CircRNA Information

General Information
circRNA Basic Information
CircID chr5:32087990|32088186
Strand -
CircType exon
Host Gene ENSG00000133401.14;
Algorism CIRI2;
Sequence TGTGAACAAAAACTTTCTGAGCAACTACTCTAGAAATTTTAGCAGTTTTCATGAAGACAGCACCTCCCTATCAGGCCTGGGTGACAGCACGGAGCCGTCTCTGTCATCCATGTATGGCGATGCTGAGGATTCTTCTTCTGACCCTGAGTCACTCACTGAAGCCCCACGAGCTTCTGCCAGGGACGGCTGGTCCCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:32087990|32088186 hsa-miR-375-5p 0 0 1
chr5:32087990|32088186 hsa-miR-375-3p 0 0 1
chr5:32087990|32088186 hsa-miR-433-5p 0 0 1
chr5:32087990|32088186 hsa-miR-433-3p 0 0 1
chr5:32087990|32088186 hsa-miR-510-5p 0 0 1
chr5:32087990|32088186 hsa-miR-510-3p 0 0 1
chr5:32087990|32088186 hsa-miR-561-5p 0 0 1
chr5:32087990|32088186 hsa-miR-561-3p 0 0 1
chr5:32087990|32088186 hsa-miR-570-5p 0 0 1
chr5:32087990|32088186 hsa-miR-570-3p 0 0 1
chr5:32087990|32088186 hsa-miR-626 0 0 1
chr5:32087990|32088186 hsa-miR-298 0 1 1
chr5:32087990|32088186 hsa-miR-1178-5p 0 0 1
chr5:32087990|32088186 hsa-miR-1178-3p 0 0 1
chr5:32087990|32088186 hsa-miR-548e-5p 0 0 1
chr5:32087990|32088186 hsa-miR-548e-3p 0 0 1
chr5:32087990|32088186 hsa-miR-1255a 0 0 1
chr5:32087990|32088186 hsa-miR-1266-5p 0 0 1
chr5:32087990|32088186 hsa-miR-1266-3p 0 0 1
chr5:32087990|32088186 hsa-miR-1321 0 1 1
chr5:32087990|32088186 hsa-miR-490-5p 0 0 1
chr5:32087990|32088186 hsa-miR-1244 0 0 1
chr5:32087990|32088186 hsa-miR-518d-5p 0 0 1
chr5:32087990|32088186 hsa-miR-519b-5p 0 0 1
chr5:32087990|32088186 hsa-miR-519c-5p 0 0 1
chr5:32087990|32088186 hsa-miR-520c-5p 0 0 1
chr5:32087990|32088186 hsa-miR-513a-3p 0 0 1
chr5:32087990|32088186 hsa-miR-548a-3p 0 0 1
chr5:32087990|32088186 hsa-miR-1255b 0 0 1
chr5:32087990|32088186 hsa-miR-548f 0 0 1
chr5:32087990|32088186 hsa-miR-526a 0 0 1
chr5:32087990|32088186 hsa-miR-1201 0 0 1
chr5:32087990|32088186 hsa-miR-623 1 0 0
chr5:32087990|32088186 hsa-miR-4489 1 0 0
chr5:32087990|32088186 hsa-miR-4518 0 1 0
chr5:32087990|32088186 hsa-miR-8073 0 1 0
chr5:32087990|32088186 hsa-miR-500b-3p 0 1 0
chr5:32087990|32088186 hsa-miR-6879-3p 0 1 0
chr5:32087990|32088186 hsa-miR-6825-5p 1 0 0
chr5:32087990|32088186 hsa-miR-6744-5p 0 1 0
chr5:32087990|32088186 hsa-miR-1292-5p 1 0 0
chr5:32087990|32088186 hsa-miR-2467-3p 1 0 0
chr5:32087990|32088186 hsa-miR-4640-5p 1 0 0
chr5:32087990|32088186 hsa-miR-3691-5p 0 1 0
chr5:32087990|32088186 hsa-miR-4756-3p 0 1 0
chr5:32087990|32088186 hsa-miR-6801-5p 0 1 0
chr5:32087990|32088186 hsa-miR-3605-3p 0 1 0
chr5:32087990|32088186 hsa-miR-6868-5p 0 1 0
chr5:32087990|32088186 hsa-miR-3675-5p 0 1 0
chr5:32087990|32088186 hsa-miR-4802-3p 0 1 0
chr5:32087990|32088186 hsa-miR-99a-3p 0 1 0
chr5:32087990|32088186 hsa-miR-3689a-3p 1 0 0
chr5:32087990|32088186 hsa-miR-6511a-5p 1 0 0
chr5:32087990|32088186 hsa-miR-3689d 0 1 0
chr5:32087990|32088186 hsa-miR-4756-5p 0 1 0
chr5:32087990|32088186 hsa-miR-99b-3p 0 1 0
chr5:32087990|32088186 hsa-miR-10393-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr5:32087990|32088186
ORF Type ORF1
Protein Length 60
Nucleotide Length 180
Protein Sequence MSNYSRNFSSFHEDSTSLSGLGDSTEPSLSSMYGDAEDSSSDPESLTEAPRASARDGWSP
Nucleotide Sequence CTGAGCAACTACTCTAGAAATTTTAGCAGTTTTCATGAAGACAGCACCTCCCTATCAGGCCTGGGTGACAGCACGGAGCCGTCTCTGTCATCCATGTATGGCGATGCTGAGGATTCTTCTTCTGACCCTGAGTCACTCACTGAAGCCCCACGAGCTTCTGCCAGGGACGGCTGGTCCCCT

CircID chr5:32087990|32088186
ORF Type ORF2
Protein Length 49
Nucleotide Length 147
Protein Sequence MKTAPPYQAWVTARSRLCHPCMAMLRILLLTLSHSLKPHELLPGTAGPL
Nucleotide Sequence ATGAAGACAGCACCTCCCTATCAGGCCTGGGTGACAGCACGGAGCCGTCTCTGTCATCCATGTATGGCGATGCTGAGGATTCTTCTTCTGACCCTGAGTCACTCACTGAAGCCCCACGAGCTTCTGCCAGGGACGGCTGGTCCCCTC

CircID chr5:32087990|32088186
ORF Type ORF3
Protein Length 43
Nucleotide Length 132
Protein Sequence MAEARGASVSDSGSEEESSASPYMDDRDGSVLSPRPDREVLSS
Nucleotide Sequence CTGGCAGAAGCTCGTGGGGCTTCAGTGAGTGACTCAGGGTCAGAAGAAGAATCCTCAGCATCGCCATACATGGATGACAGAGACGGCTCCGTGCTGTCACCCAGGCCTGATAGGGAGGTGCTGTCTTCATGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites