CircNet

General Information

circRNA Basic Information

CircID	chr5:179709873\|179716294
Strand	+
CircType	exon
Host Gene	ENSG00000127022.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	GATCAGTTCCATGACAAGACCCCTTATACGATTATGTTTGGTCCAGATAAATGTGGAGAGGACTATAAACTGCACTTCATCTTCCGACACAAAAACCCCAAAACGGGTATCTATGAAGAAAAACATGCTAAGAGGCCAGATGCAGATCTGAAGACCTATTTTACTGATAAGAAAACACATCTTTACACACTAATCTTGAATCCAGATAATAGTTTTGAAATACTGGTTGACCAATCTGTGGTGAATAGTGGAAATCTGCTCAATGACATGACTCCTCCTGTAAATCCTTCACGTGAAATTGAGGACCCAGAAGACCGGAAGCCCGAGGATTGGGATGAAAGACCAAAAATCCCAGATCCAGAAGCTGTCAAGCCAGATGACTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:179709873\|179716294	hsa-miR-205-5p	0	0	1
chr5:179709873\|179716294	hsa-miR-205-3p	0	0	1
chr5:179709873\|179716294	hsa-miR-200b-5p	0	0	1
chr5:179709873\|179716294	hsa-miR-200b-3p	0	0	1
chr5:179709873\|179716294	hsa-miR-200c-5p	0	0	1
chr5:179709873\|179716294	hsa-miR-200c-3p	0	0	1
chr5:179709873\|179716294	hsa-miR-429	0	0	1
chr5:179709873\|179716294	hsa-miR-563	0	0	1
chr5:179709873\|179716294	hsa-miR-605-5p	0	0	1
chr5:179709873\|179716294	hsa-miR-605-3p	0	0	1
chr5:179709873\|179716294	hsa-miR-622	0	0	1
chr5:179709873\|179716294	hsa-miR-633	0	0	1
chr5:179709873\|179716294	hsa-miR-671-5p	1	1	1
chr5:179709873\|179716294	hsa-miR-486-5p	0	0	1
chr5:179709873\|179716294	hsa-miR-1224-5p	0	1	1
chr5:179709873\|179716294	hsa-miR-767-3p	0	1	1
chr5:179709873\|179716294	hsa-miR-769-3p	0	0	1
chr5:179709873\|179716294	hsa-miR-450b-3p	0	0	1
chr5:179709873\|179716294	hsa-miR-548c-3p	0	0	1
chr5:179709873\|179716294	hsa-miR-500	0	0	1
chr5:179709873\|179716294	hsa-miR-203	0	0	1
chr5:179709873\|179716294	hsa-miR-611	1	0	0
chr5:179709873\|179716294	hsa-miR-665	1	1	0
chr5:179709873\|179716294	hsa-miR-711	0	1	0
chr5:179709873\|179716294	hsa-miR-3131	1	0	0
chr5:179709873\|179716294	hsa-miR-3139	0	1	0
chr5:179709873\|179716294	hsa-miR-4751	0	1	0
chr5:179709873\|179716294	hsa-miR-5680	1	0	0
chr5:179709873\|179716294	hsa-miR-6728-5p	0	1	0
chr5:179709873\|179716294	hsa-miR-6804-5p	1	0	0
chr5:179709873\|179716294	hsa-miR-5187-5p	0	1	0
chr5:179709873\|179716294	hsa-miR-6757-5p	0	1	0
chr5:179709873\|179716294	hsa-miR-1226-5p	0	1	0
chr5:179709873\|179716294	hsa-miR-296-3p	0	1	0
chr5:179709873\|179716294	hsa-miR-7158-5p	0	1	0
chr5:179709873\|179716294	hsa-miR-6819-5p	1	1	0
chr5:179709873\|179716294	hsa-miR-6849-5p	1	0	0
chr5:179709873\|179716294	hsa-miR-323b-5p	1	0	0
chr5:179709873\|179716294	hsa-miR-708-5p	0	1	0
chr5:179709873\|179716294	hsa-miR-582-3p	0	1	0
chr5:179709873\|179716294	hsa-miR-380-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:179709873\|179716294
ORF Type	ORF1
Protein Length	116
Nucleotide Length	348
Protein Sequence	MFGPDKCGEDYKLHFIFRHKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIPDPEAVKPDD
Nucleotide Sequence	ATGTTTGGTCCAGATAAATGTGGAGAGGACTATAAACTGCACTTCATCTTCCGACACAAAAACCCCAAAACGGGTATCTATGAAGAAAAACATGCTAAGAGGCCAGATGCAGATCTGAAGACCTATTTTACTGATAAGAAAACACATCTTTACACACTAATCTTGAATCCAGATAATAGTTTTGAAATACTGGTTGACCAATCTGTGGTGAATAGTGGAAATCTGCTCAATGACATGACTCCTCCTGTAAATCCTTCACGTGAAATTGAGGACCCAGAAGACCGGAAGCCCGAGGATTGGGATGAAAGACCAAAAATCCCAGATCCAGAAGCTGTCAAGCCAGATGAC

CircID	chr5:179709873\|179716294
ORF Type	ORF2
Protein Length	60
Nucleotide Length	180
Protein Sequence	MCFLISKIGLQICIWPLSMFFFIDTRFGVFVSEDEVQFIVLSTFIWTKHNRIRGLVMELI
Nucleotide Sequence	ATGTGTTTTCTTATCAGTAAAATAGGTCTTCAGATCTGCATCTGGCCTCTTAGCATGTTTTTCTTCATAGATACCCGTTTTGGGGTTTTTGTGTCGGAAGATGAAGTGCAGTTTATAGTCCTCTCCACATTTATCTGGACCAAACATAATCGTATAAGGGGTCTTGTCATGGAACTGATC

CircID	chr5:179709873\|179716294
ORF Type	ORF3
Protein Length	47
Nucleotide Length	141
Protein Sequence	MTRPLIRLCLVQINVERTINCTSSSDTKTPKRVSMKKNMLRGQMQI*
Nucleotide Sequence	ATGACAAGACCCCTTATACGATTATGTTTGGTCCAGATAAATGTGGAGAGGACTATAAACTGCACTTCATCTTCCGACACAAAAACCCCAAAACGGGTATCTATGAAGAAAAACATGCTAAGAGGCCAGATGCAGATCTGA

CircID	chr5:179709873\|179716294
ORF Type	ORF1
Protein Length	61
Nucleotide Length	183
Protein Sequence	MTASGSGIFGLSSQSSGFRSSGSSISREGFTGGVMSLSRFPLFTTDWSTSISKLLSGFKTD
Nucleotide Sequence	TTGACAGCTTCTGGATCTGGGATTTTTGGTCTTTCATCCCAATCCTCGGGCTTCCGGTCTTCTGGGTCCTCAATTTCACGTGAAGGATTTACAGGAGGAGTCATGTCATTGAGCAGATTTCCACTATTCACCACAGATTGGTCAACCAGTATTTCAAAACTATTATCTGGATTCAAGACTGAT

CircID	chr5:179709873\|179716294
ORF Type	ORF2
Protein Length	33
Nucleotide Length	102
Protein Sequence	MDLGFLVFHPNPRASGLLGPQFHVKDLQEESCH
Nucleotide Sequence	CTGGATCTGGGATTTTTGGTCTTTCATCCCAATCCTCGGGCTTCCGGTCTTCTGGGTCCTCAATTTCACGTGAAGGATTTACAGGAGGAGTCATGTCATTGA

CircID	chr5:179709873\|179716294
ORF Type	ORF3
Protein Length	28
Nucleotide Length	84
Protein Sequence	MRTQKTGSPRIGMKDQKSQIQKLSSQMT
Nucleotide Sequence	TTGAGGACCCAGAAGACCGGAAGCCCGAGGATTGGGATGAAAGACCAAAAATCCCAGATCCAGAAGCTGTCAAGCCAGATGACT

CircID	chr5:179709873\|179716294
ORF Type	ORF4
Protein Length	62
Nucleotide Length	186
Protein Sequence	MNPDNSFEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIPDPEAVKPDD
Nucleotide Sequence	TTGAATCCAGATAATAGTTTTGAAATACTGGTTGACCAATCTGTGGTGAATAGTGGAAATCTGCTCAATGACATGACTCCTCCTGTAAATCCTTCACGTGAAATTGAGGACCCAGAAGACCGGAAGCCCGAGGATTGGGATGAAAGACCAAAAATCCCAGATCCAGAAGCTGTCAAGCCAGATGAC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:179709873\|179716294	RBM6	0	1	0
chr5:179709873\|179716294	RBM5	1	0	1
chr5:179709873\|179716294	SLBP	0	0	1
chr5:179709873\|179716294	MOV10	2	0	2
chr5:179709873\|179716294	ELAVL1	9	1	2
chr5:179709873\|179716294	NUMA1	0	0	2
chr5:179709873\|179716294	KHDRBS1	0	0	1
chr5:179709873\|179716294	ZC3H7B	1	0	0
chr5:179709873\|179716294	RC3H1	1	0	0
chr5:179709873\|179716294	PRPF8	2	2	2
chr5:179709873\|179716294	DDX42	0	0	2
chr5:179709873\|179716294	UPF1	3	0	5
chr5:179709873\|179716294	TNRC6A	0	1	2
chr5:179709873\|179716294	CAPRIN1	1	0	0
chr5:179709873\|179716294	FMR1	1	0	7
chr5:179709873\|179716294	CPSF6	0	0	2
chr5:179709873\|179716294	SAFB2	0	0	4
chr5:179709873\|179716294	IGF2BP3	1	0	5
chr5:179709873\|179716294	TROVE2	0	0	1
chr5:179709873\|179716294	FUS	2	1	1
chr5:179709873\|179716294	GNL3	1	0	2
chr5:179709873\|179716294	DGCR8	0	1	5
chr5:179709873\|179716294	SRSF7	1	0	3
chr5:179709873\|179716294	SRSF1	1	0	14
chr5:179709873\|179716294	NOP58	2	2	4
chr5:179709873\|179716294	SRSF3	0	0	1
chr5:179709873\|179716294	U2AF1	0	0	2
chr5:179709873\|179716294	NOP56	0	1	1
chr5:179709873\|179716294	SRSF9	0	0	2
chr5:179709873\|179716294	HNRNPU	0	0	5
chr5:179709873\|179716294	DDX54	0	2	8
chr5:179709873\|179716294	RBM10	0	0	1
chr5:179709873\|179716294	HNRNPA2B1	0	0	4
chr5:179709873\|179716294	SF3A3	1	0	1
chr5:179709873\|179716294	PTBP1	2	1	5
chr5:179709873\|179716294	HNRNPC	1	0	0
chr5:179709873\|179716294	TRA2A	0	0	3
chr5:179709873\|179716294	METTL14	0	0	1
chr5:179709873\|179716294	KHSRP	3	0	0
chr5:179709873\|179716294	ZNF184	0	0	4
chr5:179709873\|179716294	DDX3X	2	0	3
chr5:179709873\|179716294	XRN2	0	0	1
chr5:179709873\|179716294	LARP7	0	0	2
chr5:179709873\|179716294	SMNDC1	4	0	4
chr5:179709873\|179716294	MSI2	0	0	4
chr5:179709873\|179716294	DHX9	0	1	0
chr5:179709873\|179716294	ACIN1	7	1	8
chr5:179709873\|179716294	RANGAP1	0	0	2
chr5:179709873\|179716294	LIN28A	0	0	3
chr5:179709873\|179716294	LIN28B	0	0	1
chr5:179709873\|179716294	FXR1	2	0	2
chr5:179709873\|179716294	FXR2	0	1	4
chr5:179709873\|179716294	SND1	3	2	7
chr5:179709873\|179716294	IGF2BP1	1	0	7
chr5:179709873\|179716294	GTF2F1	2	0	0
chr5:179709873\|179716294	U2AF2	15	2	9
chr5:179709873\|179716294	IGF2BP2	4	0	16
chr5:179709873\|179716294	NPM1	1	0	0
chr5:179709873\|179716294	HNRNPUL1	0	0	3
chr5:179709873\|179716294	TARDBP	0	1	2
chr5:179709873\|179716294	YTHDC1	0	0	2
chr5:179709873\|179716294	FBL	1	1	5
chr5:179709873\|179716294	BUD13	0	1	2
chr5:179709873\|179716294	RBFOX2	0	0	1
chr5:179709873\|179716294	CNBP	1	0	1
chr5:179709873\|179716294	SLTM	0	1	3
chr5:179709873\|179716294	EIF4G2	0	0	2
chr5:179709873\|179716294	RBM47	2	1	2
chr5:179709873\|179716294	CSTF2T	0	1	4
chr5:179709873\|179716294	BCCIP	0	0	1
chr5:179709873\|179716294	VIM	0	0	1
chr5:179709873\|179716294	RBM27	0	0	2
chr5:179709873\|179716294	LARP4B	0	0	1
chr5:179709873\|179716294	TIAL1	1	0	1
chr5:179709873\|179716294	RTCB	0	0	1
chr5:179709873\|179716294	HNRNPK	1	0	0
chr5:179709873\|179716294	YWHAG	0	0	2
chr5:179709873\|179716294	AIFM1	0	0	1
chr5:179709873\|179716294	AGO1	0	0	2
chr5:179709873\|179716294	EIF4A3	4	2	4
chr5:179709873\|179716294	AGO2	2	0	15

CircRNA Information