CircNet

General Information

circRNA Basic Information

CircID	chr5:38493606\|38504121
Strand	-
CircType	exon
Host Gene	ENSG00000113594.9;
Algorism	find_circ;CIRI2;DCC;
Sequence	TTTATCCCCATACTCCTACTTCATTCAAAGTGAAGGATATTAATTCAACAGCTGTTAAACTTTCTTGGCATTTACCAGGCAACTTTGCAAAGATTAATTTTTTATGTGAAATTGAAATTAAGAAATCTAATTCAGTACAAGAGCAGCGGAATGTCACAATCAAAGGAGTAGAAAATTCAAGTTATCTTGTTGCTCTGGACAAGTTAAATCCATACACTCTATATACTTTTCGGATTCGTTGTTCTACTGAAACTTTCTGGAAATGGAGCAAATGGAGCAATAAAAAACAACATTTAACAACAGAAGCCAGTCCTTCAAAGGGGCCTGATACTTGGAGAGAGTGGAGTTCTGATGGAAAAAATTTAATAATCTATTGGAAGCCTTTACCCATTAATGAAGCTAATGGAAAAATACTTTCCTACAATGTATCGTGTTCATCAGATGAGGAAACACAGTCCCTTTCTGAAATCCCTGATCCTCAGCACAAAGCAGAGATACGACTTGATAAGAATGACTACATCATCAGCGTAGTGGCTAAAAATTCTGTGGGCTCATCACCACCTTCCAAAATAGCGAGTATGGAAATTCCAAATGTAAAATATCCTCCTTTCTTATTGAAGATGATCTCAAAATAGAACAAGTTGTTGGGATGGGAAAGGGGATTCTCCTCACCTGGCATTACGACCCCAACATGACTTGCGACTACGTCATTAAGTGGTGTAACTCGTCTCGGTCGGAACCATGCCTTATGGACTGGAGAAAAGTTCCCTCAAACAGCACTGAAACTGTAATAGAATCTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:38493606\|38504121	hsa-miR-134-3p	0	1	1
chr5:38493606\|38504121	hsa-miR-197-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:38493606\|38504121
ORF Type	ORF1
Protein Length	202
Nucleotide Length	606
Protein Sequence	VKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQRNVTIKGVENSSYLVALDKLNPYTLYTFRIRCSTETFWKWSKWSNKKQHLTTEASPSKGPDTWREWSSDGKNLIIYWKPLPINEANGKILSYNVSCSSDEETQSLSEIPDPQHKAEIRLDKNDYIISVVAKNSVGSSPPSKIASMEIPNVKYPPFLLKMISK*
Nucleotide Sequence	GTGAAGGATATTAATTCAACAGCTGTTAAACTTTCTTGGCATTTACCAGGCAACTTTGCAAAGATTAATTTTTTATGTGAAATTGAAATTAAGAAATCTAATTCAGTACAAGAGCAGCGGAATGTCACAATCAAAGGAGTAGAAAATTCAAGTTATCTTGTTGCTCTGGACAAGTTAAATCCATACACTCTATATACTTTTCGGATTCGTTGTTCTACTGAAACTTTCTGGAAATGGAGCAAATGGAGCAATAAAAAACAACATTTAACAACAGAAGCCAGTCCTTCAAAGGGGCCTGATACTTGGAGAGAGTGGAGTTCTGATGGAAAAAATTTAATAATCTATTGGAAGCCTTTACCCATTAATGAAGCTAATGGAAAAATACTTTCCTACAATGTATCGTGTTCATCAGATGAGGAAACACAGTCCCTTTCTGAAATCCCTGATCCTCAGCACAAAGCAGAGATACGACTTGATAAGAATGACTACATCATCAGCGTAGTGGCTAAAAATTCTGTGGGCTCATCACCACCTTCCAAAATAGCGAGTATGGAAATTCCAAATGTAAAATATCCTCCTTTCTTATTGAAGATGATCTCAAAATAG

CircID	chr5:38493606\|38504121
ORF Type	ORF2
Protein Length	55
Nucleotide Length	165
Protein Sequence	MPGEENPLSHPNNLFYFEIIFNKKGGYFTFGISILAILEGGDEPTEFLATTLMM*
Nucleotide Sequence	ATGCCAGGTGAGGAGAATCCCCTTTCCCATCCCAACAACTTGTTCTATTTTGAGATCATCTTCAATAAGAAAGGAGGATATTTTACATTTGGAATTTCCATACTCGCTATTTTGGAAGGTGGTGATGAGCCCACAGAATTTTTAGCCACTACGCTGATGATGTAG

