CircNet

General Information

circRNA Basic Information

CircID	chr5:180269280\|180287067
Strand	-
CircType	exon
Host Gene	ENSG00000050748.17;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAATGTTATATGCATGGAGTTATACAGGATGTGACTTTTTGAGATTGGCTTTTTTCGTTGACTATCCTGCCCCTGAGATCCACCCAAGTTGTGGGATCTGAAACTTGCCCACCCTTCGGGATATTGCAGGACGCTGCATCATGAGCGACAGTAAATGTGACAGTCAGTTTTATAGTGTGCAAGTGGCAGACTCAACCTTCACTGTCCTAAAACGTTACCAGCAGCTGAAACCAATTGGCTCTGGGGCCCAAGGGATTGTTTGGCGCCATCATTGCAGTGCCTTGCCATTCATTGGCAGGATGAGGCCAGTCAGTGTCATTGTCACTCCATGGATTAACCAGGAAGGGATGCTGTGTGAGGGGTTGGGCTGGCCATCTCTTCCTTGGTGTCTCACTTCAACTGTGTGTCCAGCCCAGAACGTCAGAATCGTTAGTCTGACCCTGAACGTTAGTCTCTTGCATGGTAAGACGGTCAGCCGCCGCAGCATCACGGGCCAGCTCAAGTGCTGCATTTGATACAGTTCTTGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTCCTTTTCAGAACCAAACTCATGCAAAGAGAGCTTATCGTGAACTTGTCCTCTTAAAATGTGTCAATCATAAAAAT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:180269280\|180287067	hsa-miR-210-5p	0	1	1
chr5:180269280\|180287067	hsa-miR-20a-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:180269280\|180287067
ORF Type	ORF1
Protein Length	125
Nucleotide Length	375
Protein Sequence	MSDSKCDSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVWRHHCSALPFIGRMRPVSVIVTPWINQEGMLCEGLGWPSLPWCLTSTVCPAQNVRIVSLTLNVSLLHGKTVSRRSITGQLKCCI*
Nucleotide Sequence	ATGAGCGACAGTAAATGTGACAGTCAGTTTTATAGTGTGCAAGTGGCAGACTCAACCTTCACTGTCCTAAAACGTTACCAGCAGCTGAAACCAATTGGCTCTGGGGCCCAAGGGATTGTTTGGCGCCATCATTGCAGTGCCTTGCCATTCATTGGCAGGATGAGGCCAGTCAGTGTCATTGTCACTCCATGGATTAACCAGGAAGGGATGCTGTGTGAGGGGTTGGGCTGGCCATCTCTTCCTTGGTGTCTCACTTCAACTGTGTGTCCAGCCCAGAACGTCAGAATCGTTAGTCTGACCCTGAACGTTAGTCTCTTGCATGGTAAGACGGTCAGCCGCCGCAGCATCACGGGCCAGCTCAAGTGCTGCATTTGA

CircID	chr5:180269280\|180287067
ORF Type	ORF2
Protein Length	81
Nucleotide Length	243
Protein Sequence	MQHLSWPVMLRRLTVLPCKRLTFRVRLTILTFWAGHTVEVRHQGRDGQPNPSHSIPSWLIHGVTMTLTGLILPMNGKALQ*
Nucleotide Sequence	ATGCAGCACTTGAGCTGGCCCGTGATGCTGCGGCGGCTGACCGTCTTACCATGCAAGAGACTAACGTTCAGGGTCAGACTAACGATTCTGACGTTCTGGGCTGGACACACAGTTGAAGTGAGACACCAAGGAAGAGATGGCCAGCCCAACCCCTCACACAGCATCCCTTCCTGGTTAATCCATGGAGTGACAATGACACTGACTGGCCTCATCCTGCCAATGAATGGCAAGGCACTGCAATGA

CircID	chr5:180269280\|180287067
ORF Type	ORF3
Protein Length	58
Nucleotide Length	174
Protein Sequence	MVRRSAAAASRASSSAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKN
Nucleotide Sequence	ATGGTAAGACGGTCAGCCGCCGCAGCATCACGGGCCAGCTCAAGTGCTGCATTTGATACAGTTCTTGGGATAAATGTTGCAGTCAAGAAACTAAGCCGTCCTTTTCAGAACCAAACTCATGCAAAGAGAGCTTATCGTGAACTTGTCCTCTTAAAATGTGTCAATCATAAAAAT

CircID	chr5:180269280\|180287067
ORF Type	ORF4
Protein Length	33
Nucleotide Length	99
Protein Sequence	MLYAWSYTGCDFLRLAFFVDYPAPEIHPSCGI*
Nucleotide Sequence	ATGTTATATGCATGGAGTTATACAGGATGTGACTTTTTGAGATTGGCTTTTTTCGTTGACTATCCTGCCCCTGAGATCCACCCAAGTTGTGGGATCTGA

CircID	chr5:180269280\|180287067
ORF Type	ORF5
Protein Length	30
Nucleotide Length	90
Protein Sequence	MARHCNDGAKQSLGPQSQLVSAAGNVLGQ*
Nucleotide Sequence	ATGGCAAGGCACTGCAATGATGGCGCCAAACAATCCCTTGGGCCCCAGAGCCAATTGGTTTCAGCTGCTGGTAACGTTTTAGGACAGTGA

CircID	chr5:180269280\|180287067
ORF Type	ORF6
Protein Length	59
Nucleotide Length	177
Protein Sequence	LHTIKLTVTFTVAHDAASCNIPKGGQVSDPTTWVDLRGRIVNEKSQSQKVTSCITPCI*
Nucleotide Sequence	TTGCACACTATAAAACTGACTGTCACATTTACTGTCGCTCATGATGCAGCGTCCTGCAATATCCCGAAGGGTGGGCAAGTTTCAGATCCCACAACTTGGGTGGATCTCAGGGGCAGGATAGTCAACGAAAAAAGCCAATCTCAAAAAGTCACATCCTGTATAACTCCATGCATATAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:180269280\|180287067	GTF2F1	1	0	0
chr5:180269280\|180287067	U2AF2	18	0	5
chr5:180269280\|180287067	MOV10	1	1	5
chr5:180269280\|180287067	ELAVL1	1	0	3
chr5:180269280\|180287067	NUMA1	1	0	0
chr5:180269280\|180287067	FAM120A	0	0	1
chr5:180269280\|180287067	CNBP	1	0	1
chr5:180269280\|180287067	FMR1	0	0	4
chr5:180269280\|180287067	CPSF1	1	0	0
chr5:180269280\|180287067	FUS	0	2	1
chr5:180269280\|180287067	GNL3	0	0	1
chr5:180269280\|180287067	SRSF1	0	0	1
chr5:180269280\|180287067	NOP58	1	1	1
chr5:180269280\|180287067	SRSF3	1	0	0
chr5:180269280\|180287067	U2AF1	0	0	2
chr5:180269280\|180287067	NOP56	3	1	2
chr5:180269280\|180287067	SRSF9	0	0	1
chr5:180269280\|180287067	DDX54	0	0	10
chr5:180269280\|180287067	LSM11	1	0	0
chr5:180269280\|180287067	ELAVL3	0	1	0
chr5:180269280\|180287067	HNRNPK	3	0	0
chr5:180269280\|180287067	HNRNPL	1	0	0
chr5:180269280\|180287067	HNRNPM	0	0	2
chr5:180269280\|180287067	SF3A3	1	0	1
chr5:180269280\|180287067	PTBP1	1	0	0
chr5:180269280\|180287067	HNRNPC	10	1	4
chr5:180269280\|180287067	DHX9	2	0	0
chr5:180269280\|180287067	HNRNPA1	1	0	0
chr5:180269280\|180287067	DDX3X	0	0	4
chr5:180269280\|180287067	KHSRP	0	1	0
chr5:180269280\|180287067	ACIN1	0	0	1
chr5:180269280\|180287067	LIN28B	2	0	5
chr5:180269280\|180287067	RANGAP1	0	0	1
chr5:180269280\|180287067	FXR2	0	0	1
chr5:180269280\|180287067	IGF2BP1	0	0	3
chr5:180269280\|180287067	DICER1	1	0	0
chr5:180269280\|180287067	IGF2BP3	0	0	1
chr5:180269280\|180287067	IGF2BP2	1	1	7
chr5:180269280\|180287067	NPM1	0	0	1
chr5:180269280\|180287067	TARDBP	0	0	1
chr5:180269280\|180287067	STAU1	3	0	0
chr5:180269280\|180287067	BUD13	0	0	1
chr5:180269280\|180287067	RBFOX2	1	0	0
chr5:180269280\|180287067	PRPF8	0	0	1
chr5:180269280\|180287067	RTCB	0	0	1
chr5:180269280\|180287067	CSTF2T	2	0	2
chr5:180269280\|180287067	TIA1	1	0	0
chr5:180269280\|180287067	TROVE2	2	0	0
chr5:180269280\|180287067	AGO2	1	0	1
chr5:180269280\|180287067	EIF4A3	1	0	7
chr5:180269280\|180287067	FBL	0	1	3

CircRNA Information