CircNet

General Information

circRNA Basic Information

CircID	chr5:38480208\|38480321
Strand	+
CircType	exon
Host Gene	ENSG00000113594.8;
Algorism	CIRI2;
Sequence	CCTTGTTTCTCATAAGCGATGTCTGGAGTGATTGTGGTTCTTGGAAAAGCAGAAGGAAAAACTAAAAAGTGTATCTTGTATTTTCCCTGCCCTCAGGTTGCCTATGTATTTTAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	targetScan
chr5:38480208\|38480321	hsa-miR-34b-5p	0	1
chr5:38480208\|38480321	hsa-miR-34b-3p	0	1
chr5:38480208\|38480321	hsa-miR-376c-5p	0	1
chr5:38480208\|38480321	hsa-miR-376c-3p	0	1
chr5:38480208\|38480321	hsa-miR-381-5p	0	1
chr5:38480208\|38480321	hsa-miR-381-3p	0	1
chr5:38480208\|38480321	hsa-miR-539-5p	0	1
chr5:38480208\|38480321	hsa-miR-539-3p	0	1
chr5:38480208\|38480321	hsa-miR-300	0	1
chr5:38480208\|38480321	hsa-miR-1237-5p	0	1
chr5:38480208\|38480321	hsa-miR-1237-3p	0	1
chr5:38480208\|38480321	hsa-miR-1248	0	1
chr5:38480208\|38480321	hsa-miR-508-5p	0	1
chr5:38480208\|38480321	hsa-miR-1207-5p	0	1
chr5:38480208\|38480321	hsa-miR-483-3p	0	1
chr5:38480208\|38480321	hsa-miR-548b-3p	0	1
chr5:38480208\|38480321	hsa-miR-6879-5p	1	0
chr5:38480208\|38480321	hsa-miR-328-5p	1	0
chr5:38480208\|38480321	hsa-miR-548ay-3p	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:38480208\|38480321
ORF Type	ORF1
Protein Length	32
Nucleotide Length	96
Protein Sequence	MSGVIVVLGKAEGKTKKCILYFPCPQVAYVFY
Nucleotide Sequence	ATGTCTGGAGTGATTGTGGTTCTTGGAAAAGCAGAAGGAAAAACTAAAAAGTGTATCTTGTATTTTCCCTGCCCTCAGGTTGCCTATGTATTTTAC

CircID	chr5:38480208\|38480321
ORF Type	ORF2
Protein Length	27
Nucleotide Length	81
Protein Sequence	MWFLEKQKEKLKSVSCIFPALRLPMYF
Nucleotide Sequence	TTGTGGTTCTTGGAAAAGCAGAAGGAAAAACTAAAAAGTGTATCTTGTATTTTCCCTGCCCTCAGGTTGCCTATGTATTTT

CircID	chr5:38480208\|38480321
ORF Type	ORF3
Protein Length	28
Nucleotide Length	87
Protein Sequence	MRAGKIQDTLFSFSFCFSKNHNHSRHRL
Nucleotide Sequence	CTGAGGGCAGGGAAAATACAAGATACACTTTTTAGTTTTTCCTTCTGCTTTTCCAAGAACCACAATCACTCCAGACATCGCTTATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information