTGAAGCCTGGGCAGGGAAAGGTGCTGCCGGGGTGGTGGGCAGCAGGTGTGGGTGGGGTGGGGAGCCAAAGGAGCTGGGGTGAGACGGGATTAGAGATG
CircID chr5:177536451|177536658
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MGRERCCRGGGQQVWVGWGAKGAGVRRD
Nucleotide Sequence CTGGGCAGGGAAAGGTGCTGCCGGGGTGGTGGGCAGCAGGTGTGGGTGGGGTGGGGAGCCAAAGGAGCTGGGGTGAGACGGGATTAG
CircID chr5:177536451|177536658
ORF Type ORF3
Protein Length 51
Nucleotide Length 156
Protein Sequence MAPHPTHTCCPPPRQHLSLPRLQSALLLLPLPPTLQGHVRAPIYPPPACRS
Nucleotide Sequence TTGGCTCCCCACCCCACCCACACCTGCTGCCCACCACCCCGGCAGCACCTTTCCCTGCCCAGGCTTCAGAGTGCCCTGTTGCTGCTGCCACTGCCCCCCACACTCCAGGGCCATGTCAGAGCTCCCATCTACCCTCCACCAGCATGCCGCTCCTGA
CircID chr5:177536451|177536658
ORF Type ORF4
Protein Length 51
Nucleotide Length 153
Protein Sequence MLPTTPAAPFPAQASECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFS
Nucleotide Sequence CTGCTGCCCACCACCCCGGCAGCACCTTTCCCTGCCCAGGCTTCAGAGTGCCCTGTTGCTGCTGCCACTGCCCCCCACACTCCAGGGCCATGTCAGAGCTCCCATCTACCCTCCACCAGCATGCCGCTCCTGAAGATGCCCCCACCATTCTCG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab