CircNet

General Information

circRNA Basic Information

CircID	chr5:83539702\|83539881
Strand	-
CircType	exon
Host Gene	ENSG00000038427.14;
Algorism	CIRI2;
Sequence	AAAACATTTTCCGAAAGGCATGAGACCAACAATTCAAGAGTCAGATACTGAGCTCTTATTCTCTGGACTGGGATCAGGAGAAGAAGTTTTACCTACTCTACCAACAGAGTCAGTGAATTTTACTGAAGTGGAACAAATCAATAACACATTATATCCCCACACTTCTCAAGTGGAAAGTAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:83539702\|83539881	hsa-miR-198	0	1	1
chr5:83539702\|83539881	hsa-miR-375-5p	0	0	1
chr5:83539702\|83539881	hsa-miR-375-3p	0	0	1
chr5:83539702\|83539881	hsa-miR-379-5p	0	0	1
chr5:83539702\|83539881	hsa-miR-379-3p	0	0	1
chr5:83539702\|83539881	hsa-miR-345-5p	0	0	1
chr5:83539702\|83539881	hsa-miR-345-3p	0	0	1
chr5:83539702\|83539881	hsa-miR-580-5p	0	0	1
chr5:83539702\|83539881	hsa-miR-580-3p	0	0	1
chr5:83539702\|83539881	hsa-miR-595	0	1	1
chr5:83539702\|83539881	hsa-miR-942-5p	0	0	1
chr5:83539702\|83539881	hsa-miR-942-3p	0	0	1
chr5:83539702\|83539881	hsa-miR-548e-5p	0	0	1
chr5:83539702\|83539881	hsa-miR-548e-3p	0	0	1
chr5:83539702\|83539881	hsa-miR-1253	0	0	1
chr5:83539702\|83539881	hsa-miR-1267	0	0	1
chr5:83539702\|83539881	hsa-miR-491-5p	0	0	1
chr5:83539702\|83539881	hsa-miR-525-5p	0	0	1
chr5:83539702\|83539881	hsa-miR-532-5p	0	0	1
chr5:83539702\|83539881	hsa-miR-520a-5p	0	0	1
chr5:83539702\|83539881	hsa-miR-455-3p	0	0	1
chr5:83539702\|83539881	hsa-miR-548a-3p	0	0	1
chr5:83539702\|83539881	hsa-miR-548f	0	0	1
chr5:83539702\|83539881	hsa-miR-1300	0	0	1
chr5:83539702\|83539881	hsa-miR-219-2-3p	0	0	1
chr5:83539702\|83539881	hsa-miR-3132	1	0	0
chr5:83539702\|83539881	hsa-miR-3919	0	1	0
chr5:83539702\|83539881	hsa-miR-4420	0	1	0
chr5:83539702\|83539881	hsa-miR-4522	0	1	0
chr5:83539702\|83539881	hsa-miR-6854-5p	0	1	0
chr5:83539702\|83539881	hsa-miR-1229-5p	1	0	0
chr5:83539702\|83539881	hsa-miR-574-5p	0	1	0
chr5:83539702\|83539881	hsa-miR-4778-3p	0	1	0
chr5:83539702\|83539881	hsa-miR-3151-3p	0	1	0
chr5:83539702\|83539881	hsa-miR-3670	0	1	0
chr5:83539702\|83539881	hsa-miR-4745-5p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:83539702\|83539881
ORF Type	ORF1
Protein Length	53
Nucleotide Length	159
Protein Sequence	MRPTIQESDTELLFSGLGSGEEVLPTLPTESVNFTEVEQINNTLYPHTSQVES
Nucleotide Sequence	ATGAGACCAACAATTCAAGAGTCAGATACTGAGCTCTTATTCTCTGGACTGGGATCAGGAGAAGAAGTTTTACCTACTCTACCAACAGAGTCAGTGAATTTTACTGAAGTGGAACAAATCAATAACACATTATATCCCCACACTTCTCAAGTGGAAAGT

CircID	chr5:83539702\|83539881
ORF Type	ORF2
Protein Length	35
Nucleotide Length	108
Protein Sequence	MICSTSVKFTDSVGRVGKTSSPDPSPENKSSVSDS
Nucleotide Sequence	TTGATTTGTTCCACTTCAGTAAAATTCACTGACTCTGTTGGTAGAGTAGGTAAAACTTCTTCTCCTGATCCCAGTCCAGAGAATAAGAGCTCAGTATCTGACTCTTGA

CircID	chr5:83539702\|83539881
ORF Type	ORF3
Protein Length	25
Nucleotide Length	75
Protein Sequence	MIPVQRIRAQYLTLELLVSCLSENV
Nucleotide Sequence	CTGATCCCAGTCCAGAGAATAAGAGCTCAGTATCTGACTCTTGAATTGTTGGTCTCATGCCTTTCGGAAAATGTT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information