CircID	chr5:38493606\|38504121
ORF Type	ORF3
Protein Length	50
Nucleotide Length	150
Protein Sequence	MGKGILLTWHYDPNMTCDYVIKWCNSSRSEPCLMDWRKVPSNSTETVIES
Nucleotide Sequence	ATGGGAAAGGGGATTCTCCTCACCTGGCATTACGACCCCAACATGACTTGCGACTACGTCATTAAGTGGTGTAACTCGTCTCGGTCGGAACCATGCCTTATGGACTGGAGAAAAGTTCCCTCAAACAGCACTGAAACTGTAATAGAATCT

CircID	chr5:38493606\|38504121
ORF Type	ORF4
Protein Length	46
Nucleotide Length	138
Protein Sequence	MKLMEKYFPTMYRVHQMRKHSPFLKSLILSTKQRYDLIRMTTSSA*
Nucleotide Sequence	ATGAAGCTAATGGAAAAATACTTTCCTACAATGTATCGTGTTCATCAGATGAGGAAACACAGTCCCTTTCTGAAATCCCTGATCCTCAGCACAAAGCAGAGATACGACTTGATAAGAATGACTACATCATCAGCGTAG

CircID	chr5:38493606\|38504121
ORF Type	ORF5
Protein Length	54
Nucleotide Length	162
Protein Sequence	LIVTFRCSCTELDFLISISHKKLIFAKLPGKCQESLTAVELISFTLNEVGVWG*
Nucleotide Sequence	TTGATTGTGACATTCCGCTGCTCTTGTACTGAATTAGATTTCTTAATTTCAATTTCACATAAAAAATTAATCTTTGCAAAGTTGCCTGGTAAATGCCAAGAAAGTTTAACAGCTGTTGAATTAATATCCTTCACTTTGAATGAAGTAGGAGTATGGGGATAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:38493606\|38504121	NOP56	0	0	1
chr5:38493606\|38504121	ELAVL1	5	2	3
chr5:38493606\|38504121	PRPF8	0	0	1
chr5:38493606\|38504121	YTHDF1	0	1	0
chr5:38493606\|38504121	UPF1	1	2	4
chr5:38493606\|38504121	FMR1	0	3	3
chr5:38493606\|38504121	NUDT21	0	0	1
chr5:38493606\|38504121	SAFB2	0	1	0
chr5:38493606\|38504121	FUS	2	2	0
chr5:38493606\|38504121	SRSF1	0	0	2
chr5:38493606\|38504121	NOP58	0	1	4
chr5:38493606\|38504121	U2AF1	0	0	2
chr5:38493606\|38504121	U2AF2	13	9	9
chr5:38493606\|38504121	SRSF9	0	0	1
chr5:38493606\|38504121	DDX54	0	0	7
chr5:38493606\|38504121	HNRNPA2B1	0	1	0
chr5:38493606\|38504121	FIP1L1	1	1	0
chr5:38493606\|38504121	PTBP1	9	5	4
chr5:38493606\|38504121	HNRNPC	35	6	0
chr5:38493606\|38504121	DHX9	0	1	0
chr5:38493606\|38504121	HNRNPA1	2	1	0
chr5:38493606\|38504121	DDX3X	0	4	0
chr5:38493606\|38504121	ZC3H7B	0	0	2
chr5:38493606\|38504121	ACIN1	6	0	18
chr5:38493606\|38504121	LIN28A	0	0	2
chr5:38493606\|38504121	SND1	0	0	1
chr5:38493606\|38504121	IGF2BP1	0	0	3
chr5:38493606\|38504121	IGF2BP3	0	0	3
chr5:38493606\|38504121	IGF2BP2	0	0	2
chr5:38493606\|38504121	TARDBP	4	1	0
chr5:38493606\|38504121	BUD13	0	0	2
chr5:38493606\|38504121	RBFOX2	1	0	0
chr5:38493606\|38504121	RBM47	0	0	4
chr5:38493606\|38504121	YTHDF2	1	0	1
chr5:38493606\|38504121	CSTF2T	1	0	0
chr5:38493606\|38504121	CSTF2	3	4	0
chr5:38493606\|38504121	WDR33	1	0	0
chr5:38493606\|38504121	FBL	0	0	2
chr5:38493606\|38504121	AGO1	0	0	1
chr5:38493606\|38504121	EIF4A3	3	7	11
chr5:38493606\|38504121	AGO2	0	0	2

CircRNA Information