CircNet

General Information

circRNA Basic Information

CircID	chr5:71495250\|71504751
Strand	+
CircType	exon
Host Gene	ENSG00000145734.18;
Algorism	find_circ;CIRI2;DCC;
Sequence	TAATCAACAAGATGCCACATCAGTAGCAACTGAGTCTTCAGAATCAAGCACTTCAGATTTGCCTTCATTCGAAGTTGGAATTAGAGCATTGTGTGAGGTGAATAATGCTGAGGGTAGTTGTATAGAAGAAAGAAATGTTGACCTAAAAAATAATTCACTAACCACGTGGAAAAAGATAAAATGAATACATTGGACATTTTGAGAATGGAGACTACAGAGAGAGAGAATCCAGAAGCTGAAACTGTATCTGTTTTGGGTGAAAAAAATTGTCTGCAGGAAGGGAGTCAACTAAAGGCTTTAAGACCTGTACAAGTGAGGGGCCGATTGCAAAAGCCAAAGCCAAATGCAGGTAAAGCTGCTGAAAGAAAAGAAATTCTCATATCACAGGAAGAAATTGGGGCCAATGTAGAGAAGAATGAAAATGAATCCTGTGCTGATAGAGATACTCCTCAACACATGGAAGATCAATCGCGTAAAGATTTTGAAGAGGAAGATGTCATATTACAGCCTGAGAAAAATGATTCTTTTCAAAATGTGCAGCCAGATGAGCCCAAGGTTCTTAATGAATGTCTAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:71495250\|71504751	hsa-miR-141-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:71495250\|71504751
ORF Type	ORF1
Protein Length	131
Nucleotide Length	393
Protein Sequence	MNTLDILRMETTERENPEAETVSVLGEKNCLQEGSQLKALRPVQVRGRLQKPKPNAGKAAERKEILISQEEIGANVEKNENESCADRDTPQHMEDQSRKDFEEEDVILQPEKNDSFQNVQPDEPKVLNECL
Nucleotide Sequence	ATGAATACATTGGACATTTTGAGAATGGAGACTACAGAGAGAGAGAATCCAGAAGCTGAAACTGTATCTGTTTTGGGTGAAAAAAATTGTCTGCAGGAAGGGAGTCAACTAAAGGCTTTAAGACCTGTACAAGTGAGGGGCCGATTGCAAAAGCCAAAGCCAAATGCAGGTAAAGCTGCTGAAAGAAAAGAAATTCTCATATCACAGGAAGAAATTGGGGCCAATGTAGAGAAGAATGAAAATGAATCCTGTGCTGATAGAGATACTCCTCAACACATGGAAGATCAATCGCGTAAAGATTTTGAAGAGGAAGATGTCATATTACAGCCTGAGAAAAATGATTCTTTTCAAAATGTGCAGCCAGATGAGCCCAAGGTTCTTAATGAATGTCTA

CircID	chr5:71495250\|71504751
ORF Type	ORF2
Protein Length	53
Nucleotide Length	159
Protein Sequence	MKMNPVLIEILLNTWKINRVKILKRKMSYYSLRKMILFKMCSQMSPRFLMNV*
Nucleotide Sequence	ATGAAAATGAATCCTGTGCTGATAGAGATACTCCTCAACACATGGAAGATCAATCGCGTAAAGATTTTGAAGAGGAAGATGTCATATTACAGCCTGAGAAAAATGATTCTTTTCAAAATGTGCAGCCAGATGAGCCCAAGGTTCTTAATGAATGTCTAA

CircID	chr5:71495250\|71504751
ORF Type	ORF3
Protein Length	95
Nucleotide Length	285
Protein Sequence	LTPFLQTIFFTQNRYSFSFWILSLCSLHSQNVQCIHFIFFHVVSELFFRSTFLSSIQLPSALFTSHNALIPTSNEGKSEVLDSEDSVATDVASC*
Nucleotide Sequence	TTGACTCCCTTCCTGCAGACAATTTTTTTCACCCAAAACAGATACAGTTTCAGCTTCTGGATTCTCTCTCTCTGTAGTCTCCATTCTCAAAATGTCCAATGTATTCATTTTATCTTTTTCCACGTGGTTAGTGAATTATTTTTTAGGTCAACATTTCTTTCTTCTATACAACTACCCTCAGCATTATTCACCTCACACAATGCTCTAATTCCAACTTCGAATGAAGGCAAATCTGAAGTGCTTGATTCTGAAGACTCAGTTGCTACTGATGTGGCATCTTGTTGA

CircID	chr5:71495250\|71504751
ORF Type	ORF4
Protein Length	39
Nucleotide Length	117
Protein Sequence	MSNVFILSFSTWLVNYFLGQHFFLLYNYPQHYSPHTML*
Nucleotide Sequence	ATGTCCAATGTATTCATTTTATCTTTTTCCACGTGGTTAGTGAATTATTTTTTAGGTCAACATTTCTTTCTTCTATACAACTACCCTCAGCATTATTCACCTCACACAATGCTCTAA

CircID	chr5:71495250\|71504751
ORF Type	ORF5
Protein Length	32
Nucleotide Length	96
Protein Sequence	MRISFLSAALPAFGFGFCNRPLTCTGLKAFS*
Nucleotide Sequence	ATGAGAATTTCTTTTCTTTCAGCAGCTTTACCTGCATTTGGCTTTGGCTTTTGCAATCGGCCCCTCACTTGTACAGGTCTTAAAGCCTTTAGTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:71495250\|71504751	NOP56	2	0	1
chr5:71495250\|71504751	ELAVL1	0	1	4
chr5:71495250\|71504751	PRPF8	0	1	1
chr5:71495250\|71504751	TAF15	1	0	0
chr5:71495250\|71504751	FMR1	0	0	3
chr5:71495250\|71504751	SRSF1	1	0	4
chr5:71495250\|71504751	NOP58	1	1	8
chr5:71495250\|71504751	U2AF1	0	2	1
chr5:71495250\|71504751	TNRC6A	0	1	0
chr5:71495250\|71504751	U2AF2	7	6	6
chr5:71495250\|71504751	DDX54	2	0	18
chr5:71495250\|71504751	RBM10	1	0	0
chr5:71495250\|71504751	HNRNPA2B1	0	0	1
chr5:71495250\|71504751	RBM22	0	1	0
chr5:71495250\|71504751	HNRNPC	3	3	0
chr5:71495250\|71504751	YWHAG	0	0	1
chr5:71495250\|71504751	KHSRP	0	1	0
chr5:71495250\|71504751	ZNF184	0	0	2
chr5:71495250\|71504751	SMNDC1	0	0	1
chr5:71495250\|71504751	MSI2	0	0	1
chr5:71495250\|71504751	HNRNPA1	0	0	2
chr5:71495250\|71504751	LIN28B	0	0	1
chr5:71495250\|71504751	FXR2	0	0	1
chr5:71495250\|71504751	BUD13	0	0	2
chr5:71495250\|71504751	IGF2BP2	1	2	11
chr5:71495250\|71504751	TARDBP	0	0	1
chr5:71495250\|71504751	DICER1	0	0	1
chr5:71495250\|71504751	RBFOX2	1	1	0
chr5:71495250\|71504751	CSTF2T	1	0	4
chr5:71495250\|71504751	SAFB2	0	0	3
chr5:71495250\|71504751	RNF219	1	0	0
chr5:71495250\|71504751	TRA2A	0	0	9
chr5:71495250\|71504751	EIF4A3	0	2	8
chr5:71495250\|71504751	FBL	3	1	4

CircRNA Information