CircRNA Information

General Information
circRNA Basic Information
CircID chr5:179798028|179798263
Strand -
CircType exon
Host Gene ENSG00000161013.15;
Algorism CIRI2;
Sequence CCTCAGAAGCCCGCAGCTTAGTCGGCCTTTTTCAGGAAGATCTGGAAGAGCCGGACCCAGGGTCAGCAGGGCCTCTGAGCTCCGCCAGGGTCTCCCTGGCTGCTCCCCGTGCCTGGCCTGGCCCTGCCCAGCCTCACCTCGCTCAGAATCACCCACACAGGGGAGTCCGTCTGGATCGAGAGGCGCAGTGCTTCCAGAGGGCCGAAGGCTGGGTCCACCTCTCCCTCTGCCACTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:179798028|179798263 hsa-miR-370-5p 0 0 1
chr5:179798028|179798263 hsa-miR-370-3p 0 0 1
chr5:179798028|179798263 hsa-miR-504-5p 0 0 1
chr5:179798028|179798263 hsa-miR-504-3p 0 0 1
chr5:179798028|179798263 hsa-miR-564 0 1 1
chr5:179798028|179798263 hsa-miR-612 0 1 1
chr5:179798028|179798263 hsa-miR-939-5p 0 0 1
chr5:179798028|179798263 hsa-miR-939-3p 0 0 1
chr5:179798028|179798263 hsa-miR-1236-5p 0 0 1
chr5:179798028|179798263 hsa-miR-1236-3p 0 0 1
chr5:179798028|179798263 hsa-miR-1200 0 0 1
chr5:179798028|179798263 hsa-miR-1291 0 1 1
chr5:179798028|179798263 hsa-miR-1299 0 1 1
chr5:179798028|179798263 hsa-miR-1262 0 1 1
chr5:179798028|179798263 hsa-miR-671-5p 0 0 1
chr5:179798028|179798263 hsa-miR-485-5p 0 1 1
chr5:179798028|179798263 hsa-miR-525-5p 0 0 1
chr5:179798028|179798263 hsa-miR-331-3p 0 0 1
chr5:179798028|179798263 hsa-miR-875-3p 0 0 1
chr5:179798028|179798263 hsa-miR-628-5p 0 0 1
chr5:179798028|179798263 hsa-miR-1207-5p 1 1 1
chr5:179798028|179798263 hsa-miR-520a-5p 0 0 1
chr5:179798028|179798263 hsa-miR-644 0 0 1
chr5:179798028|179798263 hsa-miR-1285 0 0 1
chr5:179798028|179798263 hsa-miR-147 0 0 1
chr5:179798028|179798263 hsa-miR-147a 0 1 0
chr5:179798028|179798263 hsa-miR-608 1 1 0
chr5:179798028|179798263 hsa-miR-658 1 0 0
chr5:179798028|179798263 hsa-miR-1278 0 1 0
chr5:179798028|179798263 hsa-miR-3142 0 1 0
chr5:179798028|179798263 hsa-miR-4303 0 1 0
chr5:179798028|179798263 hsa-miR-4316 0 1 0
chr5:179798028|179798263 hsa-miR-4269 0 1 0
chr5:179798028|179798263 hsa-miR-4270 0 1 0
chr5:179798028|179798263 hsa-miR-4292 0 1 0
chr5:179798028|179798263 hsa-miR-4486 0 1 0
chr5:179798028|179798263 hsa-miR-4498 0 1 0
chr5:179798028|179798263 hsa-miR-4505 0 1 0
chr5:179798028|179798263 hsa-miR-4507 1 0 0
chr5:179798028|179798263 hsa-miR-4510 0 1 0
chr5:179798028|179798263 hsa-miR-1587 1 0 0
chr5:179798028|179798263 hsa-miR-4673 0 1 0
chr5:179798028|179798263 hsa-miR-4730 0 1 0
chr5:179798028|179798263 hsa-miR-4734 0 1 0
chr5:179798028|179798263 hsa-miR-4739 1 0 0
chr5:179798028|179798263 hsa-miR-5787 1 1 0
chr5:179798028|179798263 hsa-miR-6081 0 1 0
chr5:179798028|179798263 hsa-miR-6086 0 1 0
chr5:179798028|179798263 hsa-miR-6127 0 1 0
chr5:179798028|179798263 hsa-miR-6129 0 1 0
chr5:179798028|179798263 hsa-miR-6132 0 1 0
chr5:179798028|179798263 hsa-miR-6133 0 1 0
chr5:179798028|179798263 hsa-miR-6860 1 1 0
chr5:179798028|179798263 hsa-miR-7150 1 1 0
chr5:179798028|179798263 hsa-miR-9718 0 1 0
chr5:179798028|179798263 hsa-miR-12127 0 1 0
chr5:179798028|179798263 hsa-miR-6765-5p 1 0 0
chr5:179798028|179798263 hsa-miR-1972 0 1 0
chr5:179798028|179798263 hsa-miR-3622a-5p 0 1 0
chr5:179798028|179798263 hsa-miR-6089 1 0 0
chr5:179798028|179798263 hsa-miR-4755-3p 0 1 0
chr5:179798028|179798263 hsa-miR-6849-3p 0 1 0
chr5:179798028|179798263 hsa-miR-6742-5p 1 0 0
chr5:179798028|179798263 hsa-miR-6793-5p 1 0 0
chr5:179798028|179798263 hsa-miR-2467-5p 0 1 0
chr5:179798028|179798263 hsa-miR-6798-5p 1 1 0
chr5:179798028|179798263 hsa-miR-6760-5p 0 1 0
chr5:179798028|179798263 hsa-miR-2467-3p 1 1 0
chr5:179798028|179798263 hsa-miR-5008-5p 0 1 0
chr5:179798028|179798263 hsa-miR-6786-5p 1 0 0
chr5:179798028|179798263 hsa-miR-1229-5p 1 0 0
chr5:179798028|179798263 hsa-miR-4640-5p 1 1 0
chr5:179798028|179798263 hsa-miR-7161-3p 0 1 0
chr5:179798028|179798263 hsa-miR-1228-5p 0 1 0
chr5:179798028|179798263 hsa-miR-146b-3p 0 1 0
chr5:179798028|179798263 hsa-miR-6895-5p 0 1 0
chr5:179798028|179798263 hsa-miR-5000-5p 0 1 0
chr5:179798028|179798263 hsa-miR-3614-3p 0 1 0
chr5:179798028|179798263 hsa-miR-7113-5p 0 1 0
chr5:179798028|179798263 hsa-miR-518c-5p 0 1 0
chr5:179798028|179798263 hsa-miR-3670 0 1 0
chr5:179798028|179798263 hsa-miR-4763-3p 1 1 0
chr5:179798028|179798263 hsa-miR-6787-5p 0 1 0
chr5:179798028|179798263 hsa-miR-6865-5p 1 0 0
chr5:179798028|179798263 hsa-miR-1343-5p 1 1 0
chr5:179798028|179798263 hsa-miR-6743-5p 1 0 0
chr5:179798028|179798263 hsa-miR-6754-5p 0 1 0
chr5:179798028|179798263 hsa-miR-6803-5p 1 0 0
chr5:179798028|179798263 hsa-miR-10401-5p 1 0 0
chr5:179798028|179798263 hsa-miR-1249-5p 1 1 0
chr5:179798028|179798263 hsa-miR-6722-3p 1 1 0
chr5:179798028|179798263 hsa-miR-6763-5p 1 1 0
chr5:179798028|179798263 hsa-miR-6779-5p 1 0 0
chr5:179798028|179798263 hsa-miR-6808-5p 1 0 0
chr5:179798028|179798263 hsa-miR-7111-5p 1 0 0
chr5:179798028|179798263 hsa-miR-3620-5p 1 1 0
chr5:179798028|179798263 hsa-miR-5189-5p 0 1 0
chr5:179798028|179798263 hsa-miR-6836-5p 1 1 0
chr5:179798028|179798263 hsa-miR-10396a-5p 0 1 0
chr5:179798028|179798263 hsa-miR-10396b-5p 1 1 0
chr5:179798028|179798263 hsa-miR-328-5p 1 1 0
chr5:179798028|179798263 hsa-miR-4701-3p 1 1 0
chr5:179798028|179798263 hsa-miR-4726-5p 0 1 0
chr5:179798028|179798263 hsa-miR-4749-5p 1 1 0
chr5:179798028|179798263 hsa-miR-6729-5p 1 1 0
chr5:179798028|179798263 hsa-miR-6777-5p 0 1 0
chr5:179798028|179798263 hsa-miR-6848-5p 1 0 0
chr5:179798028|179798263 hsa-miR-6889-5p 0 1 0
chr5:179798028|179798263 hsa-miR-3187-5p 0 1 0
chr5:179798028|179798263 hsa-miR-4758-5p 1 0 0
chr5:179798028|179798263 hsa-miR-6791-5p 0 1 0
chr5:179798028|179798263 hsa-miR-10392-3p 1 0 0
chr5:179798028|179798263 hsa-miR-6884-5p 0 1 0
chr5:179798028|179798263 hsa-miR-330-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr5:179798028|179798263
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MLPVPGLALPSLTSLRITHTGESVWIERRSASRGPKAGSTSPSAT
Nucleotide Sequence CTGCTCCCCGTGCCTGGCCTGGCCCTGCCCAGCCTCACCTCGCTCAGAATCACCCACACAGGGGAGTCCGTCTGGATCGAGAGGCGCAGTGCTTCCAGAGGGCCGAAGGCTGGGTCCACCTCTCCCTCTGCCACT

CircID chr5:179798028|179798263
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence MAWPCPASPRSESPTQGSPSGSRGAVLPEGRRLGPPLPLPL
Nucleotide Sequence CTGGCCTGGCCCTGCCCAGCCTCACCTCGCTCAGAATCACCCACACAGGGGAGTCCGTCTGGATCGAGAGGCGCAGTGCTTCCAGAGGGCCGAAGGCTGGGTCCACCTCTCCCTCTGCCACTC

CircID chr5:179798028|179798263
ORF Type ORF3
Protein Length 65
Nucleotide Length 195
Protein Sequence MEEPDPGSAGPLSSARVSLAAPRAWPGPAQPHLAQNHPHRGVRLDREAQCFQRAEGWVHLSLCHS
Nucleotide Sequence CTGGAAGAGCCGGACCCAGGGTCAGCAGGGCCTCTGAGCTCCGCCAGGGTCTCCCTGGCTGCTCCCCGTGCCTGGCCTGGCCCTGCCCAGCCTCACCTCGCTCAGAATCACCCACACAGGGGAGTCCGTCTGGATCGAGAGGCGCAGTGCTTCCAGAGGGCCGAAGGCTGGGTCCACCTCTCCCTCTGCCACTCC

CircID chr5:179798028|179798263
ORF Type ORF4
Protein Length 44
Nucleotide Length 135
Protein Sequence MEALRLSIQTDSPVWVILSEVRLGRARPGTGSSQGDPGGAQRPC
Nucleotide Sequence CTGGAAGCACTGCGCCTCTCGATCCAGACGGACTCCCCTGTGTGGGTGATTCTGAGCGAGGTGAGGCTGGGCAGGGCCAGGCCAGGCACGGGGAGCAGCCAGGGAGACCCTGGCGGAGCTCAGAGGCCCTGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites