CircRNA Information

General Information
circRNA Basic Information
CircID chr5:181237609|181238239
Strand -
CircType exon
Host Gene ENSG00000204628.11;
Algorism find_circ;CIRI2;DCC;
Sequence GATGGCCAGGCCATGTTATGGGATCTCAACGAAGGCAAACACCTTTACACGCTAGATGGTGGGGACATCATCAACGCCCTGTGCTTCAGCCCTAACCGCTACTGGCTGTGTGCTGCCACAGGCCCCAGCATCAAGATCTGGGATTTAGAGGGAAAGATCATTGTAGATGAACTGAAGCAAGAAGTTATCAGTACCAGCAGCAAGGCAGAACCACCCCAGTGCACCTCCCTGGCCTGGTCTGCTGATGGCCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:181237609|181238239 hsa-miR-15a-5p 0 0 1
chr5:181237609|181238239 hsa-miR-15a-3p 0 0 1
chr5:181237609|181238239 hsa-miR-148a-5p 0 0 1
chr5:181237609|181238239 hsa-miR-148a-3p 0 0 1
chr5:181237609|181238239 hsa-miR-15b-5p 0 0 1
chr5:181237609|181238239 hsa-miR-15b-3p 0 0 1
chr5:181237609|181238239 hsa-miR-152-5p 0 0 1
chr5:181237609|181238239 hsa-miR-152-3p 0 0 1
chr5:181237609|181238239 hsa-miR-195-5p 0 0 1
chr5:181237609|181238239 hsa-miR-195-3p 0 0 1
chr5:181237609|181238239 hsa-miR-148b-5p 0 0 1
chr5:181237609|181238239 hsa-miR-148b-3p 0 0 1
chr5:181237609|181238239 hsa-miR-424-5p 0 0 1
chr5:181237609|181238239 hsa-miR-424-3p 0 0 1
chr5:181237609|181238239 hsa-miR-193b-5p 0 0 1
chr5:181237609|181238239 hsa-miR-193b-3p 0 0 1
chr5:181237609|181238239 hsa-miR-497-5p 0 0 1
chr5:181237609|181238239 hsa-miR-497-3p 0 0 1
chr5:181237609|181238239 hsa-miR-634 0 0 1
chr5:181237609|181238239 hsa-miR-636 0 0 1
chr5:181237609|181238239 hsa-miR-638 1 0 1
chr5:181237609|181238239 hsa-miR-892b 0 0 1
chr5:181237609|181238239 hsa-miR-541-5p 0 0 1
chr5:181237609|181238239 hsa-miR-541-3p 0 0 1
chr5:181237609|181238239 hsa-miR-877-5p 0 0 1
chr5:181237609|181238239 hsa-miR-877-3p 0 0 1
chr5:181237609|181238239 hsa-miR-1303 0 0 1
chr5:181237609|181238239 hsa-miR-1825 0 1 1
chr5:181237609|181238239 hsa-miR-92a-2-5p 0 1 1
chr5:181237609|181238239 hsa-miR-218-5p 0 1 1
chr5:181237609|181238239 hsa-miR-491-5p 0 1 1
chr5:181237609|181238239 hsa-miR-361-5p 0 0 1
chr5:181237609|181238239 hsa-miR-146b-3p 0 1 1
chr5:181237609|181238239 hsa-miR-654-5p 0 0 1
chr5:181237609|181238239 hsa-miR-338-3p 0 1 1
chr5:181237609|181238239 hsa-miR-769-3p 0 1 1
chr5:181237609|181238239 hsa-miR-450b-3p 0 0 1
chr5:181237609|181238239 hsa-miR-193a-3p 0 0 1
chr5:181237609|181238239 hsa-miR-16 0 0 1
chr5:181237609|181238239 hsa-miR-218 0 0 1
chr5:181237609|181238239 hsa-miR-601 1 0 0
chr5:181237609|181238239 hsa-miR-637 1 0 0
chr5:181237609|181238239 hsa-miR-940 1 0 0
chr5:181237609|181238239 hsa-miR-663b 1 0 0
chr5:181237609|181238239 hsa-miR-3176 0 1 0
chr5:181237609|181238239 hsa-miR-3714 0 1 0
chr5:181237609|181238239 hsa-miR-4530 0 1 0
chr5:181237609|181238239 hsa-miR-3974 0 1 0
chr5:181237609|181238239 hsa-miR-3977 0 1 0
chr5:181237609|181238239 hsa-miR-4654 0 1 0
chr5:181237609|181238239 hsa-miR-6071 0 1 0
chr5:181237609|181238239 hsa-miR-7974 0 1 0
chr5:181237609|181238239 hsa-miR-8075 0 1 0
chr5:181237609|181238239 hsa-miR-12115 1 0 0
chr5:181237609|181238239 hsa-miR-6734-5p 1 0 0
chr5:181237609|181238239 hsa-miR-212-5p 0 1 0
chr5:181237609|181238239 hsa-miR-766-3p 1 0 0
chr5:181237609|181238239 hsa-miR-7851-3p 1 0 0
chr5:181237609|181238239 hsa-miR-3064-5p 0 1 0
chr5:181237609|181238239 hsa-miR-4755-3p 0 1 0
chr5:181237609|181238239 hsa-miR-874-5p 0 1 0
chr5:181237609|181238239 hsa-miR-770-5p 1 1 0
chr5:181237609|181238239 hsa-miR-3663-5p 0 1 0
chr5:181237609|181238239 hsa-miR-3156-5p 1 1 0
chr5:181237609|181238239 hsa-miR-6810-5p 0 1 0
chr5:181237609|181238239 hsa-miR-6852-5p 1 0 0
chr5:181237609|181238239 hsa-miR-4640-5p 1 0 0
chr5:181237609|181238239 hsa-miR-7113-3p 0 1 0
chr5:181237609|181238239 hsa-miR-6776-3p 0 1 0
chr5:181237609|181238239 hsa-miR-6828-5p 1 0 0
chr5:181237609|181238239 hsa-miR-4708-3p 1 1 0
chr5:181237609|181238239 hsa-miR-584-3p 1 0 0
chr5:181237609|181238239 hsa-miR-1914-5p 0 1 0
chr5:181237609|181238239 hsa-miR-624-5p 0 1 0
chr5:181237609|181238239 hsa-miR-18b-3p 0 1 0
chr5:181237609|181238239 hsa-miR-6775-5p 1 0 0
chr5:181237609|181238239 hsa-miR-1249-5p 1 0 0
chr5:181237609|181238239 hsa-miR-6780a-5p 1 0 0
chr5:181237609|181238239 hsa-miR-6797-5p 1 0 0
chr5:181237609|181238239 hsa-miR-4769-5p 0 1 0
chr5:181237609|181238239 hsa-miR-5008-3p 0 1 0
chr5:181237609|181238239 hsa-miR-6855-5p 1 1 0
chr5:181237609|181238239 hsa-miR-4646-5p 1 0 0
chr5:181237609|181238239 hsa-miR-4716-3p 1 0 0
chr5:181237609|181238239 hsa-miR-619-5p 0 1 0
chr5:181237609|181238239 hsa-miR-6504-5p 0 1 0
chr5:181237609|181238239 hsa-miR-6838-5p 1 1 0
chr5:181237609|181238239 hsa-miR-6737-3p 1 1 0
chr5:181237609|181238239 hsa-miR-3922-3p 0 1 0
chr5:181237609|181238239 hsa-miR-30c-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr5:181237609|181238239
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence LAISRPGQGGALGWFCLAAGTDNFLLQFIYNDLSL
Nucleotide Sequence CTGGCCATCAGCAGACCAGGCCAGGGAGGTGCACTGGGGTGGTTCTGCCTTGCTGCTGGTACTGATAACTTCTTGCTTCAGTTCATCTACAATGATCTTTCCCTCTAA

CircID chr5:181237609|181238239
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MLLVLITSCFSSSTMIFPSKSQILMLGPVAAHSQ
Nucleotide Sequence TTGCTGCTGGTACTGATAACTTCTTGCTTCAGTTCATCTACAATGATCTTTCCCTCTAAATCCCAGATCTTGATGCTGGGGCCTGTGGCAGCACACAGCCAGTAG

CircID chr5:181237609|181238239
ORF Type ORF3
Protein Length 80
Nucleotide Length 240
Protein Sequence MLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ
Nucleotide Sequence ATGTTATGGGATCTCAACGAAGGCAAACACCTTTACACGCTAGATGGTGGGGACATCATCAACGCCCTGTGCTTCAGCCCTAACCGCTACTGGCTGTGTGCTGCCACAGGCCCCAGCATCAAGATCTGGGATTTAGAGGGAAAGATCATTGTAGATGAACTGAAGCAAGAAGTTATCAGTACCAGCAGCAAGGCAGAACCACCCCAGTGCACCTCCCTGGCCTGGTCTGCTGATGGCCAG

CircID chr5:181237609|181238239
ORF Type ORF4
Protein Length 30
Nucleotide Length 93
Protein Sequence MVGTSSTPCASALTATGCVLPQAPASRSGI
Nucleotide Sequence ATGGTGGGGACATCATCAACGCCCTGTGCTTCAGCCCTAACCGCTACTGGCTGTGTGCTGCCACAGGCCCCAGCATCAAGATCTGGGATTTAG

CircID chr5:181237609|181238239
ORF Type ORF5
Protein Length 25
Nucleotide Length 78
Protein Sequence MGSQRRQTPLHARWWGHHQRPVLQP
Nucleotide Sequence ATGGGATCTCAACGAAGGCAAACACCTTTACACGCTAGATGGTGGGGACATCATCAACGCCCTGTGCTTCAGCCCTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr5:181237609|181238239 KHSRP 0 6 3
chr5:181237609|181238239 MOV10 7 12 6
chr5:181237609|181238239 NCBP3 0 0 1
chr5:181237609|181238239 FKBP4 0 1 2
chr5:181237609|181238239 PRPF8 8 9 7
chr5:181237609|181238239 SRSF10 1 0 0
chr5:181237609|181238239 TNRC6A 4 3 4
chr5:181237609|181238239 CAPRIN1 1 1 1
chr5:181237609|181238239 TROVE2 5 3 5
chr5:181237609|181238239 GNL3 6 2 4
chr5:181237609|181238239 DGCR8 8 4 9
chr5:181237609|181238239 PTBP1 2 2 4
chr5:181237609|181238239 DHX9 1 1 0
chr5:181237609|181238239 DDX3X 5 5 5
chr5:181237609|181238239 LARP7 1 1 3
chr5:181237609|181238239 ACIN1 4 9 6
chr5:181237609|181238239 RANGAP1 6 2 4
chr5:181237609|181238239 FXR1 4 4 4
chr5:181237609|181238239 FXR2 6 3 4
chr5:181237609|181238239 BUD13 6 5 5
chr5:181237609|181238239 GTF2F1 5 3 7
chr5:181237609|181238239 SLTM 6 6 6
chr5:181237609|181238239 EIF4G2 3 3 4
chr5:181237609|181238239 EIF4G1 0 2 2
chr5:181237609|181238239 DDX42 4 5 4
chr5:181237609|181238239 CSTF2T 8 5 9
chr5:181237609|181238239 VIM 2 1 2
chr5:181237609|181238239 RNF219 1 1 2
chr5:181237609|181238239 XRN2 4 4 4
chr5:181237609|181238239 SLBP 1 3 2
chr5:181237609|181238239 FUS 1 4 1
chr5:181237609|181238239 ELAVL3 1 0 0
chr5:181237609|181238239 KHDRBS1 4 3 4
chr5:181237609|181238239 YTHDF1 0 1 0
chr5:181237609|181238239 SRSF7 4 7 3
chr5:181237609|181238239 SRSF1 19 15 10
chr5:181237609|181238239 SRSF3 0 4 0
chr5:181237609|181238239 NONO 4 4 4
chr5:181237609|181238239 ADAR 3 0 0
chr5:181237609|181238239 U2AF2 27 36 5
chr5:181237609|181238239 SRSF9 8 4 3
chr5:181237609|181238239 DDX54 8 12 10
chr5:181237609|181238239 PCBP2 4 1 2
chr5:181237609|181238239 SF3A3 4 2 0
chr5:181237609|181238239 ZNF184 6 2 4
chr5:181237609|181238239 TIAL1 0 3 0
chr5:181237609|181238239 LIN28B 9 7 9
chr5:181237609|181238239 LIN28A 1 1 2
chr5:181237609|181238239 BCCIP 1 0 1
chr5:181237609|181238239 FTO 1 3 0
chr5:181237609|181238239 RBFOX2 8 4 8
chr5:181237609|181238239 SAFB2 6 3 5
chr5:181237609|181238239 RBM27 3 2 5
chr5:181237609|181238239 RBM22 3 4 4
chr5:181237609|181238239 AIFM1 3 1 3
chr5:181237609|181238239 AGO1 1 3 2
chr5:181237609|181238239 EIF4A3 7 10 5
chr5:181237609|181238239 AGO2 6 10 7
chr5:181237609|181238239 FAM120A 7 5 5
chr5:181237609|181238239 CNBP 1 2 1
chr5:181237609|181238239 UPF1 2 11 2
chr5:181237609|181238239 TAF15 13 11 7
chr5:181237609|181238239 ELAVL1 9 6 1
chr5:181237609|181238239 HNRNPU 2 6 6
chr5:181237609|181238239 HNRNPK 2 1 5
chr5:181237609|181238239 HNRNPM 5 5 3
chr5:181237609|181238239 HNRNPC 22 1 3
chr5:181237609|181238239 HNRNPD 0 1 0
chr5:181237609|181238239 LARP4B 2 5 2
chr5:181237609|181238239 SMNDC1 3 3 2
chr5:181237609|181238239 AUH 8 6 8
chr5:181237609|181238239 HNRNPA1 16 11 7
chr5:181237609|181238239 SND1 6 8 7
chr5:181237609|181238239 IGF2BP1 11 11 13
chr5:181237609|181238239 IGF2BP3 10 6 8
chr5:181237609|181238239 IGF2BP2 12 23 16
chr5:181237609|181238239 HNRNPUL1 5 7 9
chr5:181237609|181238239 TARDBP 4 3 4
chr5:181237609|181238239 YTHDC1 1 1 1
chr5:181237609|181238239 DICER1 1 2 3
chr5:181237609|181238239 RTCB 1 3 2
chr5:181237609|181238239 METTL3 1 0 0
chr5:181237609|181238239 TRA2A 7 3 7
chr5:181237609|181238239 FBL 8 11 4
chr5:181237609|181238239 RBM6 1 0 0
chr5:181237609|181238239 RBM5 0 2 1
chr5:181237609|181238239 NUMA1 5 3 4
chr5:181237609|181238239 SF3B4 4 4 0
chr5:181237609|181238239 FMR1 11 10 11
chr5:181237609|181238239 CPSF6 3 3 4
chr5:181237609|181238239 NOP58 8 7 5
chr5:181237609|181238239 NOP56 4 5 1
chr5:181237609|181238239 LSM11 4 3 4
chr5:181237609|181238239 HNRNPA2B1 4 7 10
chr5:181237609|181238239 YWHAG 3 2 4
chr5:181237609|181238239 ZC3H7B 1 1 1
chr5:181237609|181238239 SBDS 5 4 4
chr5:181237609|181238239 MSI2 3 2 5
chr5:181237609|181238239 MSI1 0 1 0
chr5:181237609|181238239 RBM10 10 6 0
chr5:181237609|181238239 NPM1 6 1 4
chr5:181237609|181238239 ALKBH5 1 0 0
chr5:181237609|181238239 TIA1 3 5 2
chr5:181237609|181238239 U2AF1 10 11 9
chr5:181237609|181238239 ILF3 2 2 4