CircRNA Information

General Information
circRNA Basic Information
CircID chr5:37396912|37397088
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCACTGCAACCTCTATCTCCTGGGCCCAAATTATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACCACAGGTGCGCACCATAACACCCGTCTAATTTTTGCATTTTTGTAGAAACAGAGTTTCGCCATGTTGCCCAAGCTGGTTTTCAATTCCTGAGCTCAAGCGATCCGTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:37396912|37397088 hsa-miR-184 0 0 1
chr5:37396912|37397088 hsa-miR-510-5p 0 0 1
chr5:37396912|37397088 hsa-miR-510-3p 0 0 1
chr5:37396912|37397088 hsa-miR-570-5p 0 0 1
chr5:37396912|37397088 hsa-miR-570-3p 0 0 1
chr5:37396912|37397088 hsa-miR-584-5p 0 0 1
chr5:37396912|37397088 hsa-miR-584-3p 0 0 1
chr5:37396912|37397088 hsa-miR-609 0 0 1
chr5:37396912|37397088 hsa-miR-635 0 1 1
chr5:37396912|37397088 hsa-miR-675-5p 0 0 1
chr5:37396912|37397088 hsa-miR-675-3p 0 0 1
chr5:37396912|37397088 hsa-miR-665 1 1 1
chr5:37396912|37397088 hsa-miR-873-5p 0 0 1
chr5:37396912|37397088 hsa-miR-873-3p 0 0 1
chr5:37396912|37397088 hsa-miR-933 0 0 1
chr5:37396912|37397088 hsa-miR-512-5p 0 0 1
chr5:37396912|37397088 hsa-miR-296-5p 0 0 1
chr5:37396912|37397088 hsa-miR-1283 0 0 1
chr5:37396912|37397088 hsa-miR-485-5p 0 0 1
chr5:37396912|37397088 hsa-miR-483-5p 0 0 1
chr5:37396912|37397088 hsa-miR-1185 0 0 1
chr5:37396912|37397088 hsa-miR-638 1 0 0
chr5:37396912|37397088 hsa-miR-711 1 0 0
chr5:37396912|37397088 hsa-miR-3135a 1 0 0
chr5:37396912|37397088 hsa-miR-4281 1 0 0
chr5:37396912|37397088 hsa-miR-3929 0 1 0
chr5:37396912|37397088 hsa-miR-3937 1 0 0
chr5:37396912|37397088 hsa-miR-3945 1 0 0
chr5:37396912|37397088 hsa-miR-4437 1 1 0
chr5:37396912|37397088 hsa-miR-4478 0 1 0
chr5:37396912|37397088 hsa-miR-3689c 0 1 0
chr5:37396912|37397088 hsa-miR-4489 1 0 0
chr5:37396912|37397088 hsa-miR-4505 1 0 0
chr5:37396912|37397088 hsa-miR-4518 0 1 0
chr5:37396912|37397088 hsa-miR-4538 0 1 0
chr5:37396912|37397088 hsa-miR-4656 1 0 0
chr5:37396912|37397088 hsa-miR-4674 1 1 0
chr5:37396912|37397088 hsa-miR-4739 1 0 0
chr5:37396912|37397088 hsa-miR-5787 1 0 0
chr5:37396912|37397088 hsa-miR-6074 1 0 0
chr5:37396912|37397088 hsa-miR-6075 1 0 0
chr5:37396912|37397088 hsa-miR-6133 1 0 0
chr5:37396912|37397088 hsa-miR-6134 0 1 0
chr5:37396912|37397088 hsa-miR-12119 0 1 0
chr5:37396912|37397088 hsa-miR-196a-3p 0 1 0
chr5:37396912|37397088 hsa-miR-4433a-3p 1 0 0
chr5:37396912|37397088 hsa-miR-6765-5p 1 0 0
chr5:37396912|37397088 hsa-miR-7106-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6894-5p 1 1 0
chr5:37396912|37397088 hsa-miR-6854-5p 1 1 0
chr5:37396912|37397088 hsa-miR-6799-5p 1 0 0
chr5:37396912|37397088 hsa-miR-1227-5p 1 0 0
chr5:37396912|37397088 hsa-miR-4768-3p 0 1 0
chr5:37396912|37397088 hsa-miR-4695-5p 1 1 0
chr5:37396912|37397088 hsa-miR-6746-5p 1 1 0
chr5:37396912|37397088 hsa-miR-4722-5p 1 0 0
chr5:37396912|37397088 hsa-miR-7160-5p 0 1 0
chr5:37396912|37397088 hsa-miR-6741-5p 1 0 0
chr5:37396912|37397088 hsa-miR-127-3p 1 0 0
chr5:37396912|37397088 hsa-miR-6742-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6768-5p 1 0 0
chr5:37396912|37397088 hsa-miR-3180-3p 1 0 0
chr5:37396912|37397088 hsa-miR-6772-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6805-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6798-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6782-5p 1 0 0
chr5:37396912|37397088 hsa-miR-3150b-3p 1 0 0
chr5:37396912|37397088 hsa-miR-3934-3p 1 1 0
chr5:37396912|37397088 hsa-miR-5088-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6740-5p 1 0 0
chr5:37396912|37397088 hsa-miR-4640-5p 1 0 0
chr5:37396912|37397088 hsa-let-7d-5p 0 1 0
chr5:37396912|37397088 hsa-miR-6771-5p 1 0 0
chr5:37396912|37397088 hsa-let-7b-5p 0 1 0
chr5:37396912|37397088 hsa-miR-92b-5p 1 0 0
chr5:37396912|37397088 hsa-miR-149-3p 1 0 0
chr5:37396912|37397088 hsa-miR-146b-3p 0 1 0
chr5:37396912|37397088 hsa-miR-4740-5p 1 0 0
chr5:37396912|37397088 hsa-miR-7162-3p 0 1 0
chr5:37396912|37397088 hsa-miR-664b-5p 1 0 0
chr5:37396912|37397088 hsa-let-7c-5p 0 1 0
chr5:37396912|37397088 hsa-let-7e-5p 0 1 0
chr5:37396912|37397088 hsa-let-7a-5p 0 1 0
chr5:37396912|37397088 hsa-miR-6804-3p 0 1 0
chr5:37396912|37397088 hsa-miR-4804-5p 0 1 0
chr5:37396912|37397088 hsa-miR-4283 1 0 0
chr5:37396912|37397088 hsa-miR-3664-3p 0 1 0
chr5:37396912|37397088 hsa-miR-1233-5p 1 1 0
chr5:37396912|37397088 hsa-miR-1273h-5p 1 0 0
chr5:37396912|37397088 hsa-miR-3689b-3p 0 1 0
chr5:37396912|37397088 hsa-miR-6778-5p 1 1 0
chr5:37396912|37397088 hsa-miR-6812-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6737-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6752-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6756-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6769a-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6813-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6819-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6851-5p 1 0 0
chr5:37396912|37397088 hsa-miR-1249-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6722-3p 1 0 0
chr5:37396912|37397088 hsa-miR-6774-5p 1 1 0
chr5:37396912|37397088 hsa-miR-6779-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6780a-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6797-5p 1 0 0
chr5:37396912|37397088 hsa-miR-4728-5p 1 0 0
chr5:37396912|37397088 hsa-miR-3689a-3p 0 1 0
chr5:37396912|37397088 hsa-miR-4632-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6795-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6846-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6848-5p 1 1 0
chr5:37396912|37397088 hsa-miR-6883-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6887-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6831-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6845-5p 1 0 0
chr5:37396912|37397088 hsa-miR-1285-3p 1 1 0
chr5:37396912|37397088 hsa-miR-6773-5p 1 1 0
chr5:37396912|37397088 hsa-miR-4700-5p 1 0 0
chr5:37396912|37397088 hsa-miR-3679-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6785-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6849-5p 1 0 0
chr5:37396912|37397088 hsa-miR-6724-5p 1 1 0
chr5:37396912|37397088 hsa-miR-10400-3p 1 0 0
chr5:37396912|37397088 hsa-miR-6884-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr5:37396912|37397088
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MHFCRNRVSPCCPSWFSIPELKRSVH
Nucleotide Sequence TTGCATTTTTGTAGAAACAGAGTTTCGCCATGTTGCCCAAGCTGGTTTTCAATTCCTGAGCTCAAGCGATCCGTCCAC
CircID chr5:37396912|37397088
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MQPLSPGPKLSSHLSLLSSWDHRCAP
Nucleotide Sequence CTGCAACCTCTATCTCCTGGGCCCAAATTATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACCACAGGTGCGCACCATAA
CircID chr5:37396912|37397088
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MQKLDGCYGAHLWSQLLRRLRWEDNLGPGDRGCSE
Nucleotide Sequence ATGCAAAAATTAGACGGGTGTTATGGTGCGCACCTGTGGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATAATTTGGGCCCAGGAGATAGAGGTTGCAGTGAG
CircID chr5:37396912|37397088
ORF Type ORF4
Protein Length 39
Nucleotide Length 120
Protein Sequence MKTSLGNMAKLCFYKNAKIRRVLWCAPVVPATQEAEVGG
Nucleotide Sequence TTGAAAACCAGCTTGGGCAACATGGCGAAACTCTGTTTCTACAAAAATGCAAAAATTAGACGGGTGTTATGGTGCGCACCTGTGGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab