CircNet

General Information

circRNA Basic Information

CircID	chr5:80678927\|80761678
Strand	+
CircType	exon
Host Gene	ENSG00000113318.9;
Algorism	find_circ;CIRI2;DCC;
Sequence	GGAGTGCAGCCTGCCACAGGCGAGGTTGTGTTTGATAGTTTCCAGGACTCTGCTTCTCGTTCAGAGCTAGAAACCCGGATGTCAAGCCTGCAGCCAGTAGAGCTGCTGCTTCCTTCGGCCTTGTCCGAGCAAACAGAGGCGCTCATCCACAGAGCCACATCTGTTAGGATGACAGAATTCGAGTCGAAAGGATGGATAACATTTATTTTGAATACAGCCATGCTTTCCAGGCAGTTACAGAGTTTTATGCAAAAGATACAGTTGACATCAAAGGTTCTCAAATTATTTCTGGCATTGTTAACTTAGAGAAGCCTGTGATTTGCTCTTTGGCTGCCATCATAAAATACCTCAAAGAATTCAACTTGGAAAAGATGCTCTCCAAACCTGAGGAAATAAATGCCCGGCTTGATGCTGTATCGGAAGTTCTCCATTCAGAATCTAGTGTGTTTGGTCAGATAGAAAATCATCTACGTAAATTGCCCGACATAGAGAGGGGACTCTGTAGCATTTATCACAAAAAA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:80678927\|80761678	hsa-miR-28-3p	0	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:80678927\|80761678
ORF Type	ORF1
Protein Length	110
Nucleotide Length	330
Protein Sequence	MDNIYFEYSHAFQAVTEFYAKDTVDIKGSQIISGIVNLEKPVICSLAAIIKYLKEFNLEKMLSKPEEINARLDAVSEVLHSESSVFGQIENHLRKLPDIERGLCSIYHKK
Nucleotide Sequence	ATGGATAACATTTATTTTGAATACAGCCATGCTTTCCAGGCAGTTACAGAGTTTTATGCAAAAGATACAGTTGACATCAAAGGTTCTCAAATTATTTCTGGCATTGTTAACTTAGAGAAGCCTGTGATTTGCTCTTTGGCTGCCATCATAAAATACCTCAAAGAATTCAACTTGGAAAAGATGCTCTCCAAACCTGAGGAAATAAATGCCCGGCTTGATGCTGTATCGGAAGTTCTCCATTCAGAATCTAGTGTGTTTGGTCAGATAGAAAATCATCTACGTAAATTGCCCGACATAGAGAGGGGACTCTGTAGCATTTATCACAAAAAA

CircID	chr5:80678927\|80761678
ORF Type	ORF2
Protein Length	76
Nucleotide Length	228
Protein Sequence	MSSLQPVELLLPSALSEQTEALIHRATSVRMTEFESKGWITFILNTAMLSRQLQSFMQKIQLTSKVLKLFLALLT*
Nucleotide Sequence	ATGTCAAGCCTGCAGCCAGTAGAGCTGCTGCTTCCTTCGGCCTTGTCCGAGCAAACAGAGGCGCTCATCCACAGAGCCACATCTGTTAGGATGACAGAATTCGAGTCGAAAGGATGGATAACATTTATTTTGAATACAGCCATGCTTTCCAGGCAGTTACAGAGTTTTATGCAAAAGATACAGTTGACATCAAAGGTTCTCAAATTATTTCTGGCATTGTTAACTTAG

CircID	chr5:80678927\|80761678
ORF Type	ORF3
Protein Length	73
Nucleotide Length	219
Protein Sequence	MAVFKINVIHPFDSNSVILTDVALWMSASVCSDKAEGSSSSTGCRLDIRVSSSEREAESWKLSNTTSPVAGCT
Nucleotide Sequence	ATGGCTGTATTCAAAATAAATGTTATCCATCCTTTCGACTCGAATTCTGTCATCCTAACAGATGTGGCTCTGTGGATGAGCGCCTCTGTTTGCTCGGACAAGGCCGAAGGAAGCAGCAGCTCTACTGGCTGCAGGCTTGACATCCGGGTTTCTAGCTCTGAACGAGAAGCAGAGTCCTGGAAACTATCAAACACAACCTCGCCTGTGGCAGGCTGCACT

CircID	chr5:80678927\|80761678
ORF Type	ORF4
Protein Length	43
Nucleotide Length	129
Protein Sequence	MENFRYSIKPGIYFLRFGEHLFQVEFFEVFYDGSQRANHRLL*
Nucleotide Sequence	ATGGAGAACTTCCGATACAGCATCAAGCCGGGCATTTATTTCCTCAGGTTTGGAGAGCATCTTTTCCAAGTTGAATTCTTTGAGGTATTTTATGATGGCAGCCAAAGAGCAAATCACAGGCTTCTCTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:80678927\|80761678	NOP56	0	2	0
chr5:80678927\|80761678	ELAVL1	0	0	1
chr5:80678927\|80761678	TAF15	1	1	0
chr5:80678927\|80761678	FMR1	1	0	4
chr5:80678927\|80761678	SRSF1	0	0	1
chr5:80678927\|80761678	NOP58	0	1	2
chr5:80678927\|80761678	U2AF1	4	0	4
chr5:80678927\|80761678	U2AF2	9	2	4
chr5:80678927\|80761678	SRSF9	1	0	0
chr5:80678927\|80761678	DDX54	0	0	8
chr5:80678927\|80761678	RBM10	1	1	0
chr5:80678927\|80761678	PTBP1	2	0	0
chr5:80678927\|80761678	HNRNPC	1	0	0
chr5:80678927\|80761678	HNRNPD	0	1	0
chr5:80678927\|80761678	MSI2	0	0	1
chr5:80678927\|80761678	HNRNPA1	1	0	0
chr5:80678927\|80761678	LIN28B	2	0	1
chr5:80678927\|80761678	FXR1	2	0	2
chr5:80678927\|80761678	FXR2	2	0	2
chr5:80678927\|80761678	IGF2BP1	0	0	1
chr5:80678927\|80761678	IGF2BP3	0	0	1
chr5:80678927\|80761678	IGF2BP2	1	0	6
chr5:80678927\|80761678	BUD13	1	0	0
chr5:80678927\|80761678	CSTF2T	0	0	2
chr5:80678927\|80761678	FBL	0	0	3
chr5:80678927\|80761678	ATXN2	1	0	0
chr5:80678927\|80761678	EWSR1	1	0	0
chr5:80678927\|80761678	EIF4A3	2	2	8
chr5:80678927\|80761678	AGO2	0	0	1

CircRNA Information