CircRNA Information

General Information
circRNA Basic Information
CircID chr5:477723|478048
Strand +
CircType exon
Host Gene ENSG00000225138.6;
Algorism CIRI2;
Sequence ACCCGTGCCCCTGCCGGCCCTGGGGACCCTGACTCCAGCCATAAGCCCACTCTGCCCTGTGCTCCTGCACAACCTCATGCTCTCCAGGCCCTGCCATCAGGCGGGTGGGGTCTGAGGACACATAGGCGGCCCCACTTCCATCCTCTGGCACTCAGCTGTGTGGCTTCTGTGCCCCATCGGGCTCTGCTCCGTTCTCTACCTGATTCAGTTCTGGACATGAGGCCAATGGAGTTTTAGGGTCTCCTGCAGGGACAGAGACCACTTCAATGATTCTGCAGTATCAACACTTTCCCCAGACACATCCCAAGTCCCAGGCAGCTTTACCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:477723|478048 hsa-miR-22-5p 0 0 1
chr5:477723|478048 hsa-miR-22-3p 0 0 1
chr5:477723|478048 hsa-miR-198 1 1 1
chr5:477723|478048 hsa-miR-217-5p 0 0 1
chr5:477723|478048 hsa-miR-217-3p 0 0 1
chr5:477723|478048 hsa-miR-136-5p 0 0 1
chr5:477723|478048 hsa-miR-136-3p 0 0 1
chr5:477723|478048 hsa-miR-185-5p 0 0 1
chr5:477723|478048 hsa-miR-185-3p 0 0 1
chr5:477723|478048 hsa-miR-320a-5p 0 0 1
chr5:477723|478048 hsa-miR-320a-3p 0 0 1
chr5:477723|478048 hsa-miR-135b-5p 0 0 1
chr5:477723|478048 hsa-miR-135b-3p 0 0 1
chr5:477723|478048 hsa-miR-564 0 0 1
chr5:477723|478048 hsa-miR-573 0 1 1
chr5:477723|478048 hsa-miR-593-5p 0 0 1
chr5:477723|478048 hsa-miR-593-3p 0 0 1
chr5:477723|478048 hsa-miR-637 0 0 1
chr5:477723|478048 hsa-miR-661 1 1 1
chr5:477723|478048 hsa-miR-298 1 0 1
chr5:477723|478048 hsa-miR-1231 0 1 1
chr5:477723|478048 hsa-miR-1205 0 0 1
chr5:477723|478048 hsa-miR-548e-5p 0 0 1
chr5:477723|478048 hsa-miR-548e-3p 0 0 1
chr5:477723|478048 hsa-miR-1286 0 0 1
chr5:477723|478048 hsa-miR-486-3p 0 0 1
chr5:477723|478048 hsa-miR-1289 0 0 1
chr5:477723|478048 hsa-miR-1207-5p 1 1 1
chr5:477723|478048 hsa-miR-769-3p 0 0 1
chr5:477723|478048 hsa-miR-320b 0 0 1
chr5:477723|478048 hsa-miR-320c 0 0 1
chr5:477723|478048 hsa-miR-320d 0 0 1
chr5:477723|478048 hsa-miR-509-3-5p 0 0 1
chr5:477723|478048 hsa-miR-509-5p 0 1 1
chr5:477723|478048 hsa-miR-450b-3p 0 0 1
chr5:477723|478048 hsa-miR-548a-3p 0 0 1
chr5:477723|478048 hsa-miR-220c 0 0 1
chr5:477723|478048 hsa-miR-548f 0 0 1
chr5:477723|478048 hsa-miR-135a 0 0 1
chr5:477723|478048 hsa-miR-1254 0 0 1
chr5:477723|478048 hsa-miR-1201 0 0 1
chr5:477723|478048 hsa-miR-618 0 1 0
chr5:477723|478048 hsa-miR-663a 1 0 0
chr5:477723|478048 hsa-miR-658 1 0 0
chr5:477723|478048 hsa-miR-762 1 0 0
chr5:477723|478048 hsa-miR-1202 1 0 0
chr5:477723|478048 hsa-miR-1243 0 1 0
chr5:477723|478048 hsa-miR-1265 1 0 0
chr5:477723|478048 hsa-miR-2861 1 0 0
chr5:477723|478048 hsa-miR-3131 1 0 0
chr5:477723|478048 hsa-miR-3132 1 1 0
chr5:477723|478048 hsa-miR-4309 0 1 0
chr5:477723|478048 hsa-miR-4322 1 0 0
chr5:477723|478048 hsa-miR-3650 1 0 0
chr5:477723|478048 hsa-miR-3665 1 0 0
chr5:477723|478048 hsa-miR-3911 1 0 0
chr5:477723|478048 hsa-miR-3916 1 0 0
chr5:477723|478048 hsa-miR-3918 0 1 0
chr5:477723|478048 hsa-miR-1268b 1 0 0
chr5:477723|478048 hsa-miR-378g 1 0 0
chr5:477723|478048 hsa-miR-4430 0 1 0
chr5:477723|478048 hsa-miR-4450 1 0 0
chr5:477723|478048 hsa-miR-3135b 1 0 0
chr5:477723|478048 hsa-miR-3689c 1 0 0
chr5:477723|478048 hsa-miR-4481 1 1 0
chr5:477723|478048 hsa-miR-4498 0 1 0
chr5:477723|478048 hsa-miR-2392 1 1 0
chr5:477723|478048 hsa-miR-4525 1 0 0
chr5:477723|478048 hsa-miR-4534 1 0 0
chr5:477723|478048 hsa-miR-1587 1 0 0
chr5:477723|478048 hsa-miR-4539 1 0 0
chr5:477723|478048 hsa-miR-4656 1 0 0
chr5:477723|478048 hsa-miR-4658 0 1 0
chr5:477723|478048 hsa-miR-4663 1 0 0
chr5:477723|478048 hsa-miR-4669 1 0 0
chr5:477723|478048 hsa-miR-4672 1 1 0
chr5:477723|478048 hsa-miR-4674 1 0 0
chr5:477723|478048 hsa-miR-4688 1 0 0
chr5:477723|478048 hsa-miR-4739 1 0 0
chr5:477723|478048 hsa-miR-5090 1 1 0
chr5:477723|478048 hsa-miR-5192 1 0 0
chr5:477723|478048 hsa-miR-5572 1 0 0
chr5:477723|478048 hsa-miR-6079 1 0 0
chr5:477723|478048 hsa-miR-6081 1 1 0
chr5:477723|478048 hsa-miR-6086 1 1 0
chr5:477723|478048 hsa-miR-6132 1 1 0
chr5:477723|478048 hsa-miR-6133 1 0 0
chr5:477723|478048 hsa-miR-6860 1 0 0
chr5:477723|478048 hsa-miR-7150 1 1 0
chr5:477723|478048 hsa-miR-8075 0 1 0
chr5:477723|478048 hsa-miR-8077 1 1 0
chr5:477723|478048 hsa-miR-8089 1 1 0
chr5:477723|478048 hsa-miR-10226 1 0 0
chr5:477723|478048 hsa-miR-12120 1 0 0
chr5:477723|478048 hsa-miR-4433b-3p 1 0 0
chr5:477723|478048 hsa-miR-128-1-5p 1 0 0
chr5:477723|478048 hsa-miR-6840-3p 1 0 0
chr5:477723|478048 hsa-miR-504-3p 0 1 0
chr5:477723|478048 hsa-miR-6747-5p 1 0 0
chr5:477723|478048 hsa-miR-4433a-3p 1 0 0
chr5:477723|478048 hsa-miR-6861-5p 1 0 0
chr5:477723|478048 hsa-miR-7106-5p 1 0 0
chr5:477723|478048 hsa-miR-6894-5p 1 1 0
chr5:477723|478048 hsa-miR-27a-5p 0 1 0
chr5:477723|478048 hsa-miR-25-5p 1 0 0
chr5:477723|478048 hsa-miR-6799-5p 1 0 0
chr5:477723|478048 hsa-miR-6728-5p 1 0 0
chr5:477723|478048 hsa-miR-1236-5p 1 0 0
chr5:477723|478048 hsa-miR-3622a-5p 1 0 0
chr5:477723|478048 hsa-miR-5187-5p 1 0 0
chr5:477723|478048 hsa-miR-4768-3p 0 1 0
chr5:477723|478048 hsa-miR-6089 1 0 0
chr5:477723|478048 hsa-miR-6757-5p 1 0 0
chr5:477723|478048 hsa-miR-6880-5p 1 0 0
chr5:477723|478048 hsa-miR-4722-5p 1 1 0
chr5:477723|478048 hsa-miR-1301-3p 1 0 0
chr5:477723|478048 hsa-miR-7160-5p 1 0 0
chr5:477723|478048 hsa-miR-6890-5p 1 1 0
chr5:477723|478048 hsa-miR-6820-5p 1 0 0
chr5:477723|478048 hsa-miR-6741-5p 1 0 0
chr5:477723|478048 hsa-miR-6727-5p 1 0 0
chr5:477723|478048 hsa-miR-6842-3p 0 1 0
chr5:477723|478048 hsa-miR-6721-5p 1 1 0
chr5:477723|478048 hsa-miR-197-5p 1 1 0
chr5:477723|478048 hsa-miR-8069 1 0 0
chr5:477723|478048 hsa-miR-6776-5p 1 0 0
chr5:477723|478048 hsa-miR-6742-5p 1 0 0
chr5:477723|478048 hsa-miR-3605-5p 1 1 0
chr5:477723|478048 hsa-miR-6716-5p 1 0 0
chr5:477723|478048 hsa-miR-6871-5p 1 0 0
chr5:477723|478048 hsa-miR-6793-5p 1 1 0
chr5:477723|478048 hsa-miR-6827-5p 1 0 0
chr5:477723|478048 hsa-miR-23a-5p 0 1 0
chr5:477723|478048 hsa-miR-6798-5p 1 0 0
chr5:477723|478048 hsa-miR-2467-3p 1 0 0
chr5:477723|478048 hsa-miR-5006-5p 1 1 0
chr5:477723|478048 hsa-miR-6850-5p 1 0 0
chr5:477723|478048 hsa-miR-615-5p 1 1 0
chr5:477723|478048 hsa-miR-6786-5p 1 0 0
chr5:477723|478048 hsa-miR-1226-5p 1 0 0
chr5:477723|478048 hsa-miR-1909-5p 1 1 0
chr5:477723|478048 hsa-miR-1229-5p 1 0 0
chr5:477723|478048 hsa-miR-1908-3p 1 0 0
chr5:477723|478048 hsa-miR-4640-5p 1 0 0
chr5:477723|478048 hsa-miR-4732-5p 1 1 0
chr5:477723|478048 hsa-miR-6749-5p 1 0 0
chr5:477723|478048 hsa-miR-6847-5p 0 1 0
chr5:477723|478048 hsa-miR-6501-5p 1 0 0
chr5:477723|478048 hsa-miR-4743-5p 1 0 0
chr5:477723|478048 hsa-miR-4446-3p 0 1 0
chr5:477723|478048 hsa-miR-149-3p 1 0 0
chr5:477723|478048 hsa-miR-937-5p 1 1 0
chr5:477723|478048 hsa-miR-6824-5p 1 0 0
chr5:477723|478048 hsa-miR-6789-5p 1 0 0
chr5:477723|478048 hsa-miR-3925-5p 1 1 0
chr5:477723|478048 hsa-miR-3158-5p 1 0 0
chr5:477723|478048 hsa-miR-6781-5p 1 1 0
chr5:477723|478048 hsa-miR-4707-5p 1 0 0
chr5:477723|478048 hsa-miR-6832-5p 1 0 0
chr5:477723|478048 hsa-miR-1296-3p 1 0 0
chr5:477723|478048 hsa-miR-1227-3p 1 0 0
chr5:477723|478048 hsa-miR-3689b-3p 1 0 0
chr5:477723|478048 hsa-miR-4763-3p 1 1 0
chr5:477723|478048 hsa-miR-6769b-5p 1 0 0
chr5:477723|478048 hsa-miR-6812-5p 1 0 0
chr5:477723|478048 hsa-miR-6893-5p 1 0 0
chr5:477723|478048 hsa-miR-6775-5p 1 0 0
chr5:477723|478048 hsa-miR-5001-5p 1 0 0
chr5:477723|478048 hsa-miR-6737-5p 1 0 0
chr5:477723|478048 hsa-miR-6743-5p 1 1 0
chr5:477723|478048 hsa-miR-6752-5p 1 0 0
chr5:477723|478048 hsa-miR-6756-5p 1 0 0
chr5:477723|478048 hsa-miR-6803-5p 1 0 0
chr5:477723|478048 hsa-miR-6819-5p 1 0 0
chr5:477723|478048 hsa-miR-7107-5p 1 1 0
chr5:477723|478048 hsa-miR-7110-5p 1 0 0
chr5:477723|478048 hsa-miR-6722-3p 1 1 0
chr5:477723|478048 hsa-miR-6763-5p 1 0 0
chr5:477723|478048 hsa-miR-6797-5p 1 0 0
chr5:477723|478048 hsa-miR-6808-5p 1 0 0
chr5:477723|478048 hsa-miR-6879-5p 1 1 0
chr5:477723|478048 hsa-miR-1915-3p 0 1 0
chr5:477723|478048 hsa-miR-3620-5p 1 0 0
chr5:477723|478048 hsa-miR-5196-5p 1 0 0
chr5:477723|478048 hsa-miR-6780b-5p 1 0 0
chr5:477723|478048 hsa-miR-6836-5p 1 1 0
chr5:477723|478048 hsa-miR-10396a-5p 1 0 0
chr5:477723|478048 hsa-miR-10396b-5p 1 0 0
chr5:477723|478048 hsa-miR-1909-3p 1 1 0
chr5:477723|478048 hsa-miR-328-5p 1 0 0
chr5:477723|478048 hsa-miR-3689a-3p 1 0 0
chr5:477723|478048 hsa-miR-4632-5p 1 1 0
chr5:477723|478048 hsa-miR-4685-5p 1 1 0
chr5:477723|478048 hsa-miR-4725-3p 1 0 0
chr5:477723|478048 hsa-miR-4726-5p 1 0 0
chr5:477723|478048 hsa-miR-4745-5p 1 1 0
chr5:477723|478048 hsa-miR-6735-5p 1 1 0
chr5:477723|478048 hsa-miR-675-5p 1 0 0
chr5:477723|478048 hsa-miR-6846-5p 1 0 0
chr5:477723|478048 hsa-miR-6883-5p 1 0 0
chr5:477723|478048 hsa-miR-3187-5p 1 0 0
chr5:477723|478048 hsa-miR-6831-5p 1 1 0
chr5:477723|478048 hsa-miR-6885-5p 1 0 0
chr5:477723|478048 hsa-miR-939-5p 1 1 0
chr5:477723|478048 hsa-miR-1238-5p 1 0 0
chr5:477723|478048 hsa-miR-4758-5p 1 0 0
chr5:477723|478048 hsa-miR-365a-5p 1 0 0
chr5:477723|478048 hsa-miR-365b-5p 1 0 0
chr5:477723|478048 hsa-miR-6511b-5p 1 0 0
chr5:477723|478048 hsa-miR-3085-5p 1 0 0
chr5:477723|478048 hsa-miR-6731-5p 1 1 0
chr5:477723|478048 hsa-miR-7843-5p 0 1 0
chr5:477723|478048 hsa-miR-6855-5p 1 0 0
chr5:477723|478048 hsa-miR-4646-5p 1 0 0
chr5:477723|478048 hsa-miR-6785-5p 1 0 0
chr5:477723|478048 hsa-miR-4667-5p 1 1 0
chr5:477723|478048 hsa-miR-3184-5p 1 0 0
chr5:477723|478048 hsa-miR-6790-5p 1 0 0
chr5:477723|478048 hsa-miR-6791-5p 0 1 0
chr5:477723|478048 hsa-miR-550a-5p 1 0 0
chr5:477723|478048 hsa-miR-3529-5p 1 0 0
chr5:477723|478048 hsa-miR-10400-3p 1 0 0
chr5:477723|478048 hsa-miR-6837-5p 1 1 0
chr5:477723|478048 hsa-miR-10394-5p 0 1 0
chr5:477723|478048 hsa-miR-6848-3p 0 1 0
chr5:477723|478048 hsa-miR-6764-5p 0 1 0
chr5:477723|478048 hsa-miR-6807-3p 1 0 0
chr5:477723|478048 hsa-miR-6843-3p 0 1 0
chr5:477723|478048 hsa-miR-3927-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr5:477723|478048
ORF Type ORF1
Protein Length 61
Nucleotide Length 186
Protein Sequence MPCAPAQPHALQALPSGGWGLRTHRRPHFHPLALSCVASVPHRALLRSLPDSVLDMRPMEF
Nucleotide Sequence CTGCCCTGTGCTCCTGCACAACCTCATGCTCTCCAGGCCCTGCCATCAGGCGGGTGGGGTCTGAGGACACATAGGCGGCCCCACTTCCATCCTCTGGCACTCAGCTGTGTGGCTTCTGTGCCCCATCGGGCTCTGCTCCGTTCTCTACCTGATTCAGTTCTGGACATGAGGCCAATGGAGTTTTAG
CircID chr5:477723|478048
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MPALGTLTPAISPLCPVLLHNLMLSRPCHQAGGV
Nucleotide Sequence CTGCCGGCCCTGGGGACCCTGACTCCAGCCATAAGCCCACTCTGCCCTGTGCTCCTGCACAACCTCATGCTCTCCAGGCCCTGCCATCAGGCGGGTGGGGTCTGA
CircID chr5:477723|478048
ORF Type ORF3
Protein Length 47
Nucleotide Length 144
Protein Sequence MSRTESGRERSRARWGTEATQLSARGWKWGRLCVLRPHPPDGRAWRA
Nucleotide Sequence ATGTCCAGAACTGAATCAGGTAGAGAACGGAGCAGAGCCCGATGGGGCACAGAAGCCACACAGCTGAGTGCCAGAGGATGGAAGTGGGGCCGCCTATGTGTCCTCAGACCCCACCCGCCTGATGGCAGGGCCTGGAGAGCATGA
CircID chr5:477723|478048
ORF Type ORF4
Protein Length 33
Nucleotide Length 99
Protein Sequence MMAGPGEHEVVQEHRAEWAYGWSQGPQGRQGHG
Nucleotide Sequence CTGATGGCAGGGCCTGGAGAGCATGAGGTTGTGCAGGAGCACAGGGCAGAGTGGGCTTATGGCTGGAGTCAGGGTCCCCAGGGCCGGCAGGGGCACGGG
CircID chr5:477723|478048
ORF Type ORF5
Protein Length 37
Nucleotide Length 114
Protein Sequence MPGTWDVSGESVDTAESLKWSLSLQETLKLHWPHVQN
Nucleotide Sequence CTGCCTGGGACTTGGGATGTGTCTGGGGAAAGTGTTGATACTGCAGAATCATTGAAGTGGTCTCTGTCCCTGCAGGAGACCCTAAAACTCCATTGGCCTCATGTCCAGAACTGA
CircID chr5:477723|478048
ORF Type ORF6
Protein Length 26
Nucleotide Length 81
Protein Sequence MGHRSHTAECQRMEVGPPMCPQTPPA
Nucleotide Sequence ATGGGGCACAGAAGCCACACAGCTGAGTGCCAGAGGATGGAAGTGGGGCCGCCTATGTGTCCTCAGACCCCACCCGCCTGA
CircID chr5:477723|478048
ORF Type ORF7
Protein Length 29
Nucleotide Length 87
Protein Sequence MESMRLCRSTGQSGLMAGVRVPRAGRGTG
Nucleotide Sequence CTGGAGAGCATGAGGTTGTGCAGGAGCACAGGGCAGAGTGGGCTTATGGCTGGAGTCAGGGTCCCCAGGGCCGGCAGGGGCACGGGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab