CircRNA Information

General Information
circRNA Basic Information
CircID chr5:69168171|69168287
Strand -
CircType exon
Host Gene ENSG00000134057.13;
Algorism CIRI2;
Sequence AGGAAGCAAAACCTTCAGCTACTGGAAAAGTCATTGATAAAAAACTACCAAAACCTCTTGAAAAGGTACCTATGCTGGTGCCAGTGCCAGTGTCTGAGCCAGTGCCAGAGCCAGAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:69168171|69168287 hsa-miR-149-5p 0 0 1
chr5:69168171|69168287 hsa-miR-149-3p 0 0 1
chr5:69168171|69168287 hsa-miR-335-5p 0 0 1
chr5:69168171|69168287 hsa-miR-335-3p 0 0 1
chr5:69168171|69168287 hsa-miR-493-5p 0 0 1
chr5:69168171|69168287 hsa-miR-493-3p 0 0 1
chr5:69168171|69168287 hsa-miR-498-5p 0 0 1
chr5:69168171|69168287 hsa-miR-498-3p 0 0 1
chr5:69168171|69168287 hsa-miR-634 0 0 1
chr5:69168171|69168287 hsa-miR-892b 0 0 1
chr5:69168171|69168287 hsa-miR-760 0 1 1
chr5:69168171|69168287 hsa-miR-1226-5p 0 0 1
chr5:69168171|69168287 hsa-miR-1226-3p 0 0 1
chr5:69168171|69168287 hsa-miR-1305 0 0 1
chr5:69168171|69168287 hsa-miR-1324 0 0 1
chr5:69168171|69168287 hsa-miR-145-5p 0 0 1
chr5:69168171|69168287 hsa-miR-770-5p 0 0 1
chr5:69168171|69168287 hsa-miR-338-3p 0 0 1
chr5:69168171|69168287 hsa-miR-516a-3p 0 0 1
chr5:69168171|69168287 hsa-miR-24 0 0 1
chr5:69168171|69168287 hsa-miR-3166 0 1 0
chr5:69168171|69168287 hsa-miR-593-5p 0 1 0
chr5:69168171|69168287 hsa-miR-6757-3p 0 1 0
chr5:69168171|69168287 hsa-miR-5003-3p 0 1 0
chr5:69168171|69168287 hsa-miR-183-5p 0 1 0
chr5:69168171|69168287 hsa-miR-96-5p 0 1 0
chr5:69168171|69168287 hsa-miR-9851-3p 0 1 0
chr5:69168171|69168287 hsa-miR-5588-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr5:69168171|69168287
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MEKSLIKNYQNLLKRYLCWCQCQCLSQCQSQN
Nucleotide Sequence CTGGAAAAGTCATTGATAAAAAACTACCAAAACCTCTTGAAAAGGTACCTATGCTGGTGCCAGTGCCAGTGTCTGAGCCAGTGCCAGAGCCAGAAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab