CircRNA Information

General Information
circRNA Basic Information
CircID chr5:71658276|71658484
Strand +
CircType exon
Host Gene ENSG00000131844.14;
Algorism CIRI2;
Sequence AATATTAATGTTTATAGGAAAATGATGAGTTTATGACAAAGGAAGTAGATAGTGTTTTACAAGAGCATAGAGTAGGGAAGCTAATCCAGCACAGGGAGGTCACAGAGACATCCCTAAGGAAGTGGAGTTTAAACTGAGAGAAGCAAGTGCTTAAACTGAAGGATGTGTTGAAGAAGAAGGGAGAGTAGAACAATTTGGGCAGAGGGAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr5:71658276|71658484 hsa-miR-205-5p 0 0 1
chr5:71658276|71658484 hsa-miR-205-3p 0 0 1
chr5:71658276|71658484 hsa-miR-384 0 0 1
chr5:71658276|71658484 hsa-miR-593-5p 0 0 1
chr5:71658276|71658484 hsa-miR-593-3p 0 0 1
chr5:71658276|71658484 hsa-miR-643 0 0 1
chr5:71658276|71658484 hsa-miR-421 0 0 1
chr5:71658276|71658484 hsa-miR-889-5p 0 0 1
chr5:71658276|71658484 hsa-miR-889-3p 0 0 1
chr5:71658276|71658484 hsa-miR-942-5p 0 0 1
chr5:71658276|71658484 hsa-miR-942-3p 0 0 1
chr5:71658276|71658484 hsa-miR-1287-5p 0 0 1
chr5:71658276|71658484 hsa-miR-1287-3p 0 0 1
chr5:71658276|71658484 hsa-miR-1248 1 0 1
chr5:71658276|71658484 hsa-miR-339-5p 0 0 1
chr5:71658276|71658484 hsa-miR-337-3p 0 0 1
chr5:71658276|71658484 hsa-miR-324-3p 1 0 1
chr5:71658276|71658484 hsa-miR-1274a 0 0 1
chr5:71658276|71658484 hsa-miR-642 0 0 1
chr5:71658276|71658484 hsa-miR-1274b 0 0 1
chr5:71658276|71658484 hsa-miR-346 1 0 0
chr5:71658276|71658484 hsa-miR-1470 1 0 0
chr5:71658276|71658484 hsa-miR-1913 1 0 0
chr5:71658276|71658484 hsa-miR-4326 1 0 0
chr5:71658276|71658484 hsa-miR-103a-2-5p 1 0 0
chr5:71658276|71658484 hsa-miR-18a-3p 1 0 0
chr5:71658276|71658484 hsa-miR-6873-3p 1 0 0
chr5:71658276|71658484 hsa-miR-6728-3p 1 0 0
chr5:71658276|71658484 hsa-miR-7113-3p 1 0 0
chr5:71658276|71658484 hsa-miR-3191-5p 1 0 0
chr5:71658276|71658484 hsa-miR-6818-3p 1 0 0
chr5:71658276|71658484 hsa-miR-7111-3p 1 0 0
chr5:71658276|71658484 hsa-miR-6780a-3p 1 0 0
chr5:71658276|71658484 hsa-miR-6739-3p 1 0 0
chr5:71658276|71658484 hsa-miR-211-5p 1 0 0
chr5:71658276|71658484 hsa-miR-1237-3p 1 0 0
chr5:71658276|71658484 hsa-miR-1236-3p 1 0 0
chr5:71658276|71658484 hsa-miR-6889-3p 1 0 0
chr5:71658276|71658484 hsa-miR-6828-3p 1 0 0
chr5:71658276|71658484 hsa-miR-2276-5p 1 0 0
chr5:71658276|71658484 hsa-miR-1914-5p 1 0 0
chr5:71658276|71658484 hsa-miR-5088-3p 1 0 0
chr5:71658276|71658484 hsa-miR-6738-3p 1 0 0
chr5:71658276|71658484 hsa-miR-204-5p 1 0 0
chr5:71658276|71658484 hsa-miR-6767-3p 1 0 0
chr5:71658276|71658484 hsa-miR-4755-5p 1 0 0
chr5:71658276|71658484 hsa-miR-6893-3p 1 0 0
chr5:71658276|71658484 hsa-miR-6805-3p 1 0 0
chr5:71658276|71658484 hsa-miR-4723-3p 1 0 0
chr5:71658276|71658484 hsa-miR-6769b-3p 1 0 0
chr5:71658276|71658484 hsa-miR-5006-3p 1 0 0
chr5:71658276|71658484 hsa-miR-103a-1-5p 1 0 0
chr5:71658276|71658484 hsa-miR-6833-3p 1 0 0
chr5:71658276|71658484 hsa-miR-6874-3p 1 0 0
chr5:71658276|71658484 hsa-miR-3121-5p 1 0 0
chr5:71658276|71658484 hsa-miR-4699-3p 1 0 0
chr5:71658276|71658484 hsa-miR-302d-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr5:71658276|71658484
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MTKEVDSVLQEHRVGKLIQHREVTETSLRKWSLN
Nucleotide Sequence ATGACAAAGGAAGTAGATAGTGTTTTACAAGAGCATAGAGTAGGGAAGCTAATCCAGCACAGGGAGGTCACAGAGACATCCCTAAGGAAGTGGAGTTTAAACTGA

CircID chr5:71658276|71658484
ORF Type ORF2
Protein Length 65
Nucleotide Length 198
Protein Sequence MPKLFYSPFFFNTSFSLSTCFSQFKLHFLRDVSVTSLCWISFPTLCSCKTLSTSFVINSSFSYKH
Nucleotide Sequence CTGCCCAAATTGTTCTACTCTCCCTTCTTCTTCAACACATCCTTCAGTTTAAGCACTTGCTTCTCTCAGTTTAAACTCCACTTCCTTAGGGATGTCTCTGTGACCTCCCTGTGCTGGATTAGCTTCCCTACTCTATGCTCTTGTAAAACACTATCTACTTCCTTTGTCATAAACTCATCATTTTCCTATAAACATTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites