CircNet

General Information

circRNA Basic Information

CircID	chr5:179709873\|179720560
Strand	+
CircType	exon
Host Gene	ENSG00000127022.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	GATCAGTTCCATGACAAGACCCCTTATACGATTATGTTTGGTCCAGATAAATGTGGAGAGGACTATAAACTGCACTTCATCTTCCGACACAAAAACCCCAAAACGGGTATCTATGAAGAAAAACATGCTAAGAGGCCAGATGCAGATCTGAAGACCTATTTTACTGATAAGAAAACACATCTTTACACACTAATCTTGAATCCAGATAATAGTTTTGAAATACTGGTTGACCAATCTGTGGTGAATAGTGGAAATCTGCTCAATGACATGACTCCTCCTGTAAATCCTTCACGTGAAATTGAGGACCCAGAAGACCGGAAGCCCGAGGATTGGGATGAAAGACCAAAAATCCCAGATCCAGAAGCTGTCAAGCCAGATGACTGGGATGAAGATGCCCCTGCTAAGATTCCAGATGAAGAGGCCACAAAACCCGAAGGCTGGTTAGATGATGAGCCTGAGTACGTACCTGATCCAGACGCAGAGAAACCTGAGGATTGGGATGAAGACATGGATGGAGAATGGGAGGCTCCTCAGATTGCCAACCCTAGATGTGAGTCAGCTCCTGGATGTGGTGTCTGGCAGCGACCTGTGATTGACAACCCCAATTATAAAGGCAAATGGAAGCCTCCTATGATTGACAATCCCAGTTACCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:179709873\|179720560	hsa-miR-198	0	0	1
chr5:179709873\|179720560	hsa-miR-185-5p	0	0	1
chr5:179709873\|179720560	hsa-miR-185-3p	0	0	1
chr5:179709873\|179720560	hsa-miR-340-5p	0	0	1
chr5:179709873\|179720560	hsa-miR-340-3p	0	0	1
chr5:179709873\|179720560	hsa-miR-133b	0	0	1
chr5:179709873\|179720560	hsa-miR-570-5p	0	0	1
chr5:179709873\|179720560	hsa-miR-570-3p	0	0	1
chr5:179709873\|179720560	hsa-miR-577	0	0	1
chr5:179709873\|179720560	hsa-miR-603	0	0	1
chr5:179709873\|179720560	hsa-miR-641	0	1	1
chr5:179709873\|179720560	hsa-miR-935	0	0	1
chr5:179709873\|179720560	hsa-miR-1231	0	0	1
chr5:179709873\|179720560	hsa-miR-548g-5p	0	0	1
chr5:179709873\|179720560	hsa-miR-548g-3p	0	0	1
chr5:179709873\|179720560	hsa-miR-671-5p	0	0	1
chr5:179709873\|179720560	hsa-miR-136-5p	0	1	1
chr5:179709873\|179720560	hsa-miR-885-3p	0	1	1
chr5:179709873\|179720560	hsa-miR-142-5p	0	0	1
chr5:179709873\|179720560	hsa-miR-490-5p	0	0	1
chr5:179709873\|179720560	hsa-miR-576-3p	0	0	1
chr5:179709873\|179720560	hsa-miR-362-3p	0	0	1
chr5:179709873\|179720560	hsa-miR-548d-3p	0	0	1
chr5:179709873\|179720560	hsa-miR-329	0	0	1
chr5:179709873\|179720560	hsa-miR-549	0	0	1
chr5:179709873\|179720560	hsa-miR-133a	0	0	1
chr5:179709873\|179720560	hsa-miR-608	1	0	0
chr5:179709873\|179720560	hsa-miR-3132	1	0	0
chr5:179709873\|179720560	hsa-miR-3941	0	1	0
chr5:179709873\|179720560	hsa-miR-1268b	1	0	0
chr5:179709873\|179720560	hsa-miR-4462	1	0	0
chr5:179709873\|179720560	hsa-miR-4491	1	0	0
chr5:179709873\|179720560	hsa-miR-4534	0	1	0
chr5:179709873\|179720560	hsa-miR-4657	0	1	0
chr5:179709873\|179720560	hsa-miR-4739	1	0	0
chr5:179709873\|179720560	hsa-miR-4801	0	1	0
chr5:179709873\|179720560	hsa-miR-5192	1	0	0
chr5:179709873\|179720560	hsa-miR-5683	0	1	0
chr5:179709873\|179720560	hsa-miR-5787	1	0	0
chr5:179709873\|179720560	hsa-miR-6088	1	0	0
chr5:179709873\|179720560	hsa-miR-6863	0	1	0
chr5:179709873\|179720560	hsa-miR-8064	1	0	0
chr5:179709873\|179720560	hsa-miR-8070	1	1	0
chr5:179709873\|179720560	hsa-miR-8082	1	1	0
chr5:179709873\|179720560	hsa-miR-141-5p	0	1	0
chr5:179709873\|179720560	hsa-miR-6765-5p	1	0	0
chr5:179709873\|179720560	hsa-miR-6894-5p	1	0	0
chr5:179709873\|179720560	hsa-miR-6857-5p	1	0	0
chr5:179709873\|179720560	hsa-miR-6089	1	0	0
chr5:179709873\|179720560	hsa-miR-6757-5p	1	0	0
chr5:179709873\|179720560	hsa-miR-6880-5p	1	0	0
chr5:179709873\|179720560	hsa-miR-197-5p	1	0	0
chr5:179709873\|179720560	hsa-miR-28-3p	0	1	0
chr5:179709873\|179720560	hsa-miR-2467-5p	0	1	0
chr5:179709873\|179720560	hsa-miR-3156-5p	1	0	0
chr5:179709873\|179720560	hsa-miR-652-5p	0	1	0
chr5:179709873\|179720560	hsa-miR-4743-5p	1	1	0
chr5:179709873\|179720560	hsa-miR-584-3p	0	1	0
chr5:179709873\|179720560	hsa-miR-4639-5p	0	1	0
chr5:179709873\|179720560	hsa-miR-4802-3p	0	1	0
chr5:179709873\|179720560	hsa-miR-10400-5p	1	0	0
chr5:179709873\|179720560	hsa-miR-1207-5p	1	0	0
chr5:179709873\|179720560	hsa-miR-6779-5p	0	1	0
chr5:179709873\|179720560	hsa-miR-4726-5p	1	0	0
chr5:179709873\|179720560	hsa-miR-6845-5p	1	1	0
chr5:179709873\|179720560	hsa-miR-137-5p	0	1	0
chr5:179709873\|179720560	hsa-miR-4670-5p	0	1	0
chr5:179709873\|179720560	hsa-miR-217-3p	0	1	0

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:179709873\|179720560
ORF Type	ORF1
Protein Length	207
Nucleotide Length	621
Protein Sequence	MFGPDKCGEDYKLHFIFRHKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIPDPEAVKPDDWDEDAPAKIPDEEATKPEGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKPPMIDNPSYQ
Nucleotide Sequence	ATGTTTGGTCCAGATAAATGTGGAGAGGACTATAAACTGCACTTCATCTTCCGACACAAAAACCCCAAAACGGGTATCTATGAAGAAAAACATGCTAAGAGGCCAGATGCAGATCTGAAGACCTATTTTACTGATAAGAAAACACATCTTTACACACTAATCTTGAATCCAGATAATAGTTTTGAAATACTGGTTGACCAATCTGTGGTGAATAGTGGAAATCTGCTCAATGACATGACTCCTCCTGTAAATCCTTCACGTGAAATTGAGGACCCAGAAGACCGGAAGCCCGAGGATTGGGATGAAAGACCAAAAATCCCAGATCCAGAAGCTGTCAAGCCAGATGACTGGGATGAAGATGCCCCTGCTAAGATTCCAGATGAAGAGGCCACAAAACCCGAAGGCTGGTTAGATGATGAGCCTGAGTACGTACCTGATCCAGACGCAGAGAAACCTGAGGATTGGGATGAAGACATGGATGGAGAATGGGAGGCTCCTCAGATTGCCAACCCTAGATGTGAGTCAGCTCCTGGATGTGGTGTCTGGCAGCGACCTGTGATTGACAACCCCAATTATAAAGGCAAATGGAAGCCTCCTATGATTGACAATCCCAGTTACCAG

CircID	chr5:179709873\|179720560
ORF Type	ORF2
Protein Length	109
Nucleotide Length	327
Protein Sequence	MSSSQSSGFSASGSGTYSGSSSNQPSGFVASSSGILAGASSSQSSGLTASGSGIFGLSSQSSGFRSSGSSISREGFTGGVMSLSRFPLFTTDWSTSISKLLSGFKISV*
Nucleotide Sequence	ATGTCTTCATCCCAATCCTCAGGTTTCTCTGCGTCTGGATCAGGTACGTACTCAGGCTCATCATCTAACCAGCCTTCGGGTTTTGTGGCCTCTTCATCTGGAATCTTAGCAGGGGCATCTTCATCCCAGTCATCTGGCTTGACAGCTTCTGGATCTGGGATTTTTGGTCTTTCATCCCAATCCTCGGGCTTCCGGTCTTCTGGGTCCTCAATTTCACGTGAAGGATTTACAGGAGGAGTCATGTCATTGAGCAGATTTCCACTATTCACCACAGATTGGTCAACCAGTATTTCAAAACTATTATCTGGATTCAAGATTAGTGTGTAA

CircID	chr5:179709873\|179720560
ORF Type	ORF3
Protein Length	60
Nucleotide Length	180
Protein Sequence	MCFLISKIGLQICIWPLSMFFFIDTRFGVFVSEDEVQFIVLSTFIWTKHNRIRGLVMELI
Nucleotide Sequence	ATGTGTTTTCTTATCAGTAAAATAGGTCTTCAGATCTGCATCTGGCCTCTTAGCATGTTTTTCTTCATAGATACCCGTTTTGGGGTTTTTGTGTCGGAAGATGAAGTGCAGTTTATAGTCCTCTCCACATTTATCTGGACCAAACATAATCGTATAAGGGGTCTTGTCATGGAACTGATC

CircID	chr5:179709873\|179720560
ORF Type	ORF4
Protein Length	49
Nucleotide Length	147
Protein Sequence	MMSLSTYLIQTQRNLRIGMKTWMENGRLLRLPTLDVSQLLDVVSGSDL*
Nucleotide Sequence	ATGATGAGCCTGAGTACGTACCTGATCCAGACGCAGAGAAACCTGAGGATTGGGATGAAGACATGGATGGAGAATGGGAGGCTCCTCAGATTGCCAACCCTAGATGTGAGTCAGCTCCTGGATGTGGTGTCTGGCAGCGACCTGTGA

CircID	chr5:179709873\|179720560
ORF Type	ORF5
Protein Length	47
Nucleotide Length	141
Protein Sequence	MTRPLIRLCLVQINVERTINCTSSSDTKTPKRVSMKKNMLRGQMQI*
Nucleotide Sequence	ATGACAAGACCCCTTATACGATTATGTTTGGTCCAGATAAATGTGGAGAGGACTATAAACTGCACTTCATCTTCCGACACAAAAACCCCAAAACGGGTATCTATGAAGAAAAACATGCTAAGAGGCCAGATGCAGATCTGA

CircID	chr5:179709873\|179720560
ORF Type	ORF6
Protein Length	37
Nucleotide Length	111
Protein Sequence	MKDQKSQIQKLSSQMTGMKMPLLRFQMKRPQNPKAG*
Nucleotide Sequence	ATGAAAGACCAAAAATCCCAGATCCAGAAGCTGTCAAGCCAGATGACTGGGATGAAGATGCCCCTGCTAAGATTCCAGATGAAGAGGCCACAAAACCCGAAGGCTGGTTAG

CircID	chr5:179709873\|179720560
ORF Type	ORF1
Protein Length	32
Nucleotide Length	99
Protein Sequence	LVTGIVNHRRLPFAFIIGVVNHRSLPDTTSRS
Nucleotide Sequence	CTGGTAACTGGGATTGTCAATCATAGGAGGCTTCCATTTGCCTTTATAATTGGGGTTGTCAATCACAGGTCGCTGCCAGACACCACATCCAGGAGCTGA

CircID	chr5:179709873\|179720560
ORF Type	ORF2
Protein Length	60
Nucleotide Length	180
Protein Sequence	MCFLISKIGLQICIWPLSMFFFIDTRFGVFVSEDEVQFIVLSTFIWTKHNRIRGLVMELI
Nucleotide Sequence	ATGTGTTTTCTTATCAGTAAAATAGGTCTTCAGATCTGCATCTGGCCTCTTAGCATGTTTTTCTTCATAGATACCCGTTTTGGGGTTTTTGTGTCGGAAGATGAAGTGCAGTTTATAGTCCTCTCCACATTTATCTGGACCAAACATAATCGTATAAGGGGTCTTGTCATGGAACTGATC

CircID	chr5:179709873\|179720560
ORF Type	ORF3
Protein Length	84
Nucleotide Length	255
Protein Sequence	MFGPDKCGEDYKLHFIFRHKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLRMKTWMENGRLLRLPTLDVSQLLDVVSGSDL
Nucleotide Sequence	ATGTTTGGTCCAGATAAATGTGGAGAGGACTATAAACTGCACTTCATCTTCCGACACAAAAACCCCAAAACGGGTATCTATGAAGAAAAACATGCTAAGAGGCCAGATGCAGATCTGAAGACCTATTTTACTGATAAGAAAACACATCTTTACACACTAAGGATGAAGACATGGATGGAGAATGGGAGGCTCCTCAGATTGCCAACCCTAGATGTGAGTCAGCTCCTGGATGTGGTGTCTGGCAGCGACCTGTGA

CircID	chr5:179709873\|179720560
ORF Type	ORF4
Protein Length	46
Nucleotide Length	141
Protein Sequence	MTRPLIRLCLVQINVERTINCTSSSDTKTPKRVSMKKNMLRGQMQI
Nucleotide Sequence	ATGACAAGACCCCTTATACGATTATGTTTGGTCCAGATAAATGTGGAGAGGACTATAAACTGCACTTCATCTTCCGACACAAAAACCCCAAAACGGGTATCTATGAAGAAAAACATGCTAAGAGGCCAGATGCAGATCTGA

CircID	chr5:179709873\|179720560
ORF Type	ORF5
Protein Length	49
Nucleotide Length	147
Protein Sequence	MDGEWEAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKPPMIDNPSYQ
Nucleotide Sequence	ATGGATGGAGAATGGGAGGCTCCTCAGATTGCCAACCCTAGATGTGAGTCAGCTCCTGGATGTGGTGTCTGGCAGCGACCTGTGATTGACAACCCCAATTATAAAGGCAAATGGAAGCCTCCTATGATTGACAATCCCAGTTACCAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:179709873\|179720560	U2AF2	15	9	13
chr5:179709873\|179720560	MOV10	2	0	3
chr5:179709873\|179720560	PRPF8	2	3	4
chr5:179709873\|179720560	TNRC6A	0	0	3
chr5:179709873\|179720560	CAPRIN1	1	0	0
chr5:179709873\|179720560	TROVE2	0	0	1
chr5:179709873\|179720560	GNL3	1	0	3
chr5:179709873\|179720560	DGCR8	0	0	10
chr5:179709873\|179720560	MBNL1	0	0	1
chr5:179709873\|179720560	PTBP1	2	0	10
chr5:179709873\|179720560	METTL14	0	0	1
chr5:179709873\|179720560	DHX9	0	1	0
chr5:179709873\|179720560	DDX3X	2	0	7
chr5:179709873\|179720560	LARP7	0	0	5
chr5:179709873\|179720560	ACIN1	7	0	15
chr5:179709873\|179720560	RANGAP1	0	0	3
chr5:179709873\|179720560	FXR1	2	0	4
chr5:179709873\|179720560	FXR2	0	0	10
chr5:179709873\|179720560	GTF2F1	2	0	1
chr5:179709873\|179720560	RBM47	2	1	4
chr5:179709873\|179720560	SLTM	0	0	8
chr5:179709873\|179720560	EIF4G2	0	0	3
chr5:179709873\|179720560	DDX42	0	0	4
chr5:179709873\|179720560	CSTF2T	0	0	7
chr5:179709873\|179720560	VIM	0	0	2
chr5:179709873\|179720560	TIAL1	1	0	1
chr5:179709873\|179720560	YWHAG	0	0	3
chr5:179709873\|179720560	SLBP	0	0	1
chr5:179709873\|179720560	ELAVL1	9	3	4
chr5:179709873\|179720560	KHDRBS1	0	0	1
chr5:179709873\|179720560	RC3H1	1	0	0
chr5:179709873\|179720560	YTHDF1	0	0	1
chr5:179709873\|179720560	SRSF7	1	0	6
chr5:179709873\|179720560	SRSF1	1	0	30
chr5:179709873\|179720560	SRSF3	0	0	1
chr5:179709873\|179720560	U2AF1	0	0	8
chr5:179709873\|179720560	KHSRP	3	0	0
chr5:179709873\|179720560	SRSF9	0	0	6
chr5:179709873\|179720560	DDX54	0	0	18
chr5:179709873\|179720560	SF3A3	1	0	4
chr5:179709873\|179720560	ZNF184	0	0	8
chr5:179709873\|179720560	XRN2	0	0	2
chr5:179709873\|179720560	LIN28B	0	0	7
chr5:179709873\|179720560	LIN28A	0	0	6
chr5:179709873\|179720560	BCCIP	0	0	3
chr5:179709873\|179720560	RBFOX2	0	0	3
chr5:179709873\|179720560	SAFB2	0	0	5
chr5:179709873\|179720560	RBM27	0	0	2
chr5:179709873\|179720560	RBM22	0	1	0
chr5:179709873\|179720560	HNRNPK	1	0	0
chr5:179709873\|179720560	AIFM1	0	0	2
chr5:179709873\|179720560	AGO1	0	0	2
chr5:179709873\|179720560	EIF4A3	4	4	8
chr5:179709873\|179720560	AGO2	2	0	20
chr5:179709873\|179720560	CNBP	1	0	3
chr5:179709873\|179720560	UPF1	3	1	6
chr5:179709873\|179720560	FUS	2	0	2
chr5:179709873\|179720560	HNRNPU	0	0	5
chr5:179709873\|179720560	RBM10	0	0	1
chr5:179709873\|179720560	HNRNPM	0	0	1
chr5:179709873\|179720560	HNRNPC	1	8	0
chr5:179709873\|179720560	LARP4B	0	0	1
chr5:179709873\|179720560	SMNDC1	4	0	8
chr5:179709873\|179720560	AUH	0	0	4
chr5:179709873\|179720560	HNRNPA1	0	0	1
chr5:179709873\|179720560	SND1	3	0	12
chr5:179709873\|179720560	IGF2BP1	1	0	7
chr5:179709873\|179720560	IGF2BP3	1	0	7
chr5:179709873\|179720560	IGF2BP2	4	1	23
chr5:179709873\|179720560	HNRNPUL1	0	0	3
chr5:179709873\|179720560	TARDBP	0	1	6
chr5:179709873\|179720560	YTHDC1	0	0	2
chr5:179709873\|179720560	BUD13	0	0	6
chr5:179709873\|179720560	RTCB	0	0	1
chr5:179709873\|179720560	FBL	1	1	8
chr5:179709873\|179720560	RBM6	0	1	2
chr5:179709873\|179720560	RBM5	1	0	1
chr5:179709873\|179720560	NUMA1	0	0	5
chr5:179709873\|179720560	FMR1	1	0	20
chr5:179709873\|179720560	CPSF6	0	0	4
chr5:179709873\|179720560	NOP58	2	0	8
chr5:179709873\|179720560	NOP56	0	1	2
chr5:179709873\|179720560	HNRNPA2B1	0	0	11
chr5:179709873\|179720560	TRA2A	0	0	9
chr5:179709873\|179720560	ZC3H7B	1	0	1
chr5:179709873\|179720560	SBDS	0	1	0
chr5:179709873\|179720560	MSI2	0	0	7
chr5:179709873\|179720560	NPM1	1	0	1

CircRNA Information