CircNet

General Information

circRNA Basic Information

CircID	chr5:37238857\|37239869
Strand	-
CircType	exon
Host Gene	ENSG00000197603.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	ATCATTGCCATACCATGTTCATTGGGCTCAACAAGACTGTCATCTCTGTAGTTTAATTCCTAAATGTGAATCAGTAAAGTCAAGAGGAGCTCTAATTTCTGCCTTTTCAAGAGATGGCCTTACCCTGGCAGTAACTCTTAATCAGAAAGACCCCAAGGCAACTCAGGTATTATTTATAAACACACTGAATTTTGTTACTCTCTGTGGTAGCCTTAAAGGATGTAGTAACAAGAGTCCCGTGGTTCCAGCTACACTTATTAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:37238857\|37239869	hsa-miR-10a-5p	0	0	1
chr5:37238857\|37239869	hsa-miR-10a-3p	0	0	1
chr5:37238857\|37239869	hsa-miR-10b-5p	0	0	1
chr5:37238857\|37239869	hsa-miR-10b-3p	0	0	1
chr5:37238857\|37239869	hsa-miR-34a-5p	0	0	1
chr5:37238857\|37239869	hsa-miR-34a-3p	0	0	1
chr5:37238857\|37239869	hsa-miR-340-5p	0	0	1
chr5:37238857\|37239869	hsa-miR-340-3p	0	0	1
chr5:37238857\|37239869	hsa-miR-335-5p	0	0	1
chr5:37238857\|37239869	hsa-miR-335-3p	0	0	1
chr5:37238857\|37239869	hsa-miR-449a	0	0	1
chr5:37238857\|37239869	hsa-miR-498-5p	0	0	1
chr5:37238857\|37239869	hsa-miR-498-3p	0	0	1
chr5:37238857\|37239869	hsa-miR-510-5p	0	0	1
chr5:37238857\|37239869	hsa-miR-510-3p	0	0	1
chr5:37238857\|37239869	hsa-miR-603	0	0	1
chr5:37238857\|37239869	hsa-miR-618	0	0	1
chr5:37238857\|37239869	hsa-miR-449b-5p	0	0	1
chr5:37238857\|37239869	hsa-miR-449b-3p	0	0	1
chr5:37238857\|37239869	hsa-miR-802	0	0	1
chr5:37238857\|37239869	hsa-miR-708-5p	0	0	1
chr5:37238857\|37239869	hsa-miR-708-3p	0	0	1
chr5:37238857\|37239869	hsa-miR-1206	0	0	1
chr5:37238857\|37239869	hsa-miR-1305	0	0	1
chr5:37238857\|37239869	hsa-miR-1257	0	0	1
chr5:37238857\|37239869	hsa-miR-1265	0	1	1
chr5:37238857\|37239869	hsa-miR-215-3p	0	1	1
chr5:37238857\|37239869	hsa-miR-28-5p	0	0	1
chr5:37238857\|37239869	hsa-miR-34c-5p	0	0	1
chr5:37238857\|37239869	hsa-miR-544	0	0	1
chr5:37238857\|37239869	hsa-miR-3139	0	1	0
chr5:37238857\|37239869	hsa-miR-4449	1	0	0
chr5:37238857\|37239869	hsa-miR-12115	1	0	0
chr5:37238857\|37239869	hsa-miR-6822-3p	1	0	0
chr5:37238857\|37239869	hsa-miR-6875-3p	1	0	0
chr5:37238857\|37239869	hsa-miR-874-3p	1	0	0
chr5:37238857\|37239869	hsa-miR-4743-3p	1	1	0
chr5:37238857\|37239869	hsa-miR-6868-5p	0	1	0
chr5:37238857\|37239869	hsa-miR-7159-5p	0	1	0
chr5:37238857\|37239869	hsa-miR-1343-5p	1	0	0
chr5:37238857\|37239869	hsa-miR-939-5p	1	0	0
chr5:37238857\|37239869	hsa-miR-6856-5p	1	0	0
chr5:37238857\|37239869	hsa-miR-10400-3p	0	1	0
chr5:37238857\|37239869	hsa-miR-200c-5p	0	1	0
chr5:37238857\|37239869	hsa-miR-7161-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:37238857\|37239869
ORF Type	ORF1
Protein Length	85
Nucleotide Length	255
Protein Sequence	LPYHVHWAQQDCHLCSLIPKCESVKSRGALISAFSRDGLTLAVTLNQKDPKATQVLFINTLNFVTLCGSLKGCSNKSPVVPATLI
Nucleotide Sequence	TTGCCATACCATGTTCATTGGGCTCAACAAGACTGTCATCTCTGTAGTTTAATTCCTAAATGTGAATCAGTAAAGTCAAGAGGAGCTCTAATTTCTGCCTTTTCAAGAGATGGCCTTACCCTGGCAGTAACTCTTAATCAGAAAGACCCCAAGGCAACTCAGGTATTATTTATAAACACACTGAATTTTGTTACTCTCTGTGGTAGCCTTAAAGGATGTAGTAACAAGAGTCCCGTGGTTCCAGCTACACTTATT

CircID	chr5:37238857\|37239869
ORF Type	ORF1
Protein Length	85
Nucleotide Length	255
Protein Sequence	MPYHVHWAQQDCHLCSLIPKCESVKSRGALISAFSRDGLTLAVTLNQKDPKATQVLFINTLNFVTLCGSLKGCSNKSPVVPATLI
Nucleotide Sequence	TTGCCATACCATGTTCATTGGGCTCAACAAGACTGTCATCTCTGTAGTTTAATTCCTAAATGTGAATCAGTAAAGTCAAGAGGAGCTCTAATTTCTGCCTTTTCAAGAGATGGCCTTACCCTGGCAGTAACTCTTAATCAGAAAGACCCCAAGGCAACTCAGGTATTATTTATAAACACACTGAATTTTGTTACTCTCTGTGGTAGCCTTAAAGGATGTAGTAACAAGAGTCCCGTGGTTCCAGCTACACTTATT

CircID	chr5:37238857\|37239869
ORF Type	ORF1
Protein Length	52
Nucleotide Length	159
Protein Sequence	MPYHVHWAQQDCHLCSLIPKCESVKSRGALISAFSRDGLTLAVTLNQKDPKY
Nucleotide Sequence	TTGCCATACCATGTTCATTGGGCTCAACAAGACTGTCATCTCTGTAGTTTAATTCCTAAATGTGAATCAGTAAAGTCAAGAGGAGCTCTAATTTCTGCCTTTTCAAGAGATGGCCTTACCCTGGCAGTAACTCTTAATCAGAAAGACCCCAAGTATTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:37238857\|37239869	NOP56	0	1	0
chr5:37238857\|37239869	ELAVL1	3	3	1
chr5:37238857\|37239869	DHX9	0	1	0
chr5:37238857\|37239869	CNBP	1	0	0
chr5:37238857\|37239869	UPF1	1	4	0
chr5:37238857\|37239869	CPSF7	1	0	1
chr5:37238857\|37239869	NUDT21	0	3	0
chr5:37238857\|37239869	CSTF2	2	1	0
chr5:37238857\|37239869	RBM15B	0	1	0
chr5:37238857\|37239869	FUS	1	0	0
chr5:37238857\|37239869	SRSF1	0	1	1
chr5:37238857\|37239869	NOP58	3	0	3
chr5:37238857\|37239869	U2AF1	1	0	1
chr5:37238857\|37239869	U2AF2	40	26	2
chr5:37238857\|37239869	DDX54	1	1	7
chr5:37238857\|37239869	RBM10	1	0	0
chr5:37238857\|37239869	MBNL1	1	0	0
chr5:37238857\|37239869	PTBP1	16	1	1
chr5:37238857\|37239869	HNRNPC	28	5	4
chr5:37238857\|37239869	ZNF184	1	0	0
chr5:37238857\|37239869	HNRNPA1	3	2	0
chr5:37238857\|37239869	DDX3X	0	1	0
chr5:37238857\|37239869	STAU1	0	2	0
chr5:37238857\|37239869	SMNDC1	0	0	1
chr5:37238857\|37239869	MSI2	1	0	0
chr5:37238857\|37239869	ACIN1	7	0	7
chr5:37238857\|37239869	IGF2BP2	1	6	2
chr5:37238857\|37239869	TARDBP	4	2	0
chr5:37238857\|37239869	YTHDC1	0	2	0
chr5:37238857\|37239869	CSTF2T	1	2	3
chr5:37238857\|37239869	VIM	2	0	0
chr5:37238857\|37239869	TARBP2	1	1	0
chr5:37238857\|37239869	TIAL1	1	2	0
chr5:37238857\|37239869	TIA1	0	1	0
chr5:37238857\|37239869	AGO2	0	0	1
chr5:37238857\|37239869	EIF4A3	2	1	4
chr5:37238857\|37239869	FBL	3	1	1

CircRNA Information