CircNet

General Information

circRNA Basic Information

CircID	chr5:62550367\|62601848
Strand	+
CircType	exon
Host Gene	ENSG00000086200.16;
Algorism	find_circ;CIRI2;CIRC
Sequence	GTTGTGGAAAATGCCCTTAAAGTGAACCCAATACTAGGTCCACAAATGTTTCAACCGATTTTACCCTATGTTTTCAAGGGTATTATAGAAGGGGAGAGGTATCCTGTAGTGATGTCCACGTATCTTGGAGTTATGGGTCGAGTTCTACTACAAAACACTAGTTTTTTTTCTTCACTACTTAATGAGATGGCCCATAAATTTAATCAGGAGATGGACCAGCTTTTGGGAAATATGATTGAAATGTGGGTTGATCGAATGGACAACATTACCCAGCCTGAAAGAAGAAAACTTTCAGCTTTGGCTTTGCTCTCTCTTCTGCCATCTGATAATAGTGTTATCCAAGATAAATTCTGTGGGATTATAAACATTTCAGTAGAAGGCCTGCATGATGTCATGACGGAAGATCCTGAAACAGGAACTTATAAAGACTGTATGTTGATGTCTCATCTTGAGGAACCAAAAGTAACAGAAGATGAAGAACCACCCACAGAACAAGATAAGAGGAAAAAGATG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:62550367\|62601848	hsa-miR-218-1-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:62550367\|62601848
ORF Type	ORF1
Protein Length	156
Nucleotide Length	468
Protein Sequence	MFQPILPYVFKGIIEGERYPVVMSTYLGVMGRVLLQNTSFFSSLLNEMAHKFNQEMDQLLGNMIEMWVDRMDNITQPERRKLSALALLSLLPSDNSVIQDKFCGIINISVEGLHDVMTEDPETGTYKDCMLMSHLEEPKVTEDEEPPTEQDKRKKM
Nucleotide Sequence	ATGTTTCAACCGATTTTACCCTATGTTTTCAAGGGTATTATAGAAGGGGAGAGGTATCCTGTAGTGATGTCCACGTATCTTGGAGTTATGGGTCGAGTTCTACTACAAAACACTAGTTTTTTTTCTTCACTACTTAATGAGATGGCCCATAAATTTAATCAGGAGATGGACCAGCTTTTGGGAAATATGATTGAAATGTGGGTTGATCGAATGGACAACATTACCCAGCCTGAAAGAAGAAAACTTTCAGCTTTGGCTTTGCTCTCTCTTCTGCCATCTGATAATAGTGTTATCCAAGATAAATTCTGTGGGATTATAAACATTTCAGTAGAAGGCCTGCATGATGTCATGACGGAAGATCCTGAAACAGGAACTTATAAAGACTGTATGTTGATGTCTCATCTTGAGGAACCAAAAGTAACAGAAGATGAAGAACCACCCACAGAACAAGATAAGAGGAAAAAGATG

CircID	chr5:62550367\|62601848
ORF Type	ORF2
Protein Length	64
Nucleotide Length	192
Protein Sequence	MTSCRPSTEMFIIPQNLSWITLLSDGRRESKAKAESFLLSGWVMLSIRSTHISIIFPKSWSIS*
Nucleotide Sequence	ATGACATCATGCAGGCCTTCTACTGAAATGTTTATAATCCCACAGAATTTATCTTGGATAACACTATTATCAGATGGCAGAAGAGAGAGCAAAGCCAAAGCTGAAAGTTTTCTTCTTTCAGGCTGGGTAATGTTGTCCATTCGATCAACCCACATTTCAATCATATTTCCCAAAAGCTGGTCCATCTCCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:62550367\|62601848	NOP56	3	1	0
chr5:62550367\|62601848	MOV10	0	0	2
chr5:62550367\|62601848	ELAVL1	0	0	2
chr5:62550367\|62601848	FMR1	3	0	2
chr5:62550367\|62601848	FUS	2	1	0
chr5:62550367\|62601848	NOP58	4	1	6
chr5:62550367\|62601848	U2AF2	8	11	0
chr5:62550367\|62601848	SRSF9	0	0	1
chr5:62550367\|62601848	DDX54	0	0	14
chr5:62550367\|62601848	RBM10	0	1	0
chr5:62550367\|62601848	HNRNPL	3	0	0
chr5:62550367\|62601848	HNRNPD	1	0	0
chr5:62550367\|62601848	ZNF184	0	0	1
chr5:62550367\|62601848	ACIN1	0	1	0
chr5:62550367\|62601848	ZC3H7B	0	0	1
chr5:62550367\|62601848	LARP7	0	0	1
chr5:62550367\|62601848	SMNDC1	1	0	0
chr5:62550367\|62601848	MSI1	1	0	0
chr5:62550367\|62601848	HNRNPA1	1	0	0
chr5:62550367\|62601848	LIN28B	0	0	4
chr5:62550367\|62601848	FXR1	0	0	1
chr5:62550367\|62601848	FXR2	1	1	3
chr5:62550367\|62601848	IGF2BP1	0	0	1
chr5:62550367\|62601848	IGF2BP3	0	0	1
chr5:62550367\|62601848	IGF2BP2	3	1	8
chr5:62550367\|62601848	BUD13	0	0	1
chr5:62550367\|62601848	RBM47	0	0	1
chr5:62550367\|62601848	CSTF2T	0	0	2
chr5:62550367\|62601848	FBL	1	0	3
chr5:62550367\|62601848	EIF4A3	2	4	8
chr5:62550367\|62601848	AGO2	0	2	2

CircRNA Information