CircNet

General Information

circRNA Basic Information

CircID	chr5:88225769\|88228528
Strand	-
CircType	exon
Host Gene	ENSG00000164180.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	TTTGAGGTGGTATCAACATCCTACAGAAGAAGAATTAAGAATTCTTGCAGGGAAACAACAAAAAGGGAAAACCAAAAAAGATAGGAAATATAATGGTCACATTGAAAGTAAGCCATTAACCATTCCAAAGGATATTGACCTTCATCTAGAAACAAAGTCAGTTACAGAAGTGGATACTTTAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr5:88225769\|88228528	hsa-miR-205-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr5:88225769\|88228528
ORF Type	ORF1
Protein Length	32
Nucleotide Length	96
Protein Sequence	MAYFQCDHYISYLFWFSLFVVSLQEFLILLL*
Nucleotide Sequence	ATGGCTTACTTTCAATGTGACCATTATATTTCCTATCTTTTTTGGTTTTCCCTTTTTGTTGTTTCCCTGCAAGAATTCTTAATTCTTCTTCTGTAG

CircID	chr5:88225769\|88228528
ORF Type	ORF2
Protein Length	60
Nucleotide Length	180
Protein Sequence	LRWYQHPTEEELRILAGKQQKGKTKKDRKYNGHIESKPLTIPKDIDLHLETKSVTEVDTL
Nucleotide Sequence	TTGAGGTGGTATCAACATCCTACAGAAGAAGAATTAAGAATTCTTGCAGGGAAACAACAAAAAGGGAAAACCAAAAAAGATAGGAAATATAATGGTCACATTGAAAGTAAGCCATTAACCATTCCAAAGGATATTGACCTTCATCTAGAAACAAAGTCAGTTACAGAAGTGGATACTTTA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr5:88225769\|88228528	U2AF2	6	4	0
chr5:88225769\|88228528	ELAVL1	1	2	0
chr5:88225769\|88228528	PRPF8	0	5	0
chr5:88225769\|88228528	UPF1	0	1	0
chr5:88225769\|88228528	FUS	2	0	1
chr5:88225769\|88228528	DGCR8	2	0	1
chr5:88225769\|88228528	SRSF1	0	1	0
chr5:88225769\|88228528	NOP58	1	1	3
chr5:88225769\|88228528	NOP56	2	0	0
chr5:88225769\|88228528	DDX54	0	1	3
chr5:88225769\|88228528	RBM10	1	0	0
chr5:88225769\|88228528	HNRNPC	0	1	0
chr5:88225769\|88228528	TRA2A	1	0	1
chr5:88225769\|88228528	ZNF184	0	0	1
chr5:88225769\|88228528	DDX3X	1	0	0
chr5:88225769\|88228528	IGF2BP1	0	0	1
chr5:88225769\|88228528	IGF2BP2	0	1	2
chr5:88225769\|88228528	BUD13	0	1	4
chr5:88225769\|88228528	RBFOX2	1	1	0
chr5:88225769\|88228528	SLTM	0	0	1
chr5:88225769\|88228528	TARBP2	0	1	0
chr5:88225769\|88228528	EIF4A3	7	1	3
chr5:88225769\|88228528	FBL	1	1	2

CircRNA Information