CircRNA Information

General Information
circRNA Basic Information
CircID chr5:32379115|32404097
Strand -
CircType exon
Host Gene ENSG00000056097.15;
Algorism find_circ;CIRI2;DCC;
Sequence ACTTATAAAGAACATTTAGAAGGACAGAAACATAAAAAAAAAGAAGCTGCATTGAAAGCCTCACAAAATACCAGCAGCAGCAACAGTTCTACTCGTGGGACTCAAAATCAGCTACGTTGTGAGCTCTGCGATGTGTCTTGTACAGGAGCAGATGCGTATGCTGCCCACATTCGTGGTGCTAAGCATCAGAAAGCTAGAGCTAATGGTCTGCAGTCCTGTGTGATTATCATACGCATTCTTCGAGACCTCTGTCAGCGAGTTCCAACTTGGTCTGATTTTCCAAGCTGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:32379115|32404097 hsa-miR-20a-3p 0 1 1
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr5:32379115|32404097 NOP56 1 3 0
chr5:32379115|32404097 MOV10 0 3 0
chr5:32379115|32404097 ELAVL1 14 17 3
chr5:32379115|32404097 SF3B4 1 0 1
chr5:32379115|32404097 CPSF7 1 7 0
chr5:32379115|32404097 YTHDF1 0 2 0
chr5:32379115|32404097 UPF1 1 0 0
chr5:32379115|32404097 SRSF10 0 2 0
chr5:32379115|32404097 TAF15 1 0 0
chr5:32379115|32404097 FMR1 0 10 13
chr5:32379115|32404097 CPSF6 0 10 0
chr5:32379115|32404097 NUDT21 2 6 0
chr5:32379115|32404097 CPSF3 1 0 0
chr5:32379115|32404097 CPSF1 1 0 0
chr5:32379115|32404097 FUS 1 5 0
chr5:32379115|32404097 DGCR8 0 1 0
chr5:32379115|32404097 QKI 4 0 2
chr5:32379115|32404097 SRSF1 1 2 1
chr5:32379115|32404097 NOP58 3 3 4
chr5:32379115|32404097 U2AF2 20 24 2
chr5:32379115|32404097 SRSF9 0 0 1
chr5:32379115|32404097 HNRNPU 1 0 0
chr5:32379115|32404097 DDX54 1 1 10
chr5:32379115|32404097 HNRNPL 4 2 0
chr5:32379115|32404097 FIP1L1 0 6 0
chr5:32379115|32404097 PTBP1 6 0 1
chr5:32379115|32404097 HNRNPC 24 26 1
chr5:32379115|32404097 HNRNPD 0 4 0
chr5:32379115|32404097 HNRNPA1 8 7 0
chr5:32379115|32404097 DDX3X 0 2 0
chr5:32379115|32404097 ZC3H7B 0 1 1
chr5:32379115|32404097 MSI2 1 0 0
chr5:32379115|32404097 ACIN1 0 0 1
chr5:32379115|32404097 SRSF7 0 0 1
chr5:32379115|32404097 LIN28B 0 0 1
chr5:32379115|32404097 FXR1 0 0 4
chr5:32379115|32404097 FXR2 0 2 3
chr5:32379115|32404097 SND1 0 0 1
chr5:32379115|32404097 IGF2BP1 0 0 7
chr5:32379115|32404097 BUD13 0 1 0
chr5:32379115|32404097 IGF2BP3 0 1 5
chr5:32379115|32404097 IGF2BP2 1 3 9
chr5:32379115|32404097 YTHDC1 0 2 0
chr5:32379115|32404097 TIAL1 0 1 0
chr5:32379115|32404097 KHSRP 0 2 0
chr5:32379115|32404097 DDX24 0 0 1
chr5:32379115|32404097 ATXN2 0 2 0
chr5:32379115|32404097 CSTF2T 2 8 2
chr5:32379115|32404097 CSTF2 3 27 0
chr5:32379115|32404097 YBX3 0 1 0
chr5:32379115|32404097 WDR33 2 5 0
chr5:32379115|32404097 PPIG 0 2 0
chr5:32379115|32404097 FBL 1 2 3
chr5:32379115|32404097 AGO1 0 0 1
chr5:32379115|32404097 EIF4A3 7 6 4
chr5:32379115|32404097 AGO2 1 0 4