CircRNA Information

General Information
circRNA Basic Information
CircID chr5:179617989|179618296
Strand -
CircType exon
Host Gene ENSG00000169045.16;
Algorism CIRI2;
Sequence CTCTTCCAAATCTATCTGACCCAAATCCATAGCCATCATTATAGCCATTGTAATCATCATAGCCTCCATAGCCTGAAAGACAAAGTACAATCAATCAAATAAAACACCTAGACAAAGGAACAGACGACTTGCCGAACCTTACGAATCCTCACGTACCTCCACCATAAGCACCACGCCTCATCCTCTCAAAGCCAGCTCCTCTGCCAATGCTGTTATACCCTCTACCAGCCCCAGGTCTGTCATAAGGACCTGGCCGCTGCATGGCCATAAGCTTTCGTGGTGGATCATAATGAGTTCTAACTTCAGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:179617989|179618296 hsa-miR-21-5p 0 0 1
chr5:179617989|179618296 hsa-miR-21-3p 0 0 1
chr5:179617989|179618296 hsa-miR-379-5p 0 0 1
chr5:179617989|179618296 hsa-miR-379-3p 0 0 1
chr5:179617989|179618296 hsa-miR-425-5p 0 0 1
chr5:179617989|179618296 hsa-miR-425-3p 0 0 1
chr5:179617989|179618296 hsa-miR-484 0 0 1
chr5:179617989|179618296 hsa-miR-511-5p 0 0 1
chr5:179617989|179618296 hsa-miR-511-3p 0 0 1
chr5:179617989|179618296 hsa-miR-584-5p 0 0 1
chr5:179617989|179618296 hsa-miR-584-3p 0 0 1
chr5:179617989|179618296 hsa-miR-631 0 0 1
chr5:179617989|179618296 hsa-miR-640 0 0 1
chr5:179617989|179618296 hsa-miR-650 0 0 1
chr5:179617989|179618296 hsa-miR-708-5p 0 0 1
chr5:179617989|179618296 hsa-miR-708-3p 0 0 1
chr5:179617989|179618296 hsa-miR-1290 0 0 1
chr5:179617989|179618296 hsa-miR-1246 0 0 1
chr5:179617989|179618296 hsa-miR-1255a 0 0 1
chr5:179617989|179618296 hsa-miR-1272 1 0 1
chr5:179617989|179618296 hsa-miR-1322 0 0 1
chr5:179617989|179618296 hsa-miR-28-5p 0 0 1
chr5:179617989|179618296 hsa-miR-876-5p 0 0 1
chr5:179617989|179618296 hsa-miR-508-3p 0 0 1
chr5:179617989|179618296 hsa-miR-590-5p 0 0 1
chr5:179617989|179618296 hsa-miR-1255b 0 0 1
chr5:179617989|179618296 hsa-miR-7 0 0 1
chr5:179617989|179618296 hsa-miR-1185 0 0 1
chr5:179617989|179618296 hsa-miR-219-5p 0 0 1
chr5:179617989|179618296 hsa-miR-571 1 0 0
chr5:179617989|179618296 hsa-miR-608 1 0 0
chr5:179617989|179618296 hsa-miR-762 1 0 0
chr5:179617989|179618296 hsa-miR-765 1 0 0
chr5:179617989|179618296 hsa-miR-760 1 0 0
chr5:179617989|179618296 hsa-miR-1294 1 0 0
chr5:179617989|179618296 hsa-miR-1268a 1 0 0
chr5:179617989|179618296 hsa-miR-2861 1 0 0
chr5:179617989|179618296 hsa-miR-3125 1 0 0
chr5:179617989|179618296 hsa-miR-3132 1 0 0
chr5:179617989|179618296 hsa-miR-3197 1 0 0
chr5:179617989|179618296 hsa-miR-4298 1 0 0
chr5:179617989|179618296 hsa-miR-4300 1 0 0
chr5:179617989|179618296 hsa-miR-4259 1 0 0
chr5:179617989|179618296 hsa-miR-3612 1 0 0
chr5:179617989|179618296 hsa-miR-3661 0 1 0
chr5:179617989|179618296 hsa-miR-3665 1 0 0
chr5:179617989|179618296 hsa-miR-3911 1 0 0
chr5:179617989|179618296 hsa-miR-3916 1 0 0
chr5:179617989|179618296 hsa-miR-1268b 1 0 0
chr5:179617989|179618296 hsa-miR-4450 1 0 0
chr5:179617989|179618296 hsa-miR-4458 1 0 0
chr5:179617989|179618296 hsa-miR-3135b 1 0 0
chr5:179617989|179618296 hsa-miR-4467 1 0 0
chr5:179617989|179618296 hsa-miR-3689c 1 0 0
chr5:179617989|179618296 hsa-miR-4487 1 1 0
chr5:179617989|179618296 hsa-miR-4498 1 1 0
chr5:179617989|179618296 hsa-miR-2392 1 0 0
chr5:179617989|179618296 hsa-miR-4526 1 0 0
chr5:179617989|179618296 hsa-miR-1587 1 0 0
chr5:179617989|179618296 hsa-miR-4689 1 0 0
chr5:179617989|179618296 hsa-miR-4721 1 0 0
chr5:179617989|179618296 hsa-miR-4736 1 0 0
chr5:179617989|179618296 hsa-miR-4739 1 0 0
chr5:179617989|179618296 hsa-miR-4741 1 0 0
chr5:179617989|179618296 hsa-miR-4748 1 0 0
chr5:179617989|179618296 hsa-miR-5194 1 0 0
chr5:179617989|179618296 hsa-miR-5787 1 0 0
chr5:179617989|179618296 hsa-miR-6084 1 0 0
chr5:179617989|179618296 hsa-miR-6085 1 0 0
chr5:179617989|179618296 hsa-miR-378j 1 0 0
chr5:179617989|179618296 hsa-miR-7150 1 0 0
chr5:179617989|179618296 hsa-miR-8075 1 0 0
chr5:179617989|179618296 hsa-miR-9900 0 1 0
chr5:179617989|179618296 hsa-miR-12114 1 1 0
chr5:179617989|179618296 hsa-miR-12115 1 0 0
chr5:179617989|179618296 hsa-miR-138-5p 1 0 0
chr5:179617989|179618296 hsa-miR-4433b-3p 1 0 0
chr5:179617989|179618296 hsa-miR-6734-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6765-5p 1 1 0
chr5:179617989|179618296 hsa-miR-125b-1-3p 1 0 0
chr5:179617989|179618296 hsa-miR-7106-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6894-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6857-5p 1 0 0
chr5:179617989|179618296 hsa-miR-4687-3p 1 0 0
chr5:179617989|179618296 hsa-miR-6510-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6804-5p 1 0 0
chr5:179617989|179618296 hsa-miR-5187-5p 1 0 0
chr5:179617989|179618296 hsa-miR-7114-5p 1 0 0
chr5:179617989|179618296 hsa-miR-3192-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6873-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6880-5p 1 1 0
chr5:179617989|179618296 hsa-miR-7847-3p 1 1 0
chr5:179617989|179618296 hsa-miR-3064-5p 1 0 0
chr5:179617989|179618296 hsa-miR-7160-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6890-5p 1 0 0
chr5:179617989|179618296 hsa-miR-3187-3p 0 1 0
chr5:179617989|179618296 hsa-miR-6721-5p 1 0 0
chr5:179617989|179618296 hsa-miR-197-5p 1 0 0
chr5:179617989|179618296 hsa-miR-8069 1 0 0
chr5:179617989|179618296 hsa-miR-6772-5p 1 0 0
chr5:179617989|179618296 hsa-miR-185-3p 1 1 0
chr5:179617989|179618296 hsa-miR-6732-5p 1 0 0
chr5:179617989|179618296 hsa-miR-3190-3p 1 0 0
chr5:179617989|179618296 hsa-miR-6805-5p 1 0 0
chr5:179617989|179618296 hsa-miR-1224-5p 1 0 0
chr5:179617989|179618296 hsa-miR-2467-3p 1 0 0
chr5:179617989|179618296 hsa-miR-6874-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6821-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6786-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6852-5p 0 1 0
chr5:179617989|179618296 hsa-miR-1226-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6740-5p 1 0 0
chr5:179617989|179618296 hsa-miR-1229-5p 1 0 0
chr5:179617989|179618296 hsa-miR-885-3p 1 0 0
chr5:179617989|179618296 hsa-miR-6771-5p 1 0 0
chr5:179617989|179618296 hsa-let-7b-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6823-5p 1 0 0
chr5:179617989|179618296 hsa-miR-877-5p 1 0 0
chr5:179617989|179618296 hsa-miR-485-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6749-5p 0 1 0
chr5:179617989|179618296 hsa-miR-4446-3p 1 0 0
chr5:179617989|179618296 hsa-miR-664b-5p 1 0 0
chr5:179617989|179618296 hsa-let-7c-5p 1 0 0
chr5:179617989|179618296 hsa-miR-501-5p 1 0 0
chr5:179617989|179618296 hsa-miR-4670-3p 0 1 0
chr5:179617989|179618296 hsa-miR-10400-5p 1 0 0
chr5:179617989|179618296 hsa-miR-1207-5p 1 0 0
chr5:179617989|179618296 hsa-miR-1233-5p 1 0 0
chr5:179617989|179618296 hsa-miR-1273h-5p 1 0 0
chr5:179617989|179618296 hsa-miR-3689b-3p 1 0 0
chr5:179617989|179618296 hsa-miR-4763-3p 1 0 0
chr5:179617989|179618296 hsa-miR-6769b-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6778-5p 1 0 0
chr5:179617989|179618296 hsa-miR-1343-5p 1 0 0
chr5:179617989|179618296 hsa-miR-5001-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6726-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6743-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6756-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6769a-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6803-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6813-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6819-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6851-5p 1 0 0
chr5:179617989|179618296 hsa-miR-7107-5p 1 0 0
chr5:179617989|179618296 hsa-miR-11181-3p 1 0 0
chr5:179617989|179618296 hsa-miR-6722-3p 1 0 0
chr5:179617989|179618296 hsa-miR-6751-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6763-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6779-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6797-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6808-5p 1 0 0
chr5:179617989|179618296 hsa-miR-7111-5p 1 0 0
chr5:179617989|179618296 hsa-miR-3620-5p 1 0 0
chr5:179617989|179618296 hsa-miR-4728-5p 1 0 0
chr5:179617989|179618296 hsa-miR-3689a-3p 1 0 0
chr5:179617989|179618296 hsa-miR-4632-5p 1 0 0
chr5:179617989|179618296 hsa-miR-4649-5p 1 0 0
chr5:179617989|179618296 hsa-miR-4726-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6729-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6846-5p 1 1 0
chr5:179617989|179618296 hsa-miR-6848-5p 1 1 0
chr5:179617989|179618296 hsa-miR-6858-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6831-5p 1 0 0
chr5:179617989|179618296 hsa-miR-939-5p 1 1 0
chr5:179617989|179618296 hsa-miR-4633-3p 1 0 0
chr5:179617989|179618296 hsa-miR-6856-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6736-5p 1 0 0
chr5:179617989|179618296 hsa-miR-7151-3p 1 0 0
chr5:179617989|179618296 hsa-miR-3679-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6766-5p 1 0 0
chr5:179617989|179618296 hsa-miR-5591-5p 1 0 0
chr5:179617989|179618296 hsa-miR-6791-5p 1 0 0
chr5:179617989|179618296 hsa-miR-9851-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr5:179617989|179618296
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MTQIHSHHYSHCNHHSLHSLKDKVQSIK
Nucleotide Sequence CTGACCCAAATCCATAGCCATCATTATAGCCATTGTAATCATCATAGCCTCCATAGCCTGAAAGACAAAGTACAATCAATCAAATAA
CircID chr5:179617989|179618296
ORF Type ORF2
Protein Length 39
Nucleotide Length 120
Protein Sequence MAMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGGGT
Nucleotide Sequence ATGGCCATGCAGCGGCCAGGTCCTTATGACAGACCTGGGGCTGGTAGAGGGTATAACAGCATTGGCAGAGGAGCTGGCTTTGAGAGGATGAGGCGTGGTGCTTATGGTGGAGGTACGTGA
CircID chr5:179617989|179618296
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MIVLCLSGYGGYDDYNGYNDGYGFGSDRFGR
Nucleotide Sequence TTGATTGTACTTTGTCTTTCAGGCTATGGAGGCTATGATGATTACAATGGCTATAATGATGGCTATGGATTTGGGTCAGATAGATTTGGAAGA
CircID chr5:179617989|179618296
ORF Type ORF4
Protein Length 42
Nucleotide Length 129
Protein Sequence LKLELIMIHHESLWPCSGQVLMTDLGLVEGITALAEELALRG
Nucleotide Sequence CTGAAGTTAGAACTCATTATGATCCACCACGAAAGCTTATGGCCATGCAGCGGCCAGGTCCTTATGACAGACCTGGGGCTGGTAGAGGGTATAACAGCATTGGCAGAGGAGCTGGCTTTGAGAGGATGA
CircID chr5:179617989|179618296
ORF Type ORF5
Protein Length 30
Nucleotide Length 90
Protein Sequence MYFVFQAMEAMMITMAIMMAMDLGQIDLEE
Nucleotide Sequence TTGTACTTTGTCTTTCAGGCTATGGAGGCTATGATGATTACAATGGCTATAATGATGGCTATGGATTTGGGTCAGATAGATTTGGAAGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab