CircRNA Information

General Information
circRNA Basic Information
CircID chr5:179618145|179618296
Strand -
CircType exon
Host Gene ENSG00000169045.16;
Algorism CIRI2;
Sequence CTCCACCATAAGCACCACGCCTCATCCTCTCAAAGCCAGCTCCTCTGCCAATGCTGTTATACCCTCTACCAGCCCCAGGTCTGTCATAAGGACCTGGCCGCTGCATGGCCATAAGCTTTCGTGGTGGATCATAATGAGTTCTAACTTCAGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:179618145|179618296 hsa-miR-21-5p 0 0 1
chr5:179618145|179618296 hsa-miR-21-3p 0 0 1
chr5:179618145|179618296 hsa-miR-379-5p 0 0 1
chr5:179618145|179618296 hsa-miR-379-3p 0 0 1
chr5:179618145|179618296 hsa-miR-425-5p 0 0 1
chr5:179618145|179618296 hsa-miR-425-3p 0 0 1
chr5:179618145|179618296 hsa-miR-584-5p 0 0 1
chr5:179618145|179618296 hsa-miR-584-3p 0 0 1
chr5:179618145|179618296 hsa-miR-631 0 0 1
chr5:179618145|179618296 hsa-miR-640 0 0 1
chr5:179618145|179618296 hsa-miR-708-5p 0 0 1
chr5:179618145|179618296 hsa-miR-708-3p 0 0 1
chr5:179618145|179618296 hsa-miR-1255a 0 0 1
chr5:179618145|179618296 hsa-miR-28-5p 0 0 1
chr5:179618145|179618296 hsa-miR-590-5p 0 0 1
chr5:179618145|179618296 hsa-miR-1255b 0 0 1
chr5:179618145|179618296 hsa-miR-571 1 0 0
chr5:179618145|179618296 hsa-miR-608 1 0 0
chr5:179618145|179618296 hsa-miR-762 1 0 0
chr5:179618145|179618296 hsa-miR-765 1 0 0
chr5:179618145|179618296 hsa-miR-1265 1 0 0
chr5:179618145|179618296 hsa-miR-1268a 1 0 0
chr5:179618145|179618296 hsa-miR-2861 1 0 0
chr5:179618145|179618296 hsa-miR-3125 1 0 0
chr5:179618145|179618296 hsa-miR-3132 1 0 0
chr5:179618145|179618296 hsa-miR-3197 1 0 0
chr5:179618145|179618296 hsa-miR-4300 1 0 0
chr5:179618145|179618296 hsa-miR-4316 1 0 0
chr5:179618145|179618296 hsa-miR-3661 0 1 0
chr5:179618145|179618296 hsa-miR-3916 1 0 0
chr5:179618145|179618296 hsa-miR-1268b 1 0 0
chr5:179618145|179618296 hsa-miR-3135b 1 0 0
chr5:179618145|179618296 hsa-miR-4467 1 0 0
chr5:179618145|179618296 hsa-miR-3689c 1 0 0
chr5:179618145|179618296 hsa-miR-4487 1 0 0
chr5:179618145|179618296 hsa-miR-4498 1 0 0
chr5:179618145|179618296 hsa-miR-2392 1 0 0
chr5:179618145|179618296 hsa-miR-4508 1 0 0
chr5:179618145|179618296 hsa-miR-4526 1 0 0
chr5:179618145|179618296 hsa-miR-1587 1 0 0
chr5:179618145|179618296 hsa-miR-4656 1 0 0
chr5:179618145|179618296 hsa-miR-4689 1 0 0
chr5:179618145|179618296 hsa-miR-4710 1 0 0
chr5:179618145|179618296 hsa-miR-4739 1 0 0
chr5:179618145|179618296 hsa-miR-4741 1 0 0
chr5:179618145|179618296 hsa-miR-4784 1 0 0
chr5:179618145|179618296 hsa-miR-5194 1 0 0
chr5:179618145|179618296 hsa-miR-5787 1 0 0
chr5:179618145|179618296 hsa-miR-6084 1 0 0
chr5:179618145|179618296 hsa-miR-6085 1 0 0
chr5:179618145|179618296 hsa-miR-6863 1 0 0
chr5:179618145|179618296 hsa-miR-7150 1 0 0
chr5:179618145|179618296 hsa-miR-9900 0 1 0
chr5:179618145|179618296 hsa-miR-12115 1 0 0
chr5:179618145|179618296 hsa-miR-138-5p 1 0 0
chr5:179618145|179618296 hsa-miR-4433b-3p 1 0 0
chr5:179618145|179618296 hsa-miR-6734-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6765-5p 1 1 0
chr5:179618145|179618296 hsa-miR-7106-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6894-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6799-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6510-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6804-5p 1 0 0
chr5:179618145|179618296 hsa-miR-5187-5p 1 0 0
chr5:179618145|179618296 hsa-miR-3192-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6873-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6880-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6744-5p 1 0 0
chr5:179618145|179618296 hsa-miR-3064-5p 1 0 0
chr5:179618145|179618296 hsa-miR-7160-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6890-5p 1 0 0
chr5:179618145|179618296 hsa-miR-3187-3p 0 1 0
chr5:179618145|179618296 hsa-miR-6721-5p 1 0 0
chr5:179618145|179618296 hsa-miR-197-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6772-5p 1 0 0
chr5:179618145|179618296 hsa-miR-185-3p 1 1 0
chr5:179618145|179618296 hsa-miR-6732-5p 1 0 0
chr5:179618145|179618296 hsa-miR-3190-3p 1 0 0
chr5:179618145|179618296 hsa-miR-6805-5p 1 0 0
chr5:179618145|179618296 hsa-miR-2467-3p 1 0 0
chr5:179618145|179618296 hsa-miR-6782-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6874-5p 1 0 0
chr5:179618145|179618296 hsa-miR-3150b-3p 1 0 0
chr5:179618145|179618296 hsa-miR-6852-5p 0 1 0
chr5:179618145|179618296 hsa-miR-1226-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6740-5p 1 0 0
chr5:179618145|179618296 hsa-miR-885-3p 1 0 0
chr5:179618145|179618296 hsa-miR-6771-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6823-5p 1 0 0
chr5:179618145|179618296 hsa-miR-877-5p 1 0 0
chr5:179618145|179618296 hsa-miR-485-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6749-5p 0 1 0
chr5:179618145|179618296 hsa-miR-6847-5p 1 0 0
chr5:179618145|179618296 hsa-miR-4446-3p 1 0 0
chr5:179618145|179618296 hsa-miR-4715-5p 1 0 0
chr5:179618145|179618296 hsa-miR-423-5p 1 0 0
chr5:179618145|179618296 hsa-miR-7846-3p 1 0 0
chr5:179618145|179618296 hsa-miR-3681-5p 1 0 0
chr5:179618145|179618296 hsa-miR-1306-3p 1 0 0
chr5:179618145|179618296 hsa-miR-1244 1 0 0
chr5:179618145|179618296 hsa-miR-4670-3p 0 1 0
chr5:179618145|179618296 hsa-miR-10400-5p 1 0 0
chr5:179618145|179618296 hsa-miR-1207-5p 1 0 0
chr5:179618145|179618296 hsa-miR-1233-5p 1 0 0
chr5:179618145|179618296 hsa-miR-1273h-5p 1 0 0
chr5:179618145|179618296 hsa-miR-3689b-3p 1 0 0
chr5:179618145|179618296 hsa-miR-4763-3p 1 0 0
chr5:179618145|179618296 hsa-miR-6778-5p 1 0 0
chr5:179618145|179618296 hsa-miR-1343-5p 1 0 0
chr5:179618145|179618296 hsa-miR-5001-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6726-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6743-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6769a-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6803-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6813-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6851-5p 1 0 0
chr5:179618145|179618296 hsa-miR-7107-5p 1 0 0
chr5:179618145|179618296 hsa-miR-11181-3p 1 0 0
chr5:179618145|179618296 hsa-miR-6722-3p 1 0 0
chr5:179618145|179618296 hsa-miR-6763-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6779-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6780a-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6797-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6808-5p 1 0 0
chr5:179618145|179618296 hsa-miR-7111-5p 1 0 0
chr5:179618145|179618296 hsa-miR-3620-5p 1 0 0
chr5:179618145|179618296 hsa-miR-4728-5p 1 0 0
chr5:179618145|179618296 hsa-miR-1909-3p 1 0 0
chr5:179618145|179618296 hsa-miR-3689a-3p 1 0 0
chr5:179618145|179618296 hsa-miR-4632-5p 1 0 0
chr5:179618145|179618296 hsa-miR-4649-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6729-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6846-5p 1 1 0
chr5:179618145|179618296 hsa-miR-6831-5p 1 0 0
chr5:179618145|179618296 hsa-miR-939-5p 1 0 0
chr5:179618145|179618296 hsa-miR-4633-3p 1 0 0
chr5:179618145|179618296 hsa-miR-6856-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6736-5p 1 0 0
chr5:179618145|179618296 hsa-miR-3679-5p 1 0 0
chr5:179618145|179618296 hsa-miR-5591-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6791-5p 1 0 0
chr5:179618145|179618296 hsa-miR-9851-5p 1 0 0
chr5:179618145|179618296 hsa-miR-6884-5p 1 0 0
chr5:179618145|179618296 hsa-miR-664a-5p 1 0 0
chr5:179618145|179618296 hsa-miR-1255b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr5:179618145|179618296
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MAMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGG
Nucleotide Sequence ATGGCCATGCAGCGGCCAGGTCCTTATGACAGACCTGGGGCTGGTAGAGGGTATAACAGCATTGGCAGAGGAGCTGGCTTTGAGAGGATGAGGCGTGGTGCTTATGGTGGA
CircID chr5:179618145|179618296
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence LKLELIMIHHESLWPCSGQVLMTDLGLVEGITALAEELALRG
Nucleotide Sequence CTGAAGTTAGAACTCATTATGATCCACCACGAAAGCTTATGGCCATGCAGCGGCCAGGTCCTTATGACAGACCTGGGGCTGGTAGAGGGTATAACAGCATTGGCAGAGGAGCTGGCTTTGAGAGGATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab