CircRNA Information

General Information
circRNA Basic Information
CircID chr5:178210632|178210877
Strand +
CircType exon
Host Gene ENSG00000197451.9;
Algorism CIRI2;
Sequence CTGCTTCTGGGGGACCTGGTAATAAAAATCAGCCCATGATGGCGCTATGGCCTCTCAGACACCACACGCTGCCTAAACACCTAGAGCTCTGGAAATAGTCAACAGGAGAGTGATTTCCATGGGGGAAATTTTAAATAAGATGCACATGGGACAGGCAATAGAAAGTTTGCCAAGTTAAATTTGGTACATAATTGTGTTCACTCCATATCCAAACAAAGCATGTGTGCGATCAGTTGGTCGCTCCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:178210632|178210877 hsa-miR-182-5p 0 0 1
chr5:178210632|178210877 hsa-miR-182-3p 0 0 1
chr5:178210632|178210877 hsa-miR-122-5p 0 0 1
chr5:178210632|178210877 hsa-miR-122-3p 0 0 1
chr5:178210632|178210877 hsa-miR-34b-5p 0 0 1
chr5:178210632|178210877 hsa-miR-34b-3p 0 0 1
chr5:178210632|178210877 hsa-miR-940 0 0 1
chr5:178210632|178210877 hsa-miR-1261 0 0 1
chr5:178210632|178210877 hsa-miR-1267 0 0 1
chr5:178210632|178210877 hsa-miR-885-3p 1 1 1
chr5:178210632|178210877 hsa-miR-525-5p 0 0 1
chr5:178210632|178210877 hsa-miR-361-3p 0 0 1
chr5:178210632|178210877 hsa-miR-520a-5p 0 0 1
chr5:178210632|178210877 hsa-miR-513a-3p 0 0 1
chr5:178210632|178210877 hsa-miR-556-3p 0 0 1
chr5:178210632|178210877 hsa-miR-1308 0 0 1
chr5:178210632|178210877 hsa-miR-612 1 0 0
chr5:178210632|178210877 hsa-miR-762 1 0 0
chr5:178210632|178210877 hsa-miR-3147 1 0 0
chr5:178210632|178210877 hsa-miR-3911 1 0 0
chr5:178210632|178210877 hsa-miR-3937 1 0 0
chr5:178210632|178210877 hsa-miR-4467 1 0 0
chr5:178210632|178210877 hsa-miR-4692 0 1 0
chr5:178210632|178210877 hsa-miR-6860 1 0 0
chr5:178210632|178210877 hsa-miR-12119 1 0 0
chr5:178210632|178210877 hsa-miR-214-5p 0 1 0
chr5:178210632|178210877 hsa-miR-18a-3p 1 0 0
chr5:178210632|178210877 hsa-miR-15a-3p 0 1 0
chr5:178210632|178210877 hsa-miR-6765-5p 1 0 0
chr5:178210632|178210877 hsa-miR-6089 1 0 0
chr5:178210632|178210877 hsa-miR-3192-5p 1 1 0
chr5:178210632|178210877 hsa-miR-6796-5p 1 0 0
chr5:178210632|178210877 hsa-miR-6514-5p 0 1 0
chr5:178210632|178210877 hsa-miR-6821-5p 1 0 0
chr5:178210632|178210877 hsa-miR-6740-5p 1 1 0
chr5:178210632|178210877 hsa-miR-1247-5p 1 0 0
chr5:178210632|178210877 hsa-miR-6894-3p 1 0 0
chr5:178210632|178210877 hsa-miR-3677-3p 1 0 0
chr5:178210632|178210877 hsa-miR-2681-3p 0 1 0
chr5:178210632|178210877 hsa-miR-1266-3p 1 0 0
chr5:178210632|178210877 hsa-miR-339-5p 1 0 0
chr5:178210632|178210877 hsa-miR-6761-5p 0 1 0
chr5:178210632|178210877 hsa-miR-6748-3p 1 1 0
chr5:178210632|178210877 hsa-miR-4433a-5p 1 0 0
chr5:178210632|178210877 hsa-miR-4433b-5p 1 0 0
chr5:178210632|178210877 hsa-miR-6509-5p 1 0 0
chr5:178210632|178210877 hsa-miR-6847-3p 1 0 0
chr5:178210632|178210877 hsa-miR-652-3p 0 1 0
chr5:178210632|178210877 hsa-miR-3688-3p 0 1 0
chr5:178210632|178210877 hsa-miR-10400-5p 1 0 0
chr5:178210632|178210877 hsa-miR-1233-5p 1 0 0
chr5:178210632|178210877 hsa-miR-6812-5p 1 0 0
chr5:178210632|178210877 hsa-miR-5001-5p 1 0 0
chr5:178210632|178210877 hsa-miR-6813-5p 1 0 0
chr5:178210632|178210877 hsa-miR-3620-5p 1 0 0
chr5:178210632|178210877 hsa-miR-449c-5p 1 0 0
chr5:178210632|178210877 hsa-miR-4632-5p 1 0 0
chr5:178210632|178210877 hsa-miR-4685-5p 1 0 0
chr5:178210632|178210877 hsa-miR-4701-3p 1 0 0
chr5:178210632|178210877 hsa-miR-3187-5p 1 0 0
chr5:178210632|178210877 hsa-miR-6831-5p 1 0 0
chr5:178210632|178210877 hsa-miR-6511a-5p 1 0 0
chr5:178210632|178210877 hsa-miR-10400-3p 1 0 0
chr5:178210632|178210877 hsa-miR-1301-5p 1 0 0
chr5:178210632|178210877 hsa-miR-4670-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr5:178210632|178210877
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MEIVNRRVISMGEILNKMHMGQAIESLPS
Nucleotide Sequence CTGGAAATAGTCAACAGGAGAGTGATTTCCATGGGGGAAATTTTAAATAAGATGCACATGGGACAGGCAATAGAAAGTTTGCCAAGTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab