CircNet

General Information

circRNA Basic Information

CircID	chr5:65777427\|65812391
Strand	+
CircType	exon
Host Gene	ENSG00000123213.22;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAAACCTGTGATCTGGGGAAGATAAAACCTGAGGCCAGACGATACTTGGAAAAGTCAATTAAAATGGGGAAAAGAAATGGGCTCCATCTTCCTGAACAAGTACAGAATGAAAACACCATAATTTTGCAGCAGCTACTCCCACTGCGAACCAAGGTGGCCAAACTACTCGGTTATAGCACACATGCTGACTTCGTCCTTGAAATGAACACTGCAAAGAGCACAAGCCGCGTAACAGCCTTTCTAGGCACAAATATGCCAGCTACCTTTGGACATTTGGCAGGGGGATACGATGGCCAATATTATGGATATCTTTGGAGTGAAGTATTTTCCATGGATATGTTTTACAGCTGTTTTAAAAAAGAAGGGATAATGAATCCAGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:65777427\|65812391	hsa-miR-141-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:65777427\|65812391
ORF Type	ORF1
Protein Length	106
Nucleotide Length	318
Protein Sequence	MGKRNGLHLPEQVQNENTIILQQLLPLRTKVAKLLGYSTHADFVLEMNTAKSTSRVTAFLGTNMPATFGHLAGGYDGQYYGYLWSEVFSMDMFYSCFKKEGIMNPE
Nucleotide Sequence	ATGGGGAAAAGAAATGGGCTCCATCTTCCTGAACAAGTACAGAATGAAAACACCATAATTTTGCAGCAGCTACTCCCACTGCGAACCAAGGTGGCCAAACTACTCGGTTATAGCACACATGCTGACTTCGTCCTTGAAATGAACACTGCAAAGAGCACAAGCCGCGTAACAGCCTTTCTAGGCACAAATATGCCAGCTACCTTTGGACATTTGGCAGGGGGATACGATGGCCAATATTATGGATATCTTTGGAGTGAAGTATTTTCCATGGATATGTTTTACAGCTGTTTTAAAAAAGAAGGGATAATGAATCCAGAG

CircID	chr5:65777427\|65812391
ORF Type	ORF2
Protein Length	39
Nucleotide Length	117
Protein Sequence	MVFSFCTCSGRWSPFLFPILIDFSKYRLASGFIFPRSQV
Nucleotide Sequence	ATGGTGTTTTCATTCTGTACTTGTTCAGGAAGATGGAGCCCATTTCTTTTCCCCATTTTAATTGACTTTTCCAAGTATCGTCTGGCCTCAGGTTTTATCTTCCCCAGATCACAGGTT

CircID	chr5:65777427\|65812391
ORF Type	ORF3
Protein Length	64
Nucleotide Length	192
Protein Sequence	LCLERLLRGLCSLQCSFQGRSQHVCYNRVVWPPWFAVGVAAAKLWCFHSVLVQEDGAHFFSPF*
Nucleotide Sequence	TTGTGCCTAGAAAGGCTGTTACGCGGCTTGTGCTCTTTGCAGTGTTCATTTCAAGGACGAAGTCAGCATGTGTGCTATAACCGAGTAGTTTGGCCACCTTGGTTCGCAGTGGGAGTAGCTGCTGCAAAATTATGGTGTTTTCATTCTGTACTTGTTCAGGAAGATGGAGCCCATTTCTTTTCCCCATTTTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:65777427\|65812391	NOP56	0	1	0
chr5:65777427\|65812391	ELAVL1	0	0	1
chr5:65777427\|65812391	SF3B4	1	0	0
chr5:65777427\|65812391	FAM120A	0	0	1
chr5:65777427\|65812391	PRPF8	0	2	1
chr5:65777427\|65812391	UPF1	2	0	0
chr5:65777427\|65812391	TNRC6A	1	0	1
chr5:65777427\|65812391	FMR1	1	0	7
chr5:65777427\|65812391	CPSF6	0	0	4
chr5:65777427\|65812391	FUS	0	3	1
chr5:65777427\|65812391	SRSF1	1	0	1
chr5:65777427\|65812391	NOP58	0	0	1
chr5:65777427\|65812391	U2AF1	0	0	1
chr5:65777427\|65812391	U2AF2	5	2	0
chr5:65777427\|65812391	DDX54	0	0	4
chr5:65777427\|65812391	HNRNPK	0	4	0
chr5:65777427\|65812391	SF3A3	1	0	0
chr5:65777427\|65812391	PTBP1	2	0	3
chr5:65777427\|65812391	HNRNPC	2	2	0
chr5:65777427\|65812391	ZNF184	0	0	1
chr5:65777427\|65812391	DDX3X	1	0	2
chr5:65777427\|65812391	SMNDC1	0	0	1
chr5:65777427\|65812391	LIN28B	2	2	5
chr5:65777427\|65812391	FXR1	2	1	3
chr5:65777427\|65812391	FXR2	0	0	3
chr5:65777427\|65812391	IGF2BP2	0	1	5
chr5:65777427\|65812391	TARDBP	1	0	0
chr5:65777427\|65812391	TAF15	1	1	0
chr5:65777427\|65812391	BUD13	1	0	4
chr5:65777427\|65812391	RBFOX2	1	0	1
chr5:65777427\|65812391	SLTM	0	0	1
chr5:65777427\|65812391	TIA1	0	1	0
chr5:65777427\|65812391	RBM22	0	1	0
chr5:65777427\|65812391	FBL	0	1	0
chr5:65777427\|65812391	EIF4A3	1	1	5
chr5:65777427\|65812391	AGO2	0	1	2

CircRNA Information