CircNet

General Information

circRNA Basic Information

CircID	chr5:60488293\|60489674
Strand	+
CircType	exon
Host Gene	ENSG00000152931.7;
Algorism	CIRI2;
Sequence	CGAAGGCAGCAGCACTCAGGCGTTTGCTGCCGTGCCTGCCCTTTGGTTTCTGGGACGGCTCGGGTCCCGTAGCGCCGGCACAGCTGAGATTGCCAAGCCGGGAAGAGACCTTGCTCCAGGTGTAGCTGCGTTTTCCCCAGATCAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	targetScan
chr5:60488293\|60489674	hsa-miR-182-5p	0	1
chr5:60488293\|60489674	hsa-miR-182-3p	0	1
chr5:60488293\|60489674	hsa-miR-216a-5p	0	1
chr5:60488293\|60489674	hsa-miR-216a-3p	0	1
chr5:60488293\|60489674	hsa-miR-545-5p	0	1
chr5:60488293\|60489674	hsa-miR-545-3p	0	1
chr5:60488293\|60489674	hsa-miR-564	0	1
chr5:60488293\|60489674	hsa-miR-614	0	1
chr5:60488293\|60489674	hsa-miR-619-5p	0	1
chr5:60488293\|60489674	hsa-miR-619-3p	0	1
chr5:60488293\|60489674	hsa-miR-637	0	1
chr5:60488293\|60489674	hsa-miR-1236-5p	0	1
chr5:60488293\|60489674	hsa-miR-1236-3p	0	1
chr5:60488293\|60489674	hsa-miR-512-3p	0	1
chr5:60488293\|60489674	hsa-miR-615-3p	0	1
chr5:60488293\|60489674	hsa-miR-1207-3p	0	1
chr5:60488293\|60489674	hsa-miR-1469	1	0
chr5:60488293\|60489674	hsa-miR-3175	1	0
chr5:60488293\|60489674	hsa-miR-4498	1	0
chr5:60488293\|60489674	hsa-miR-4767	1	0
chr5:60488293\|60489674	hsa-miR-5047	1	0
chr5:60488293\|60489674	hsa-miR-6081	1	0
chr5:60488293\|60489674	hsa-miR-1301-3p	1	0
chr5:60488293\|60489674	hsa-miR-500a-3p	1	0
chr5:60488293\|60489674	hsa-miR-4725-3p	1	0
chr5:60488293\|60489674	hsa-miR-6724-5p	1	0
chr5:60488293\|60489674	hsa-miR-502-3p	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:60488293\|60489674
ORF Type	ORF1
Protein Length	32
Nucleotide Length	96
Protein Sequence	MGRLGSRSAGTAEIAKPGRDLAPGVAAFSPDH
Nucleotide Sequence	CTGGGACGGCTCGGGTCCCGTAGCGCCGGCACAGCTGAGATTGCCAAGCCGGGAAGAGACCTTGCTCCAGGTGTAGCTGCGTTTTCCCCAGATCAC

CircID	chr5:60488293\|60489674
ORF Type	ORF2
Protein Length	33
Nucleotide Length	102
Protein Sequence	MLPCLPFGFWDGSGPVAPAQLRLPSREETLLQV
Nucleotide Sequence	TTGCTGCCGTGCCTGCCCTTTGGTTTCTGGGACGGCTCGGGTCCCGTAGCGCCGGCACAGCTGAGATTGCCAAGCCGGGAAGAGACCTTGCTCCAGGTGTAG

CircID	chr5:60488293\|60489674
ORF Type	ORF3
Protein Length	26
Nucleotide Length	81
Protein Sequence	MAISAVPALRDPSRPRNQRAGTAANA
Nucleotide Sequence	TTGGCAATCTCAGCTGTGCCGGCGCTACGGGACCCGAGCCGTCCCAGAAACCAAAGGGCAGGCACGGCAGCAAACGCCTGA

CircID	chr5:60488293\|60489674
ORF Type	ORF4
Protein Length	46
Nucleotide Length	138
Protein Sequence	MGKTQLHLEQGLFPAWQSQLCRRYGTRAVPETKGQARQQTPECCCL
Nucleotide Sequence	CTGGGGAAAACGCAGCTACACCTGGAGCAAGGTCTCTTCCCGGCTTGGCAATCTCAGCTGTGCCGGCGCTACGGGACCCGAGCCGTCCCAGAAACCAAAGGGCAGGCACGGCAGCAAACGCCTGAGTGCTGCTGCCTT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information