CircNet

General Information

circRNA Basic Information

CircID	chr5:179580947\|179601986
Strand	+
CircType	exon
Host Gene	ENSG00000176783.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	GCATGAAAGAATTACTGATGTCCTTGATCAAAAAAATTATGTGGAAGAACTTAACCGGCACTTGAGCTGCACAGTTGGGGATCTTCAAACCAAGATAGATGGCTTGGAAAAGACTAACTCAAAGCTTCAAGAAGAGGAGTTGCGGGAGCTTCAGGACGAGAAGGCAGAGCTGCAGAAGATCTGCGAGGAGCAGGAACAAGCCCTCCAGGAAATGGGCCTGCACCTCAGCCA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:179580947\|179601986	hsa-miR-127-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:179580947\|179601986
ORF Type	ORF1
Protein Length	44
Nucleotide Length	132
Protein Sequence	MAWKRLTQSFKKRSCGSFRTRRQSCRRSARSRNKPSRKWACTSA
Nucleotide Sequence	ATGGCTTGGAAAAGACTAACTCAAAGCTTCAAGAAGAGGAGTTGCGGGAGCTTCAGGACGAGAAGGCAGAGCTGCAGAAGATCTGCGAGGAGCAGGAACAAGCCCTCCAGGAAATGGGCCTGCACCTCAGCC

CircID	chr5:179580947\|179601986
ORF Type	ORF2
Protein Length	63
Nucleotide Length	189
Protein Sequence	VEELNRHLSCTVGDLQTKIDGLEKTNSKLQEEELRELQDEKAELQKICEEQEQALQEMGLHLS
Nucleotide Sequence	GTGGAAGAACTTAACCGGCACTTGAGCTGCACAGTTGGGGATCTTCAAACCAAGATAGATGGCTTGGAAAAGACTAACTCAAAGCTTCAAGAAGAGGAGTTGCGGGAGCTTCAGGACGAGAAGGCAGAGCTGCAGAAGATCTGCGAGGAGCAGGAACAAGCCCTCCAGGAAATGGGCCTGCACCTCAGC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:179580947\|179601986	KHSRP	1	0	0
chr5:179580947\|179601986	ELAVL1	3	1	1
chr5:179580947\|179601986	NUMA1	0	1	0
chr5:179580947\|179601986	PRPF8	0	1	1
chr5:179580947\|179601986	UPF1	0	1	0
chr5:179580947\|179601986	TAF15	0	3	0
chr5:179580947\|179601986	FUS	1	1	0
chr5:179580947\|179601986	GNL3	1	0	0
chr5:179580947\|179601986	DGCR8	1	1	1
chr5:179580947\|179601986	SRSF7	0	0	1
chr5:179580947\|179601986	SRSF1	0	0	3
chr5:179580947\|179601986	NOP58	0	7	3
chr5:179580947\|179601986	SRSF3	1	0	0
chr5:179580947\|179601986	U2AF1	1	0	1
chr5:179580947\|179601986	EIF3A	1	0	0
chr5:179580947\|179601986	ADAR	1	0	0
chr5:179580947\|179601986	U2AF2	10	1	8
chr5:179580947\|179601986	EIF3D	1	0	0
chr5:179580947\|179601986	DDX54	0	2	3
chr5:179580947\|179601986	EIF3G	1	0	0
chr5:179580947\|179601986	RBM10	2	0	0
chr5:179580947\|179601986	HNRNPM	2	0	0
chr5:179580947\|179601986	PTBP1	0	4	0
chr5:179580947\|179601986	HNRNPC	3	0	0
chr5:179580947\|179601986	TRA2A	0	0	3
chr5:179580947\|179601986	HNRNPA2B1	0	2	0
chr5:179580947\|179601986	EWSR1	0	1	0
chr5:179580947\|179601986	SMNDC1	0	0	1
chr5:179580947\|179601986	ACIN1	0	0	1
chr5:179580947\|179601986	RANGAP1	0	1	0
chr5:179580947\|179601986	FXR1	0	0	2
chr5:179580947\|179601986	IGF2BP3	0	0	1
chr5:179580947\|179601986	IGF2BP2	0	0	7
chr5:179580947\|179601986	HNRNPUL1	0	1	0
chr5:179580947\|179601986	TARDBP	12	2	1
chr5:179580947\|179601986	BUD13	0	0	1
chr5:179580947\|179601986	RBFOX2	0	2	0
chr5:179580947\|179601986	CNBP	0	2	0
chr5:179580947\|179601986	EIF4G2	1	0	0
chr5:179580947\|179601986	CSTF2T	0	0	1
chr5:179580947\|179601986	VIM	0	0	1
chr5:179580947\|179601986	NONO	3	0	0
chr5:179580947\|179601986	AGO2	0	0	1
chr5:179580947\|179601986	EIF3B	2	0	0
chr5:179580947\|179601986	EIF4A3	4	10	7
chr5:179580947\|179601986	FBL	0	6	1

CircRNA Information