CircNet

General Information

circRNA Basic Information

CircID	chr5:34757468\|34796027
Strand	+
CircType	exon
Host Gene	ENSG00000039560.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	TTTCCATCTTGCTGCTGCAAAAGGACACGTGGAATGCCTCAGGGTCATGATTACACATGGTGTGGATGTGACAGCCCAAGATACTACCG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:34757468\|34796027	hsa-miR-31-5p	0	0	1
chr5:34757468\|34796027	hsa-miR-31-3p	0	0	1
chr5:34757468\|34796027	hsa-miR-217-5p	0	0	1
chr5:34757468\|34796027	hsa-miR-217-3p	0	0	1
chr5:34757468\|34796027	hsa-miR-206	0	0	1
chr5:34757468\|34796027	hsa-miR-433-5p	0	0	1
chr5:34757468\|34796027	hsa-miR-433-3p	0	0	1
chr5:34757468\|34796027	hsa-miR-587	0	0	1
chr5:34757468\|34796027	hsa-miR-613	0	0	1
chr5:34757468\|34796027	hsa-miR-620	0	0	1
chr5:34757468\|34796027	hsa-miR-658	0	0	1
chr5:34757468\|34796027	hsa-miR-1227-5p	0	0	1
chr5:34757468\|34796027	hsa-miR-1227-3p	0	0	1
chr5:34757468\|34796027	hsa-miR-1205	0	0	1
chr5:34757468\|34796027	hsa-miR-1266-5p	0	0	1
chr5:34757468\|34796027	hsa-miR-1266-3p	0	0	1
chr5:34757468\|34796027	hsa-miR-1270	0	1	1
chr5:34757468\|34796027	hsa-miR-1272	0	1	1
chr5:34757468\|34796027	hsa-miR-1197	0	1	1
chr5:34757468\|34796027	hsa-miR-1825	0	0	1
chr5:34757468\|34796027	hsa-miR-187-3p	0	1	1
chr5:34757468\|34796027	hsa-miR-423-3p	0	0	1
chr5:34757468\|34796027	hsa-miR-509-3-5p	0	1	1
chr5:34757468\|34796027	hsa-miR-509-5p	0	1	1
chr5:34757468\|34796027	hsa-miR-542-3p	0	1	1
chr5:34757468\|34796027	hsa-miR-1	0	0	1
chr5:34757468\|34796027	hsa-miR-1183	1	1	0
chr5:34757468\|34796027	hsa-miR-3137	1	0	0
chr5:34757468\|34796027	hsa-miR-3154	0	1	0
chr5:34757468\|34796027	hsa-miR-3185	0	1	0
chr5:34757468\|34796027	hsa-miR-1268b	1	0	0
chr5:34757468\|34796027	hsa-miR-4518	0	1	0
chr5:34757468\|34796027	hsa-miR-4657	0	1	0
chr5:34757468\|34796027	hsa-miR-4669	1	0	0
chr5:34757468\|34796027	hsa-miR-4696	0	1	0
chr5:34757468\|34796027	hsa-miR-4706	1	0	0
chr5:34757468\|34796027	hsa-miR-4734	1	0	0
chr5:34757468\|34796027	hsa-miR-5192	1	0	0
chr5:34757468\|34796027	hsa-miR-5685	0	1	0
chr5:34757468\|34796027	hsa-miR-8080	0	1	0
chr5:34757468\|34796027	hsa-miR-12115	1	1	0
chr5:34757468\|34796027	hsa-miR-6747-5p	1	0	0
chr5:34757468\|34796027	hsa-miR-210-3p	1	0	0
chr5:34757468\|34796027	hsa-miR-6894-5p	1	1	0
chr5:34757468\|34796027	hsa-miR-7847-3p	1	0	0
chr5:34757468\|34796027	hsa-miR-3605-5p	0	1	0
chr5:34757468\|34796027	hsa-miR-6829-5p	1	0	0
chr5:34757468\|34796027	hsa-miR-1226-5p	0	1	0
chr5:34757468\|34796027	hsa-miR-4715-3p	0	1	0
chr5:34757468\|34796027	hsa-miR-3691-5p	1	1	0
chr5:34757468\|34796027	hsa-miR-4764-5p	0	1	0
chr5:34757468\|34796027	hsa-miR-4717-3p	1	1	0
chr5:34757468\|34796027	hsa-miR-6856-3p	0	1	0
chr5:34757468\|34796027	hsa-miR-335-3p	0	1	0
chr5:34757468\|34796027	hsa-miR-576-3p	0	1	0
chr5:34757468\|34796027	hsa-miR-548ao-3p	0	1	0
chr5:34757468\|34796027	hsa-miR-4763-3p	1	0	0
chr5:34757468\|34796027	hsa-miR-1237-5p	1	0	0
chr5:34757468\|34796027	hsa-miR-4745-5p	1	0	0
chr5:34757468\|34796027	hsa-miR-675-5p	1	1	0
chr5:34757468\|34796027	hsa-miR-6845-5p	0	1	0
chr5:34757468\|34796027	hsa-miR-1238-5p	0	1	0
chr5:34757468\|34796027	hsa-miR-4758-5p	1	0	0
chr5:34757468\|34796027	hsa-miR-6511b-5p	1	1	0
chr5:34757468\|34796027	hsa-miR-6891-5p	1	0	0
chr5:34757468\|34796027	hsa-miR-10394-5p	1	1	0
chr5:34757468\|34796027	hsa-miR-6811-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:34757468\|34796027
ORF Type	ORF1
Protein Length	50
Nucleotide Length	150
Protein Sequence	MQQQDGKRSCPHCRVWWHWPPSCRAVRPPSPHLHSPRPAVAGHHSCSTHW
Nucleotide Sequence	TTGCAGCAGCAAGATGGAAAGCGGTCTTGCCCTCACTGTCGTGTTTGGTGGCACTGGCCCCCTTCTTGCCGAGCAGTGAGGCCACCTTCTCCGCATCTCCATTCTCCACGGCCTGCAGTAGCCGGTCATCATTCTTGTTCCACTCATTGG

CircID	chr5:34757468\|34796027
ORF Type	ORF2
Protein Length	45
Nucleotide Length	138
Protein Sequence	MGCHIHTMCNHDPEAFHVSFCSSKMESGLALTVVFGGTGPLLAEQ
Nucleotide Sequence	TTGGGCTGTCACATCCACACCATGTGTAATCATGACCCTGAGGCATTCCACGTGTCCTTTTGCAGCAGCAAGATGGAAAGCGGTCTTGCCCTCACTGTCGTGTTTGGTGGCACTGGCCCCCTTCTTGCCGAGCAGTGA

CircID	chr5:34757468\|34796027
ORF Type	ORF3
Protein Length	59
Nucleotide Length	177
Protein Sequence	MTLRHSTCPFAAARWKAVLPSLSCLVALAPFLPSSEATFSASPFSTACSSRSSFLFHSL
Nucleotide Sequence	ATGACCCTGAGGCATTCCACGTGTCCTTTTGCAGCAGCAAGATGGAAAGCGGTCTTGCCCTCACTGTCGTGTTTGGTGGCACTGGCCCCCTTCTTGCCGAGCAGTGAGGCCACCTTCTCCGCATCTCCATTCTCCACGGCCTGCAGTAGCCGGTCATCATTCTTGTTCCACTCATTG

CircID	chr5:34757468\|34796027
ORF Type	ORF4
Protein Length	62
Nucleotide Length	186
Protein Sequence	MQAVENGDAEKVASLLGKKGASATKHDSEGKTAFHLAAAKGHVECLRVMITHGVDVTAQDTT
Nucleotide Sequence	CTGCAGGCCGTGGAGAATGGAGATGCGGAGAAGGTGGCCTCACTGCTCGGCAAGAAGGGGGCCAGTGCCACCAAACACGACAGTGAGGGCAAGACCGCTTTCCATCTTGCTGCTGCAAAAGGACACGTGGAATGCCTCAGGGTCATGATTACACATGGTGTGGATGTGACAGCCCAAGATACTACC

CircID	chr5:34757468\|34796027
ORF Type	ORF5
Protein Length	58
Nucleotide Length	177
Protein Sequence	MSGTRMMTGYCRPWRMEMRRRWPHCSARRGPVPPNTTVRARPLSILLLQKDTWNASGS
Nucleotide Sequence	ATGAGTGGAACAAGAATGATGACCGGCTACTGCAGGCCGTGGAGAATGGAGATGCGGAGAAGGTGGCCTCACTGCTCGGCAAGAAGGGGGCCAGTGCCACCAAACACGACAGTGAGGGCAAGACCGCTTTCCATCTTGCTGCTGCAAAAGGACACGTGGAATGCCTCAGGGTCATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:34757468\|34796027	AGGF1	0	5	0
chr5:34757468\|34796027	NOP56	1	0	0
chr5:34757468\|34796027	ELAVL1	1	5	0
chr5:34757468\|34796027	PRPF8	0	1	0
chr5:34757468\|34796027	UPF1	0	1	0
chr5:34757468\|34796027	TAF15	2	1	0
chr5:34757468\|34796027	CPSF7	0	1	0
chr5:34757468\|34796027	CPSF6	1	0	0
chr5:34757468\|34796027	NUDT21	1	0	0
chr5:34757468\|34796027	CSTF2	0	3	0
chr5:34757468\|34796027	DGCR8	1	0	0
chr5:34757468\|34796027	SRSF1	1	0	1
chr5:34757468\|34796027	NOP58	0	0	1
chr5:34757468\|34796027	TNRC6A	0	2	0
chr5:34757468\|34796027	U2AF2	2	11	0
chr5:34757468\|34796027	SRSF9	1	0	0
chr5:34757468\|34796027	ZNF622	2	0	0
chr5:34757468\|34796027	GRWD1	1	0	0
chr5:34757468\|34796027	HNRNPL	0	1	0
chr5:34757468\|34796027	HNRNPM	1	0	0
chr5:34757468\|34796027	PTBP1	4	1	1
chr5:34757468\|34796027	HNRNPC	1	7	0
chr5:34757468\|34796027	TRA2A	1	0	0
chr5:34757468\|34796027	HNRNPA1	0	3	0
chr5:34757468\|34796027	DDX3X	8	0	0
chr5:34757468\|34796027	ACIN1	1	2	3
chr5:34757468\|34796027	LIN28B	0	0	1
chr5:34757468\|34796027	LIN28A	0	0	1
chr5:34757468\|34796027	FXR2	0	1	0
chr5:34757468\|34796027	UCHL5	2	0	0
chr5:34757468\|34796027	GTF2F1	0	1	0
chr5:34757468\|34796027	IGF2BP2	1	6	3
chr5:34757468\|34796027	TARDBP	2	4	0
chr5:34757468\|34796027	BUD13	1	0	0
chr5:34757468\|34796027	DDX24	1	0	0
chr5:34757468\|34796027	CSTF2T	0	1	0
chr5:34757468\|34796027	TIA1	0	2	0
chr5:34757468\|34796027	TIAL1	0	1	0
chr5:34757468\|34796027	PPIG	1	0	0
chr5:34757468\|34796027	ATXN2	1	0	0
chr5:34757468\|34796027	ADAR	0	1	0
chr5:34757468\|34796027	EIF4A3	2	1	1
chr5:34757468\|34796027	AGO2	2	0	0

CircRNA Information