CircRNA Information

General Information
circRNA Basic Information
CircID chr5:179862537|179862703
Strand +
CircType exon
Host Gene ENSG00000197226.11;
Algorism CIRI2;
Sequence CACTGCTTAGGCCTCCCAACTTCTCCCCAGGCCAAGTATGGGGCCCTGGCTGTGTTCTGGAAGTTCAAGACACTTAGTCCTCCACAGTGGGTGGAAGAGTGCAAGGTCTGCCAGGTCAGATGGAGACGCAGAACCTGCTGGTGCAAGCTGGGCAGGTCCTGACCAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:179862537|179862703 hsa-miR-214-5p 0 0 1
chr5:179862537|179862703 hsa-miR-214-3p 0 0 1
chr5:179862537|179862703 hsa-miR-136-5p 0 0 1
chr5:179862537|179862703 hsa-miR-136-3p 0 0 1
chr5:179862537|179862703 hsa-miR-431-5p 0 0 1
chr5:179862537|179862703 hsa-miR-431-3p 0 0 1
chr5:179862537|179862703 hsa-miR-492 0 0 1
chr5:179862537|179862703 hsa-miR-595 0 0 1
chr5:179862537|179862703 hsa-miR-631 0 0 1
chr5:179862537|179862703 hsa-miR-634 0 0 1
chr5:179862537|179862703 hsa-miR-661 0 0 1
chr5:179862537|179862703 hsa-miR-657 0 0 1
chr5:179862537|179862703 hsa-miR-765 0 0 1
chr5:179862537|179862703 hsa-miR-890 0 0 1
chr5:179862537|179862703 hsa-miR-939-5p 0 0 1
chr5:179862537|179862703 hsa-miR-939-3p 0 0 1
chr5:179862537|179862703 hsa-miR-1226-5p 0 0 1
chr5:179862537|179862703 hsa-miR-1226-3p 0 0 1
chr5:179862537|179862703 hsa-miR-1236-5p 0 0 1
chr5:179862537|179862703 hsa-miR-1236-3p 0 0 1
chr5:179862537|179862703 hsa-miR-296-5p 0 0 1
chr5:179862537|179862703 hsa-miR-767-5p 0 0 1
chr5:179862537|179862703 hsa-miR-525-5p 0 0 1
chr5:179862537|179862703 hsa-miR-520a-5p 0 0 1
chr5:179862537|179862703 hsa-miR-762 1 0 0
chr5:179862537|179862703 hsa-miR-3131 1 0 0
chr5:179862537|179862703 hsa-miR-4256 0 1 0
chr5:179862537|179862703 hsa-miR-4289 0 1 0
chr5:179862537|179862703 hsa-miR-3684 0 1 0
chr5:179862537|179862703 hsa-miR-3918 0 1 0
chr5:179862537|179862703 hsa-miR-4425 0 1 0
chr5:179862537|179862703 hsa-miR-3689c 0 1 0
chr5:179862537|179862703 hsa-miR-4739 1 0 0
chr5:179862537|179862703 hsa-miR-4759 0 1 0
chr5:179862537|179862703 hsa-miR-5703 0 1 0
chr5:179862537|179862703 hsa-miR-6086 1 0 0
chr5:179862537|179862703 hsa-miR-7703 0 1 0
chr5:179862537|179862703 hsa-miR-8089 0 1 0
chr5:179862537|179862703 hsa-miR-152-5p 0 1 0
chr5:179862537|179862703 hsa-miR-3150a-3p 0 1 0
chr5:179862537|179862703 hsa-miR-6894-5p 1 0 0
chr5:179862537|179862703 hsa-miR-7114-5p 0 1 0
chr5:179862537|179862703 hsa-miR-3192-5p 0 1 0
chr5:179862537|179862703 hsa-miR-6880-5p 1 0 0
chr5:179862537|179862703 hsa-miR-7847-3p 0 1 0
chr5:179862537|179862703 hsa-miR-6746-5p 1 0 0
chr5:179862537|179862703 hsa-miR-7154-3p 0 1 0
chr5:179862537|179862703 hsa-miR-3189-5p 1 0 0
chr5:179862537|179862703 hsa-miR-6841-3p 0 1 0
chr5:179862537|179862703 hsa-miR-3180-3p 1 0 0
chr5:179862537|179862703 hsa-miR-6760-5p 0 1 0
chr5:179862537|179862703 hsa-miR-6850-5p 1 0 0
chr5:179862537|179862703 hsa-miR-7161-3p 0 1 0
chr5:179862537|179862703 hsa-miR-6878-5p 0 1 0
chr5:179862537|179862703 hsa-miR-7160-3p 0 1 0
chr5:179862537|179862703 hsa-miR-887-5p 0 1 0
chr5:179862537|179862703 hsa-miR-6720-3p 1 0 0
chr5:179862537|179862703 hsa-miR-3180-5p 0 1 0
chr5:179862537|179862703 hsa-miR-3200-3p 0 1 0
chr5:179862537|179862703 hsa-miR-589-3p 0 1 0
chr5:179862537|179862703 hsa-miR-221-5p 0 1 0
chr5:179862537|179862703 hsa-miR-1273h-5p 0 1 0
chr5:179862537|179862703 hsa-miR-3689b-3p 0 1 0
chr5:179862537|179862703 hsa-miR-6812-5p 1 0 0
chr5:179862537|179862703 hsa-miR-7107-5p 1 1 0
chr5:179862537|179862703 hsa-miR-6763-5p 0 1 0
chr5:179862537|179862703 hsa-miR-3689a-3p 0 1 0
chr5:179862537|179862703 hsa-miR-4685-5p 1 0 0
chr5:179862537|179862703 hsa-miR-6795-5p 1 0 0
chr5:179862537|179862703 hsa-miR-6887-5p 1 0 0
chr5:179862537|179862703 hsa-miR-4667-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr5:179862537|179862703
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence MAVFWKFKTLSPPQWVEECKVCQVRWRRRTCWCKLGRS
Nucleotide Sequence CTGGCTGTGTTCTGGAAGTTCAAGACACTTAGTCCTCCACAGTGGGTGGAAGAGTGCAAGGTCTGCCAGGTCAGATGGAGACGCAGAACCTGCTGGTGCAAGCTGGGCAGGTCCTGA

CircID chr5:179862537|179862703
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MGPWLCSGSSRHLVLHSGWKSARSARSDGDAEPAGASWAGPDQ
Nucleotide Sequence ATGGGGCCCTGGCTGTGTTCTGGAAGTTCAAGACACTTAGTCCTCCACAGTGGGTGGAAGAGTGCAAGGTCTGCCAGGTCAGATGGAGACGCAGAACCTGCTGGTGCAAGCTGGGCAGGTCCTGACCAA

CircID chr5:179862537|179862703
ORF Type ORF3
Protein Length 51
Nucleotide Length 153
Protein Sequence MPSLHQQVLRLHLTWQTLHSSTHCGGLSVLNFQNTARAPYLAWGEVGRPKQ
Nucleotide Sequence CTGCCCAGCTTGCACCAGCAGGTTCTGCGTCTCCATCTGACCTGGCAGACCTTGCACTCTTCCACCCACTGTGGAGGACTAAGTGTCTTGAACTTCCAGAACACAGCCAGGGCCCCATACTTGGCCTGGGGAGAAGTTGGGAGGCCTAAGCAG

CircID chr5:179862537|179862703
ORF Type ORF4
Protein Length 35
Nucleotide Length 108
Protein Sequence MADLALFHPLWRTKCLELPEHSQGPILGLGRSWEA
Nucleotide Sequence CTGGCAGACCTTGCACTCTTCCACCCACTGTGGAGGACTAAGTGTCTTGAACTTCCAGAACACAGCCAGGGCCCCATACTTGGCCTGGGGAGAAGTTGGGAGGCCTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites