CircNet

General Information

circRNA Basic Information

CircID	chr5:72877228\|72889957
Strand	+
CircType	exon
Host Gene	ENSG00000083312.17;
Algorism	find_circ;CIRI2;DCC;
Sequence	TACATGCTACAGAGGACTCAAGATCAAGATGAAAATGTGGCTTTAGAAGCCTGTGAATTTTGGCTAACTTTAGCTGAACAGCCAATATGCAAAGATGTACTCGTAAGGCATCTTCCTAATCAGTGTATTTGGACGGTAAGGTTAAGCAAGGTGCGTCGTATCTTGCTTAACCTTGCCCTCGAAATACACTGATTAAATCCTTGAGGGGTACAGCATCACTCAGATTTTGTGTCCAATGGTCTCAGCAGGAAGATTGCTTTGAAATTTGGCACGAACCATGCCACTGTTTCCATGGGCCCAGATTACTCTGGCTTTGTTTAGTTTGCCGCCAGGAGTCTCTGTGTTGTTCTTTGTTTTATGTACATAAGCACATCTCTTGCCCAAAGAGAATTCTGTTTCACCTCATGCGTCAACATCTTCAATTTTAACAAGAGCTGTGTGTTTCCTTTGGTTCTGGAGACCCTGCTTTTAGCCAGCAGAAAAGGCCTTGGGCCACAGCCTTCCAGACATGTTGATTCCTGTGTTAGTGAATGGCATGAAGTACTCAGACATAGATATTATCCTACTTAAGGGTGATGTTGAAGAAGACGAAACGATTCCTGATAGTGAACAGGATATACGGCCACGTTTTCACCGATCGAGGACGGTGGCTCAGCAGCATGATGAAGATGGAATTGAAGAGGAAGATGATGATGATGATGAAATTGATGATGATGATACAATTTCTGACTGGAATCTAAGAAAATGTTCTGCTGCTGCCCTGGATGTTCTTGCAAATGTGTATCGTGATGAACTGCTGCCACATATTTTGCCCCTTTTGAAAGAATTACTTTTTCATCATGAATGGGTTGTTAAAGAATCAGGCATTTTGGTTTTAGGAGCAATTGCTGAAGGTTGCATGCAGGGCATGATTCCATACTTGCCTGAGCTTATTCCTCACCTTATTCAGTGCCTCTCTGATAAAAAGGCTCTTGTGCGTTCCATAACATGCTGGACTCTTAGCCGCTATGCACACTGGGTGGTCAGCCAGCCGCCAGACACGTACCTGAAGCCATTAATGACAGAATTGCTAAAGCGCATCCTGGACAGCAACAAGAGAGTACAAGAAGCTGCCTGCAGTGCCTTTGCTACCCTAGAAGAGGAGGCTTGTACAGAACTTGTTCCTTACCTTGCTTATATACTTGATACCCTGGTCTTTGCATTTAGTAAATACCAGCATAAGAACCTGCTCATTCTTTACGATGCCATAGGAACATTAGCAGATTCAGTAGGACATCATTTAAACAAACCA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr5:72877228\|72889957	hsa-miR-187-3p	1	1
chr5:72877228\|72889957	hsa-miR-93-3p	1	1
chr5:72877228\|72889957	hsa-miR-31-5p	1	1
chr5:72877228\|72889957	hsa-miR-218-2-3p	1	1
chr5:72877228\|72889957	hsa-miR-215-3p	1	1
chr5:72877228\|72889957	hsa-let-7c-3p	1	1
chr5:72877228\|72889957	hsa-miR-148a-5p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:72877228\|72889957
ORF Type	ORF1
Protein Length	261
Nucleotide Length	783
Protein Sequence	MLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDEDGIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKP
Nucleotide Sequence	ATGTTGATTCCTGTGTTAGTGAATGGCATGAAGTACTCAGACATAGATATTATCCTACTTAAGGGTGATGTTGAAGAAGACGAAACGATTCCTGATAGTGAACAGGATATACGGCCACGTTTTCACCGATCGAGGACGGTGGCTCAGCAGCATGATGAAGATGGAATTGAAGAGGAAGATGATGATGATGATGAAATTGATGATGATGATACAATTTCTGACTGGAATCTAAGAAAATGTTCTGCTGCTGCCCTGGATGTTCTTGCAAATGTGTATCGTGATGAACTGCTGCCACATATTTTGCCCCTTTTGAAAGAATTACTTTTTCATCATGAATGGGTTGTTAAAGAATCAGGCATTTTGGTTTTAGGAGCAATTGCTGAAGGTTGCATGCAGGGCATGATTCCATACTTGCCTGAGCTTATTCCTCACCTTATTCAGTGCCTCTCTGATAAAAAGGCTCTTGTGCGTTCCATAACATGCTGGACTCTTAGCCGCTATGCACACTGGGTGGTCAGCCAGCCGCCAGACACGTACCTGAAGCCATTAATGACAGAATTGCTAAAGCGCATCCTGGACAGCAACAAGAGAGTACAAGAAGCTGCCTGCAGTGCCTTTGCTACCCTAGAAGAGGAGGCTTGTACAGAACTTGTTCCTTACCTTGCTTATATACTTGATACCCTGGTCTTTGCATTTAGTAAATACCAGCATAAGAACCTGCTCATTCTTTACGATGCCATAGGAACATTAGCAGATTCAGTAGGACATCATTTAAACAAACCA

CircID	chr5:72877228\|72889957
ORF Type	ORF2
Protein Length	71
Nucleotide Length	213
Protein Sequence	MYISTSLAQREFCFTSCVNIFNFNKSCVFPLVLETLLLASRKGLGPQPSRHVDSCVSEWHEVLRHRYYPT*
Nucleotide Sequence	ATGTACATAAGCACATCTCTTGCCCAAAGAGAATTCTGTTTCACCTCATGCGTCAACATCTTCAATTTTAACAAGAGCTGTGTGTTTCCTTTGGTTCTGGAGACCCTGCTTTTAGCCAGCAGAAAAGGCCTTGGGCCACAGCCTTCCAGACATGTTGATTCCTGTGTTAGTGAATGGCATGAAGTACTCAGACATAGATATTATCCTACTTAA

CircID	chr5:72877228\|72889957
ORF Type	ORF3
Protein Length	63
Nucleotide Length	189
Protein Sequence	MLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPNQCIWTVRLSKVRRILLNLALEIH*
Nucleotide Sequence	ATGCTACAGAGGACTCAAGATCAAGATGAAAATGTGGCTTTAGAAGCCTGTGAATTTTGGCTAACTTTAGCTGAACAGCCAATATGCAAAGATGTACTCGTAAGGCATCTTCCTAATCAGTGTATTTGGACGGTAAGGTTAAGCAAGGTGCGTCGTATCTTGCTTAACCTTGCCCTCGAAATACACTGA

CircID	chr5:72877228\|72889957
ORF Type	ORF4
Protein Length	55
Nucleotide Length	165
Protein Sequence	MLKKTKRFLIVNRIYGHVFTDRGRWLSSMMKMELKRKMMMMMKLMMMIQFLTGI*
Nucleotide Sequence	ATGTTGAAGAAGACGAAACGATTCCTGATAGTGAACAGGATATACGGCCACGTTTTCACCGATCGAGGACGGTGGCTCAGCAGCATGATGAAGATGGAATTGAAGAGGAAGATGATGATGATGATGAAATTGATGATGATGATACAATTTCTGACTGGAATCTAA

CircID	chr5:72877228\|72889957
ORF Type	ORF5
Protein Length	33
Nucleotide Length	99
Protein Sequence	MLTHEVKQNSLWARDVLMYIKQRTTQRLLAAN*
Nucleotide Sequence	ATGTTGACGCATGAGGTGAAACAGAATTCTCTTTGGGCAAGAGATGTGCTTATGTACATAAAACAAAGAACAACACAGAGACTCCTGGCGGCAAACTAA

CircID	chr5:72877228\|72889957
ORF Type	ORF6
Protein Length	33
Nucleotide Length	99
Protein Sequence	MLLSHRPRSVKTWPYILFTIRNRFVFFNITLK*
Nucleotide Sequence	ATGCTGCTGAGCCACCGTCCTCGATCGGTGAAAACGTGGCCGTATATCCTGTTCACTATCAGGAATCGTTTCGTCTTCTTCAACATCACCCTTAAGTAG

CircID	chr5:72877228\|72889957
ORF Type	ORF7
Protein Length	30
Nucleotide Length	90
Protein Sequence	MPLFPWAQITLALFSLPPGVSVLFFVLCT*
Nucleotide Sequence	ATGCCACTGTTTCCATGGGCCCAGATTACTCTGGCTTTGTTTAGTTTGCCGCCAGGAGTCTCTGTGTTGTTCTTTGTTTTATGTACATAA

CircID	chr5:72877228\|72889957
ORF Type	ORF8
Protein Length	79
Nucleotide Length	237
Protein Sequence	VAAVHHDTHLQEHPGQQQNIFLDSSQKLYHHHQFHHHHHLPLQFHLHHAAEPPSSIGENVAVYPVHYQESFRLLQHHP*
Nucleotide Sequence	GTGGCAGCAGTTCATCACGATACACATTTGCAAGAACATCCAGGGCAGCAGCAGAACATTTTCTTAGATTCCAGTCAGAAATTGTATCATCATCATCAATTTCATCATCATCATCATCTTCCTCTTCAATTCCATCTTCATCATGCTGCTGAGCCACCGTCCTCGATCGGTGAAAACGTGGCCGTATATCCTGTTCACTATCAGGAATCGTTTCGTCTTCTTCAACATCACCCTTAA

CircID	chr5:72877228\|72889957
ORF Type	ORF9
Protein Length	76
Nucleotide Length	228
Protein Sequence	LRGTASLRFCVQWSQQEDCFEIWHEPCHCFHGPRLLWLCLVCRQESLCCSLFYVHKHISCPKRILFHLMRQHLQF*
Nucleotide Sequence	TTGAGGGGTACAGCATCACTCAGATTTTGTGTCCAATGGTCTCAGCAGGAAGATTGCTTTGAAATTTGGCACGAACCATGCCACTGTTTCCATGGGCCCAGATTACTCTGGCTTTGTTTAGTTTGCCGCCAGGAGTCTCTGTGTTGTTCTTTGTTTTATGTACATAAGCACATCTCTTGCCCAAAGAGAATTCTGTTTCACCTCATGCGTCAACATCTTCAATTTTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:72877228\|72889957	NOP56	0	1	3
chr5:72877228\|72889957	ELAVL1	1	2	9
chr5:72877228\|72889957	NUMA1	0	0	1
chr5:72877228\|72889957	SF3B1	0	0	1
chr5:72877228\|72889957	PRPF8	0	3	2
chr5:72877228\|72889957	TNRC6A	1	0	1
chr5:72877228\|72889957	CAPRIN1	0	4	1
chr5:72877228\|72889957	FMR1	2	9	29
chr5:72877228\|72889957	CPSF6	0	3	5
chr5:72877228\|72889957	NUDT21	0	1	2
chr5:72877228\|72889957	TIA1	1	0	0
chr5:72877228\|72889957	CPSF3	1	0	0
chr5:72877228\|72889957	RBM15B	0	2	0
chr5:72877228\|72889957	TROVE2	0	0	1
chr5:72877228\|72889957	FUS	2	2	3
chr5:72877228\|72889957	DGCR8	0	0	3
chr5:72877228\|72889957	SRSF7	0	1	1
chr5:72877228\|72889957	CPSF4	0	1	0
chr5:72877228\|72889957	SRSF1	4	2	13
chr5:72877228\|72889957	NOP58	4	3	11
chr5:72877228\|72889957	DHX9	1	0	0
chr5:72877228\|72889957	U2AF1	0	0	12
chr5:72877228\|72889957	U2AF2	14	9	14
chr5:72877228\|72889957	SRSF9	0	0	2
chr5:72877228\|72889957	HNRNPU	1	0	0
chr5:72877228\|72889957	DDX54	0	1	18
chr5:72877228\|72889957	LSM11	1	0	0
chr5:72877228\|72889957	HNRNPK	0	0	1
chr5:72877228\|72889957	PCBP2	0	0	2
chr5:72877228\|72889957	HNRNPM	0	0	1
chr5:72877228\|72889957	RBM15	0	1	0
chr5:72877228\|72889957	SF3A3	1	1	0
chr5:72877228\|72889957	HNRNPL	4	1	2
chr5:72877228\|72889957	PTBP1	2	0	8
chr5:72877228\|72889957	HNRNPC	2	4	5
chr5:72877228\|72889957	TRA2A	1	0	14
chr5:72877228\|72889957	KHSRP	0	3	0
chr5:72877228\|72889957	ZNF184	0	0	4
chr5:72877228\|72889957	ACIN1	0	0	2
chr5:72877228\|72889957	DDX3X	0	5	2
chr5:72877228\|72889957	ZC3H7B	0	1	1
chr5:72877228\|72889957	SMNDC1	4	0	0
chr5:72877228\|72889957	MSI2	0	0	4
chr5:72877228\|72889957	HNRNPA1	3	10	1
chr5:72877228\|72889957	RBM10	4	0	0
chr5:72877228\|72889957	RANGAP1	0	1	3
chr5:72877228\|72889957	LIN28A	0	0	2
chr5:72877228\|72889957	LIN28B	3	2	7
chr5:72877228\|72889957	FXR1	0	3	10
chr5:72877228\|72889957	FXR2	0	3	12
chr5:72877228\|72889957	SND1	0	0	7
chr5:72877228\|72889957	FIP1L1	0	1	0
chr5:72877228\|72889957	IGF2BP1	0	4	10
chr5:72877228\|72889957	GTF2F1	1	0	0
chr5:72877228\|72889957	IGF2BP3	0	1	10
chr5:72877228\|72889957	IGF2BP2	4	5	29
chr5:72877228\|72889957	TARDBP	2	0	2
chr5:72877228\|72889957	YTHDC1	0	3	1
chr5:72877228\|72889957	TAF15	3	5	1
chr5:72877228\|72889957	PRKRA	0	1	0
chr5:72877228\|72889957	BUD13	2	1	8
chr5:72877228\|72889957	RBFOX2	1	0	0
chr5:72877228\|72889957	RBM47	0	0	5
chr5:72877228\|72889957	SLTM	0	1	4
chr5:72877228\|72889957	EIF4G2	0	0	2
chr5:72877228\|72889957	DDX42	0	0	4
chr5:72877228\|72889957	CSTF2T	0	1	5
chr5:72877228\|72889957	BCCIP	0	2	1
chr5:72877228\|72889957	YWHAG	0	2	2
chr5:72877228\|72889957	YBX3	0	2	0
chr5:72877228\|72889957	XRN2	0	0	1
chr5:72877228\|72889957	AGO2	0	3	8
chr5:72877228\|72889957	ATXN2	0	2	0
chr5:72877228\|72889957	SRSF3	0	1	0
chr5:72877228\|72889957	EIF4A3	6	7	15
chr5:72877228\|72889957	FBL	2	0	4

CircRNA Information